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WB:C40H5.5b

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Contents

Species (Taxon ID) Caenorhabditis elegans (nematode) (taxon:6239)
Gene Name(s) C40H5.5b ( synonyms: C40H5.5 )
Protein Name(s) No Information Provided.
External Links
WB WBGene00006654

Annotations

Qualifier GO ID GO term name Reference(s) Evidence Code with/from Aspect Notes Status
GO:0003677

DNA binding

PMID:12520011[1]
PMID:12654719[2]

IEA: Inferred from Electronic Annotation

INTERPRO:IPR012287

F

From WB

GO:0003700

sequence-specific DNA binding transcription factor activity

PMID:12520011[1]
PMID:12654719[2]

IEA: Inferred from Electronic Annotation

INTERPRO:IPR001356

F

From WB

GO:0003700

sequence-specific DNA binding transcription factor activity

WB:WBPaper00002876
PMID:9292724[3]

ISS: Inferred from Sequence or Structural Similarity

UniProtKB:P50458

F

From WB

GO:0005634

nucleus

PMID:12520011[1]
PMID:12654719[2]

IEA: Inferred from Electronic Annotation

INTERPRO:IPR017970

C

From WB

GO:0005634

nucleus

WB:WBPaper00002876
PMID:9292724[3]

ISS: Inferred from Sequence or Structural Similarity

UniProtKB:P29673

C

From WB

GO:0006355

regulation of transcription, DNA-dependent

PMID:12520011[1]
PMID:12654719[2]

IEA: Inferred from Electronic Annotation

INTERPRO:IPR001356

P

From WB

GO:0006355

regulation of transcription, DNA-dependent

PMID:12520011[1]
PMID:12654719[2]

IEA: Inferred from Electronic Annotation

INTERPRO:IPR017970

P

From WB

GO:0007409

axonogenesis

WB:WBPaper00002876
PMID:9292724[3]

IMP: Inferred from Mutant Phenotype

WB:WBVar00088276

P

From WB

GO:0008270

zinc ion binding

PMID:12520011[1]
PMID:12654719[2]

IEA: Inferred from Electronic Annotation

INTERPRO:IPR001781

F

From WB

GO:0008306

associative learning

WB:WBPaper00005300
PMID:12062106[4]

IMP: Inferred from Mutant Phenotype

WB:WBVar00088915
WB:WBVar00094785
WB:WBVar00094786

P

From WB

GO:0008355

olfactory learning

WB:WBPaper00026662
PMID:16051801[5]

IMP: Inferred from Mutant Phenotype

WB:WBVar00088276
WB:WBVar00094785

P

From WB

GO:0009408

response to heat

WB:WBPaper00031874
PMID:18467592[6]

IMP: Inferred from Mutant Phenotype

WB:WBVar00088276
WB:WBPhenotype:0001273

P

From WB

GO:0022401

negative adaptation of signaling pathway

WB:WBPaper00025243
PMID:15938711[7]

IMP: Inferred from Mutant Phenotype

WB:WBVar00088276
WB:WBVar00088915
WB:WBVar00094785
WB:WBVar00094786

P

From WB

GO:0030528

transcription regulator activity

PMID:12520011[1]
PMID:12654719[2]

IEA: Inferred from Electronic Annotation

INTERPRO:IPR017970

F

From WB

GO:0040010

positive regulation of growth rate

WB:WBPaper00031036
PMID:17897480[8]

IMP: Inferred from Mutant Phenotype

WB:WBRNAi00067793
WB:WBPhenotype:0000031

P

From WB

GO:0040024

dauer larval development

WB:WBPaper00002876
PMID:9292724[3]

IGI: Inferred from Genetic Interaction

WB:WBGene00000903

P

From WB

GO:0040040

thermosensory behavior

WB:WBPaper00005148
PMID:11879652[9]

IGI: Inferred from Genetic Interaction

WB:WBGene00006527

P

From WB

GO:0040040

thermosensory behavior

WB:WBPaper00005148
PMID:11879652[9]

IMP: Inferred from Mutant Phenotype

WB:WBVar00088276

P

From WB

GO:0040040

thermosensory behavior

WB:WBPaper00006343
PMID:14711416[10]

IMP: Inferred from Mutant Phenotype

WB:WBVar00088276

P

From WB

GO:0043052

thermotaxis

WB:WBPaper00002876
PMID:9292724[3]

IMP: Inferred from Mutant Phenotype

WB:WBVar00088276

P

From WB

GO:0043052

thermotaxis

WB:WBPaper00005148
PMID:11879652[9]

IGI: Inferred from Genetic Interaction

WB:WBGene00006527

P

From WB

GO:0043052

thermotaxis

WB:WBPaper00005148
PMID:11879652[9]

IMP: Inferred from Mutant Phenotype

WB:WBVar00088276

P

From WB

GO:0043193

positive regulation of gene-specific transcription

WB:WBPaper00002876
PMID:9292724[3]

IMP: Inferred from Mutant Phenotype

WB:WBVar00088276

P

From WB

GO:0043565

sequence-specific DNA binding

PMID:12520011[1]
PMID:12654719[2]

IEA: Inferred from Electronic Annotation

INTERPRO:IPR001356

F

From WB

GO:0043565

sequence-specific DNA binding

PMID:12520011[1]
PMID:12654719[2]

IEA: Inferred from Electronic Annotation

INTERPRO:IPR017970

F

From WB

GO:0045449

regulation of transcription

PMID:12520011[1]
PMID:12654719[2]

IEA: Inferred from Electronic Annotation

INTERPRO:IPR012287

P

From WB

GO:0045449

regulation of transcription

WB:WBPaper00002876
PMID:9292724[3]

ISS: Inferred from Sequence or Structural Similarity

UniProtKB:P50458

P

From WB

GO:0045664

regulation of neuron differentiation

WB:WBPaper00002876
PMID:9292724[3]

IMP: Inferred from Mutant Phenotype

WB:WBVar00088276

P

From WB


Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 1.8 1.9 Mulder NJ et al. (2003) The InterPro Database, 2003 brings increased coverage and new features. Nucleic Acids Res 31: 315-8 PubMed GONUTS page
  2. 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.8 2.9 Camon E et al. (2003) The Gene Ontology Annotation (GOA) project: implementation of GO in SWISS-PROT, TrEMBL, and InterPro. Genome Res 13: 662-72 PubMed GONUTS page
  3. 3.0 3.1 3.2 3.3 3.4 3.5 3.6 3.7 Hobert O et al. (1997) Regulation of interneuron function in the C. elegans thermoregulatory pathway by the ttx-3 LIM homeobox gene. Neuron 19: 345-57 PubMed GONUTS page
  4. Ishihara T et al. (2002) HEN-1, a secretory protein with an LDL receptor motif, regulates sensory integration and learning in Caenorhabditis elegans. Cell 109: 639-49 PubMed GONUTS page
  5. Remy JJ & Hobert O (2005) An interneuronal chemoreceptor required for olfactory imprinting in C. elegans. Science 309: 787-90 PubMed GONUTS page
  6. Prahlad V et al. (2008) Regulation of the cellular heat shock response in Caenorhabditis elegans by thermosensory neurons. Science 320: 811-4 PubMed GONUTS page
  7. Hirotsu T & Iino Y (2005) Neural circuit-dependent odor adaptation in C. elegans is regulated by the Ras-MAPK pathway. Genes Cells 10: 517-30 PubMed GONUTS page
  8. Byrne AB et al. (2007) A global analysis of genetic interactions in Caenorhabditis elegans. J Biol 6: 8 PubMed GONUTS page
  9. 9.0 9.1 9.2 9.3 Kuhara A et al. (2002) Negative regulation and gain control of sensory neurons by the C. elegans calcineurin TAX-6. Neuron 33: 751-63 PubMed GONUTS page
  10. Satterlee JS et al. (2004) The CMK-1 CaMKI and the TAX-4 Cyclic nucleotide-gated channel regulate thermosensory neuron gene expression and function in C. elegans. Curr Biol 14: 62-8 PubMed GONUTS page


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