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User:Mdao3

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CACAO II Spring 2012

No annotations for this user (yet.)
See the documentation at Special:CACAO for more information.



Fall 2011

  • Please specify a 'session' in the <cacao> tag.
  • Please specify a 'group' in the <cacao> tag.

See the documentation at Special:CACAO for more information.

StatusPageDate/TimeGO Term (Aspect)ReferenceEvidenceNotesLinks
DROME:LAR2011-09-21 10:09:pm CDTGO:0004725 - protein tyrosine phosphatase activity (F)PMID:21931847IDA

Figure 2a/b/h/j. Phosphatase activity and substrate recognition features of the different DLAR constructs.

challenge
DROME:LAR2011-09-25 03:47:pm CDTGO:0035335 - peptidyl-tyrosine dephosphorylation (P)PMID:21931847IPI

Figure 4. Evaluation of the phosphotyrosine binding pocket of the PTP domains of DLAR and PTP99A using para-

Nitrocatecholsulphate (PNC).

challenge
DROME:LAR2011-09-25 03:47:pm CDTGO:0005515 - protein binding (F)PMID:21931847IMP

Figure 5. Inter-domain interactions and inter-atomic networks for the PTP domains obtained from molecular dynamics simulations.

challenge
DROME:HP12011-10-04 08:16:pm CDTGO:0000792 (C)PMID:21966530IDA

Figure 1. Interaction of MU2 and HP1a.

challenge
DROME:HP12011-10-04 08:25:pm CDTGO:0005701 - polytene chromosome chromocenter (C)PMID:21966530IMP

Figure 3. Effects of HP1a depletion on focal movement.

challenge
DROME:HP12011-10-04 08:32:pm CDTGO:0010369 - chromocenter (C)PMID:21966530IDA

Figure 4. HP1a is not recruited to IRIF and laser induced breaks.

challenge
DROME:HP12011-10-04 08:38:pm CDTGO:0005657 - replication fork (C)PMID:21966530IDA

Figure 5. MU2 and cH2Av recognize stalled replication forks.

challenge
DROME:HP12011-10-04 08:44:pm CDTGO:0007067 - mitosis (P)PMID:21966530IDA

Fig 7. Treatment of S2 cells with HP1a dsRNA leads to a decrease in the number of cells in S phase and an apparent increase in the number of cells at both G1 and G2/M.

challenge
DROME:HP12011-10-04 08:47:pm CDTGO:0051332 - S phase of meiotic cell cycle (P)PMID:21966530IDA

Figure 7. HP1a depletion affects cell cycle in S2 cells.

challenge
DROME:HP12011-10-04 08:51:pm CDTGO:0042981 - regulation of apoptosis (P)PMID:21966530IDA

Figure 8. Apoptosis and G2/M checkpoint in wing discs.

challenge
HUMAN:FUS2011-10-06 10:58:pm CDTGO:0005634 - nucleus (C)PMID:21909421IDA

Figure 2. Subcellular localization of FUS in prostate cancer cells

challenge
HUMAN:FUS2011-10-09 04:37:pm CDTGO:0003713 - transcription coactivator activity (F)PMID:21909421IDA

Figure 1 establishes that FUS is complexed with AR. Figure 3 demonstrates that FUS possesses innate ability to regulate transcription. Figure 4 demonstrates that FUS modulates AR activity.

challenge
MOUSE:HAP12011-10-21 09:56:pm CDTGO:0048471 - perinuclear region of cytoplasm (C)PMID:21985783IDA

Figure 1

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MOUSE:HAP12011-10-21 10:11:pm CDTGO:0008267 - poly-glutamine tract binding (F)PMID:21985783IDA

Figure 2. PolyQ-length-dependent interaction between HAP1 and AR.

challenge
PSEAE:HYDA2011-10-21 10:24:pm CDTGO:0002146 - steroid hormone receptor import into nucleus (P)PMID:21985783IMP

fig. 5

challenge
MOUSE:HAP12011-10-21 10:30:pm CDTGO:2000766 - negative regulation of cytoplasmic translation (P)PMID:21985783IMP

fig. 4

challenge
MOUSE:HAP12011-10-21 10:35:pm CDTGO:0006917 - induction of apoptosis (P)PMID:21985783IDA

fig. 6

challenge
YEAST:GCN42011-10-23 12:59:am CDTGO:0052114 - adaptation to host pH environment (P)PMID:21919885IEP

fig. 3

challenge
YEAST:GCN42011-10-23 01:05:am CDTGO:0006865 - amino acid transport (P)PMID:21919885IDA

table 1

challenge
YEAST:GCN42011-10-23 01:05:am CDTGO:0022804 - active transmembrane transporter activity (F)PMID:21919885IMP

fig. 5

challenge
YEAST:GCN42011-10-23 01:07:am CDTGO:0032847 - regulation of cellular pH reduction (P)PMID:21919885IDA

fig. 6

challenge
YEAST:HAP42011-10-23 05:03:pm CDTGO:0043457 - regulation of cellular respiration (P)PMID:21108829IMP

fig. 1

challenge
YEAST:HAP42011-10-23 05:12:pm CDTGO:0043457 (P)PMID:21108829IDA

fig. 2

challenge
YEAST:HAP42011-10-23 05:16:pm CDTGO:0052369 - positive regulation by symbiont of defense-related host reactive oxygen species production (P)PMID:21108829IMP

fig. 3

challenge
YEAST:HAP42011-10-23 05:19:pm CDTGO:0042981 - regulation of apoptosis (P)PMID:21108829IMP

fig. 4

challenge
YEAST:HAP42011-10-23 05:26:pm CDTGO:0005981 - regulation of glycogen catabolic process (P)PMID:21108829IMP

fig. 5

challenge
YEAST:HAP42011-10-23 05:28:pm CDTGO:0043457 - regulation of cellular respiration (P)PMID:21108829IMP

fig. 6

challenge
YEAST:HAP42011-10-23 05:34:pm CDTGO:0005746 - mitochondrial respiratory chain (C)PMID:21108829IMP

fig. 7

challenge
DAPPU:E9HT812012-01-19 11:56:am CSTGO:0018316 - peptide cross-linking via L-cystine (P)PMID:21865594IMP

fig 2C: we found that the C27–C64 disulfide was formed in the presence of Mia40-WT. Of importance, in the absence of functional Mia40 no oxidation of the two cysteines occurred

challenge
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