WB:C38D4.6c

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Annotations

Qualifier	GO ID	GO term name	Reference(s)	Evidence Code	with/from	Aspect	Notes
	GO:0000794	condensed nuclear chromosome	WB:WBPaper00002573 PMID:8861906^[1]	IDA: Inferred from Direct Assay		C	From WB
	GO:0001712	ectodermal cell fate commitment	WB:WBPaper00002573 PMID:8861906^[1]	IMP: Inferred from Mutant Phenotype	WB:WBVar00054602	P	From WB
	GO:0003677	DNA binding	PMID:12520011^[2] PMID:12654719^[3]	IEA: Inferred from Electronic Annotation	INTERPRO:IPR012287	F	From WB
	GO:0003700	sequence-specific DNA binding transcription factor activity	PMID:12520011^[2] PMID:12654719^[3]	IEA: Inferred from Electronic Annotation	INTERPRO:IPR001356	F	From WB
	GO:0003702	RNA polymerase II transcription factor activity	WB:WBPaper00002573 PMID:8861906^[1]	IMP: Inferred from Mutant Phenotype	WB:WBVar00054602	F	From WB
	GO:0003705	RNA polymerase II transcription factor activity, enhancer binding	WB:WBPaper00032967 PMID:19261701^[4]	IDA: Inferred from Direct Assay		F	From WB
	GO:0005634	nucleus	PMID:12520011^[2] PMID:12654719^[3]	IEA: Inferred from Electronic Annotation	INTERPRO:IPR017970	C	From WB
	GO:0005634	nucleus	WB:WBPaper00002573 PMID:8861906^[1]	IDA: Inferred from Direct Assay		C	From WB
	GO:0006355	regulation of transcription, DNA-dependent	PMID:12520011^[2] PMID:12654719^[3]	IEA: Inferred from Electronic Annotation	INTERPRO:IPR001356	P	From WB
	GO:0006355	regulation of transcription, DNA-dependent	PMID:12520011^[2] PMID:12654719^[3]	IEA: Inferred from Electronic Annotation	INTERPRO:IPR017970	P	From WB
	GO:0009790	embryo development	WB:WBPaper00002573 PMID:8861906^[1]	IMP: Inferred from Mutant Phenotype	WB:WBVar00054602	P	From WB
	GO:0009792	embryo development ending in birth or egg hatching	WB:WBPaper00004403 PMID:11099034^[5]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00002523 WB:WBPhenotype:0000050	P	From WB
	GO:0009792	embryo development ending in birth or egg hatching	WB:WBPaper00004509 PMID:11178279^[6]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00077273 WB:WBPhenotype:0000050	P	From WB
	GO:0009792	embryo development ending in birth or egg hatching	WB:WBPaper00004509 PMID:11178279^[6]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00077287 WB:WBPhenotype:0000050	P	From WB
	GO:0009792	embryo development ending in birth or egg hatching	WB:WBPaper00005654 PMID:12529635^[7]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00008503 WB:WBPhenotype:0000050	P	From WB
	GO:0009792	embryo development ending in birth or egg hatching	WB:WBPaper00006395 PMID:14551910^[8]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00024779 WB:WBPhenotype:0000050	P	From WB
	GO:0009792	embryo development ending in birth or egg hatching	WB:WBPaper00025054 PMID:15791247^[9]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00042160 WB:WBPhenotype:0000050	P	From WB
	GO:0009792	embryo development ending in birth or egg hatching	WB:WBPaper00025054 PMID:15791247^[9]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00042161 WB:WBPhenotype:0000050	P	From WB
	GO:0009792	embryo development ending in birth or egg hatching	WB:WBPaper00025190 PMID:15892873^[10]	IMP: Inferred from Mutant Phenotype	WB:WBVar00054602 WB:WBPhenotype:0000050	P	From WB
	GO:0009880	embryonic pattern specification	WB:WBPaper00002573 PMID:8861906^[1]	IMP: Inferred from Mutant Phenotype	WB:WBVar00054602	P	From WB
	GO:0010467	gene expression	WB:WBPaper00032967 PMID:19261701^[4]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00078101 WB:WBPhenotype:0000717	P	From WB
	GO:0030528	transcription regulator activity	PMID:12520011^[2] PMID:12654719^[3]	IEA: Inferred from Electronic Annotation	INTERPRO:IPR017970	F	From WB
	GO:0040010	positive regulation of growth rate	WB:WBPaper00031036 PMID:17897480^[11]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00066939 WB:WBPhenotype:0000031	P	From WB
	GO:0040010	positive regulation of growth rate	WB:WBPaper00031036 PMID:17897480^[11]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00066966 WB:WBPhenotype:0000031	P	From WB
	GO:0040010	positive regulation of growth rate	WB:WBPaper00031036 PMID:17897480^[11]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00067021 WB:WBPhenotype:0000031	P	From WB
	GO:0040010	positive regulation of growth rate	WB:WBPaper00031036 PMID:17897480^[11]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00067156 WB:WBPhenotype:0000031	P	From WB
	GO:0040010	positive regulation of growth rate	WB:WBPaper00031036 PMID:17897480^[11]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00067181 WB:WBPhenotype:0000031	P	From WB
	GO:0040010	positive regulation of growth rate	WB:WBPaper00031036 PMID:17897480^[11]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00067251 WB:WBPhenotype:0000031	P	From WB
	GO:0040010	positive regulation of growth rate	WB:WBPaper00031036 PMID:17897480^[11]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00067313 WB:WBPhenotype:0000031	P	From WB
	GO:0040010	positive regulation of growth rate	WB:WBPaper00031036 PMID:17897480^[11]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00067337 WB:WBPhenotype:0000031	P	From WB
	GO:0040010	positive regulation of growth rate	WB:WBPaper00031036 PMID:17897480^[11]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00067405 WB:WBPhenotype:0000031	P	From WB
	GO:0040010	positive regulation of growth rate	WB:WBPaper00031036 PMID:17897480^[11]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00067435 WB:WBPhenotype:0000031	P	From WB
	GO:0040010	positive regulation of growth rate	WB:WBPaper00031036 PMID:17897480^[11]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00067440 WB:WBPhenotype:0000031	P	From WB
	GO:0040010	positive regulation of growth rate	WB:WBPaper00031036 PMID:17897480^[11]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00067658 WB:WBPhenotype:0000031	P	From WB
	GO:0040010	positive regulation of growth rate	WB:WBPaper00031036 PMID:17897480^[11]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00067738 WB:WBPhenotype:0000031	P	From WB
	GO:0040010	positive regulation of growth rate	WB:WBPaper00031036 PMID:17897480^[11]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00067812 WB:WBPhenotype:0000031	P	From WB
	GO:0040010	positive regulation of growth rate	WB:WBPaper00031036 PMID:17897480^[11]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00068118 WB:WBPhenotype:0000031	P	From WB
	GO:0040010	positive regulation of growth rate	WB:WBPaper00031036 PMID:17897480^[11]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00068137 WB:WBPhenotype:0000031	P	From WB
	GO:0042693	muscle cell fate commitment	WB:WBPaper00002573 PMID:8861906^[1]	IMP: Inferred from Mutant Phenotype	WB:WBVar00054602	P	From WB
	GO:0043565	sequence-specific DNA binding	PMID:12520011^[2] PMID:12654719^[3]	IEA: Inferred from Electronic Annotation	INTERPRO:IPR001356	F	From WB
	GO:0043565	sequence-specific DNA binding	PMID:12520011^[2] PMID:12654719^[3]	IEA: Inferred from Electronic Annotation	INTERPRO:IPR017970	F	From WB
	GO:0045449	regulation of transcription	PMID:12520011^[2] PMID:12654719^[3]	IEA: Inferred from Electronic Annotation	INTERPRO:IPR012287	P	From WB
	GO:0045944	positive regulation of transcription from RNA polymerase II promoter	WB:WBPaper00002573 PMID:8861906^[1]	IMP: Inferred from Mutant Phenotype	WB:WBVar00054602	P	From WB
	GO:0045944	positive regulation of transcription from RNA polymerase II promoter	WB:WBPaper00032967 PMID:19261701^[4]	IDA: Inferred from Direct Assay		P	From WB
	GO:0045944	positive regulation of transcription from RNA polymerase II promoter	WB:WBPaper00032967 PMID:19261701^[4]	IMP: Inferred from Mutant Phenotype		P	From WB
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Notes

References

See Help:References for how to manage references in GONUTS.

↑ ^1.0 ^1.1 ^1.2 ^1.3 ^1.4 ^1.5 ^1.6 ^1.7 Hunter CP & Kenyon C (1996) Spatial and temporal controls target pal-1 blastomere-specification activity to a single blastomere lineage in C. elegans embryos. Cell 87: 217-26 PubMed GONUTS page
↑ ^2.0 ^2.1 ^2.2 ^2.3 ^2.4 ^2.5 ^2.6 ^2.7 ^2.8 Mulder NJ et al. (2003) The InterPro Database, 2003 brings increased coverage and new features. Nucleic Acids Res 31: 315-8 PubMed GONUTS page
↑ ^3.0 ^3.1 ^3.2 ^3.3 ^3.4 ^3.5 ^3.6 ^3.7 ^3.8 Camon E et al. (2003) The Gene Ontology Annotation (GOA) project: implementation of GO in SWISS-PROT, TrEMBL, and InterPro. Genome Res 13: 662-72 PubMed GONUTS page
↑ ^4.0 ^4.1 ^4.2 ^4.3 Lei H et al. (2009) Caudal-like PAL-1 directly activates the bodywall muscle module regulator hlh-1 in C. elegans to initiate the embryonic muscle gene regulatory network. Development 136: 1241-9 PubMed GONUTS page
↑ Gönczy P et al. (2000) Functional genomic analysis of cell division in C. elegans using RNAi of genes on chromosome III. Nature 408: 331-6 PubMed GONUTS page
↑ ^6.0 ^6.1 Kamath RS et al. (2001) Effectiveness of specific RNA-mediated interference through ingested double-stranded RNA in Caenorhabditis elegans. Genome Biol 2: RESEARCH0002 PubMed GONUTS page
↑ Kamath RS et al. (2003) Systematic functional analysis of the Caenorhabditis elegans genome using RNAi. Nature 421: 231-7 PubMed GONUTS page
↑ Simmer F et al. (2003) Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals novel gene functions. PLoS Biol 1: E12 PubMed GONUTS page
↑ ^9.0 ^9.1 Sönnichsen B et al. (2005) Full-genome RNAi profiling of early embryogenesis in Caenorhabditis elegans. Nature 434: 462-9 PubMed GONUTS page
↑ Baugh LR et al. (2005) Synthetic lethal analysis of Caenorhabditis elegans posterior embryonic patterning genes identifies conserved genetic interactions. Genome Biol 6: R45 PubMed GONUTS page
↑ ^11.00 ^11.01 ^11.02 ^11.03 ^11.04 ^11.05 ^11.06 ^11.07 ^11.08 ^11.09 ^11.10 ^11.11 ^11.12 ^11.13 ^11.14 ^11.15 Byrne AB et al. (2007) A global analysis of genetic interactions in Caenorhabditis elegans. J Biol 6: 8 PubMed GONUTS page

{{{LINEAGE}}}

[PMID:8861906-0] 1.0 ^1.1 ^1.2 ^1.3 ^1.4 ^1.5 ^1.6 ^1.7 Hunter CP & Kenyon C (1996) Spatial and temporal controls target pal-1 blastomere-specification activity to a single blastomere lineage in C. elegans embryos. Cell 87: 217-26 PubMed GONUTS page

[PMID:12520011-1] 2.0 ^2.1 ^2.2 ^2.3 ^2.4 ^2.5 ^2.6 ^2.7 ^2.8 Mulder NJ et al. (2003) The InterPro Database, 2003 brings increased coverage and new features. Nucleic Acids Res 31: 315-8 PubMed GONUTS page

[PMID:12654719-2] 3.0 ^3.1 ^3.2 ^3.3 ^3.4 ^3.5 ^3.6 ^3.7 ^3.8 Camon E et al. (2003) The Gene Ontology Annotation (GOA) project: implementation of GO in SWISS-PROT, TrEMBL, and InterPro. Genome Res 13: 662-72 PubMed GONUTS page

[PMID:19261701-3] 4.0 ^4.1 ^4.2 ^4.3 Lei H et al. (2009) Caudal-like PAL-1 directly activates the bodywall muscle module regulator hlh-1 in C. elegans to initiate the embryonic muscle gene regulatory network. Development 136: 1241-9 PubMed GONUTS page

[PMID:11099034-4] Gönczy P et al. (2000) Functional genomic analysis of cell division in C. elegans using RNAi of genes on chromosome III. Nature 408: 331-6 PubMed GONUTS page

[PMID:11178279-5] 6.0 ^6.1 Kamath RS et al. (2001) Effectiveness of specific RNA-mediated interference through ingested double-stranded RNA in Caenorhabditis elegans. Genome Biol 2: RESEARCH0002 PubMed GONUTS page

[PMID:12529635-6] Kamath RS et al. (2003) Systematic functional analysis of the Caenorhabditis elegans genome using RNAi. Nature 421: 231-7 PubMed GONUTS page

[PMID:14551910-7] Simmer F et al. (2003) Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals novel gene functions. PLoS Biol 1: E12 PubMed GONUTS page

[PMID:15791247-8] 9.0 ^9.1 Sönnichsen B et al. (2005) Full-genome RNAi profiling of early embryogenesis in Caenorhabditis elegans. Nature 434: 462-9 PubMed GONUTS page

[PMID:15892873-9] Baugh LR et al. (2005) Synthetic lethal analysis of Caenorhabditis elegans posterior embryonic patterning genes identifies conserved genetic interactions. Genome Biol 6: R45 PubMed GONUTS page

[PMID:17897480-10] 11.00 ^11.01 ^11.02 ^11.03 ^11.04 ^11.05 ^11.06 ^11.07 ^11.08 ^11.09 ^11.10 ^11.11 ^11.12 ^11.13 ^11.14 ^11.15 Byrne AB et al. (2007) A global analysis of genetic interactions in Caenorhabditis elegans. J Biol 6: 8 PubMed GONUTS page

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Species (Taxon ID)	Caenorhabditis elegans (nematode) (taxon:6239)
Gene Name(s)	C38D4.6c ( synonyms: nob-2, C38D4.6 )
Protein Name(s)	No Information Provided.
External Links
WB	WBGene00003912

WB:C38D4.6c

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