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TAIR:WHY1

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Contents

Species (Taxon ID) Arabidopsis thaliana (thale cress) (taxon:3702)
Gene Name(s) WHY1 ( synonyms: AT1G14410, ATWHY1, PTAC1, A. THALIANA WHIRLY 1, AT1G14410.1, F14L17.18, F14L17_18, AtWHY1, WHY1, WHIRLY 1 )
Protein Name(s) WHIRLY 1, AT1G14410,
External Links
TAIR locus:2012542

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0003677

DNA binding

TAIR:AnalysisReference:501748310

IEA: Inferred from Electronic Annotation

INTERPRO:IPR009044

F

From TAIR

GO:0003677

DNA binding

TAIR:Publication:501717420
PMID:15967440[1]

ISS: Inferred from Sequence or Structural Similarity

GenBank:AF233342

F

From TAIR

GO:0006355

regulation of transcription, DNA-dependent

TAIR:AnalysisReference:501748310

IEA: Inferred from Electronic Annotation

INTERPRO:IPR009044

P

From TAIR

GO:0006952

defense response

TAIR:Publication:501720224
PMID:15708347[2]

TAS: Traceable Author Statement

P

From TAIR

GO:0009295

nucleoid

TAIR:Publication:501718303
PMID:16326926[3]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0009507

chloroplast

TAIR:Publication:501717420
PMID:15967440[1]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0009507

chloroplast

TAIR:Publication:501724486
PMID:18431481[4]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0009508

plastid chromosome

TAIR:Publication:501718303
PMID:16326926[3]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0032211

negative regulation of telomere maintenance via telomerase

TAIR:Publication:501720806
PMID:17217467[5]

IMP: Inferred from Mutant Phenotype

P

From TAIR

GO:0042162

telomeric DNA binding

TAIR:Publication:501720806
PMID:17217467[5]

IDA: Inferred from Direct Assay

F

From TAIR

NOT

GO:0005634

nucleus

TAIR:Publication:501717420
PMID:15967440[1]

IDA: Inferred from Direct Assay

C

From TAIR


Notes

References

See Help:References for how to manage references in GONUTS.
  1. 1.0 1.1 1.2 Krause K et al. (2005) DNA-binding proteins of the Whirly family in Arabidopsis thaliana are targeted to the organelles. FEBS Lett 579: 3707-12 PubMed GONUTS page
  2. Desveaux D et al. (2005) Whirly transcription factors: defense gene regulation and beyond. Trends Plant Sci 10: 95-102 PubMed GONUTS page
  3. 3.0 3.1 Pfalz J et al. (2006) pTAC2, -6, and -12 are components of the transcriptionally active plastid chromosome that are required for plastid gene expression. Plant Cell 18: 176-97 PubMed GONUTS page
  4. Zybailov B et al. (2008) Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. PLoS One 3: e1994 PubMed GONUTS page
  5. 5.0 5.1 Yoo HH et al. (2007) Single-stranded DNA binding factor AtWHY1 modulates telomere length homeostasis in Arabidopsis. Plant J 49: 442-51 PubMed GONUTS page
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