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User:Dahle001

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StatusPageDate/TimeGO Term (Aspect)ReferenceEvidenceNotesLinks
MGI:Pfkm2012-02-07 07:03:pm CSTGO:0006096 - glycolysis (P)PMID:21573193IEP

Figure 7

challenge
MGI:Ucp22012-02-09 12:14:pm CSTGO:0032371 - regulation of sterol transport (P)PMID:21163946IMP

Figure 3

challenge
MOUSE:SIRT12012-02-09 12:29:pm CSTGO:0007587 - sugar utilization (1)PMID:21163946IEP

Figure 3

challenge
MGI:Foxo12012-02-09 12:27:pm CSTGO:0000122 - negative regulation of transcription from RNA polymerase II promoter (P)PMID:21163946IEP

figure 3

challenge
HUMAN:GTR22012-02-09 12:22:pm CSTGO:0010467 - gene expression (P)PMID:21163946IEP

Figure 4

challenge
HUMAN:TFAM2012-02-09 12:18:pm CSTGO:0010467 - gene expression (P)PMID:21163946IEP

figure 6

challenge
HUMAN:PRGC12012-02-08 05:28:pm CSTGO:0010467 - gene expression (P)PMID:21163946IGI

figure 4

challenge
RAT:AAPK12012-02-09 02:23:pm CSTGO:0004679 - AMP-activated protein kinase activity (F)PMID:2169968IDA

figure 4

challenge
RAT:MK012012-02-09 02:39:pm CSTGO:0010628 - positive regulation of gene expression (P)PMID:21699681IDA

figure 4

challenge
HUMAN:LPAR62012-02-23 12:07:pm CSTGO:0042636 - negative regulation of hair cycle (P)PMID:18692127IMP

Figure 2, part D

challenge
STAAU:MECR2012-02-23 12:25:pm CSTGO:0016481 - negative regulation of cellular transcription (1)PMID:22295022IDA

Figure 1, part A1

challenge
STAAU:BLAR2012-02-23 12:27:pm CSTGO:0016481 - negative regulation of cellular transcription (1)PMID:22295022IDA

Figure 1, part A2

challenge
HUMAN:ATF42012-03-12 03:37:pm CDTGO:0010467 - gene expression (P)PMID:22363646IDA

Figure 1A: Protein and mRNA levels of ATF4 were determined using Western Blot and qPCR. β-actin and GAPDH were used as a control.

challenge
HUMAN:ATF42012-03-12 03:58:pm CDTGO:0001558 - regulation of cell growth (P)PMID:22363646IMP

Figure 1B, C, D, E, H: When transfected into SGC7901 and AGS cells, colony number increased due to overexpression of ATF4. When ATF4 was knocked out of expression in SGC7901/ADR and SGC7901/VCR cells the colony number decreased. This shows that ATF4 produced multi-drug resistance in cancer cells, allowing for cell growth.

challenge
HUMAN:SIRT12012-03-12 04:15:pm CDTGO:0010628 - positive regulation of gene expression (P)PMID:22363646IGI

Figure 2: "The overexpression of ATF4 was associated with increased SIRT1 expression at both the transcriptional (Fig. 2A, left) and translational levels (Fig. 2B, left). In contrast, siRNA knockdown of ATF4 in SGC7901/ADR cells resulted in a significant reduction of endogenous SIRT1 expression (Fig. 2A and 2B, right). These results suggest that ATF4 up-regulates SIRT1 expression in gastric cancer cells."

challenge
HUMAN:SIRT12012-03-13 02:15:pm CDTGO:0006355 - regulation of transcription, DNA-dependent (P)PMID:22363646IGI

Figure 3A and C: "The luciferase reporter assay showed that the SIRT1 promoter activity was markedly activated by ATF4 in a dose-dependent manner... Cells showed enrichment of both binding sites within the SIRT1 promoter region, indicating that the RNA and subsequent protein level increases of SIRT1 in ATF4-expressing cell lines are likely due to a direct interaction of ATF4 with the SIRT1 gene promoter"

challenge
HUMAN:SIRT12012-03-13 02:28:pm CDTGO:0042493 - response to drug (P)PMID:22363646IMP

Figure 4: Knockdown of SIRT1 allows the cells to become sensitive to the drug. Data shows that SIRT1 allows the cell to be drug resistant.

challenge
HUMAN:SIRT12012-03-13 02:37:pm CDTGO:0043066 - negative regulation of apoptosis (P)PMID:22363646IEP

Figure 5A-C: overexpression of SIRT1 allows for the downregulation of apoptosis, allowing for ATF4-induced multi-drug resistance in gastric cancer.

challenge
HUMAN:ATF42012-03-13 03:04:pm CDTGO:0010467 - gene expression (P)PMID:22363646IGI

Figure 6: These results suggest that SIRT1 activity also plays a critical role in the ATF4-induced gastric cancer MDR and this role might be mediated partly through MDR1 expression.

challenge
HUMAN:PORED2012-03-14 02:28:pm CDTGO:0000184 - nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (P)PMID:20637498IDA

Figure 1: "The expression level of the gene is lower in almost all patients CVH-385-IV-13, CVH-385-IV-11, 07–0153 compared to control, suggesting nonsense mediated mRNA decay."

challenge
RAT:FAS2012-04-10 12:38:pm CDTGO:0004312 - fatty-acid synthase activity (F)PMID:21389266IDA

Figure 1

challenge
RAT:FAS2012-04-10 12:58:pm CDTGO:0006096 (P)PMID:21389266IDA

Figure 5

challenge
MOUSE:FAS2012-04-10 01:18:pm CDTGO:0008286 - insulin receptor signaling pathway (P)PMID:21098489IDA

"we also demonstrated that FAS is induced by insulin using freshly isolated human endothelial cells (Fig. 1B"

challenge
STAA8:NORB2012-04-10 01:38:pm CDTPMID:22407042IDA

Figure 2

challenge
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