Ambox notice.png

GONUTS is under stress! The website is currently experiencing long-wait times and frequent time-outs due to the record number of students, groups, and annotations related to CACAO this semester. We are currently working on increasing performance -- please accept our apologies for the technical difficulties.

You can help reduce stress on the server by:

  1. not reloading pages frequently - this just adds
  2. opening links in new windows (so you can read the old page)

TAIR:TUF

From GONUTS
Jump to: navigation, search

Contents

Species (Taxon ID) Arabidopsis thaliana (thale cress) (taxon:3702)
Gene Name(s) TUF ( synonyms: AT4G11150, emb2448, TUFF, VHA-E1, embryo defective 2448, AT4G11150.1, T22B4.130, T22B4_130, VACUOLAR H+-ATPASE SUBUNIT E ISOFORM 1, TUF, vacuolar ATP synthase subunit E1 )
Protein Name(s) vacuolar ATP synthase subunit E1, AT4G11150,
External Links
TAIR locus:2136088

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0000325

plant-type vacuole

TAIR:Publication:501718909
PMID:16618929[1]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0005753

mitochondrial proton-transporting ATP synthase complex

TAIR:Communication:501714663

ISS: Inferred from Sequence or Structural Similarity

INTERPRO:IPR002842

C

From TAIR

GO:0005773

vacuole

TAIR:Publication:501711987
PMID:14760709[2]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0005773

vacuole

TAIR:Publication:501712581
PMID:15215502[3]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0005773

vacuole

TAIR:Publication:501714874
PMID:15539469[4]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0005774

vacuolar membrane

TAIR:Publication:501718909
PMID:16618929[1]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0005774

vacuolar membrane

TAIR:Publication:501720626
PMID:17151019[5]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0005794

Golgi apparatus

TAIR:Publication:501747810
PMID:22430844[6]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0006200

ATP catabolic process

TAIR:AnalysisReference:501748310

IEA: Inferred from Electronic Annotation

INTERPRO:IPR002842

P

From TAIR

GO:0007030

Golgi organization

TAIR:Publication:501714453
PMID:15610355[7]

IMP: Inferred from Mutant Phenotype

P

From TAIR

GO:0009409

response to cold

TAIR:Publication:501711313
PMID:14535880[8]

IEP: Inferred from Expression Pattern

P

From TAIR

GO:0009651

response to salt stress

TAIR:Publication:501723430
PMID:17916636[9]

IEP: Inferred from Expression Pattern

P

From TAIR

GO:0009705

plant-type vacuole membrane

TAIR:Publication:501714453
PMID:15610355[7]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0009793

embryo development ending in seed dormancy

TAIR:Communication:501718471

NAS: Non-traceable Author Statement

P

From TAIR

GO:0009793

embryo development ending in seed dormancy

TAIR:Publication:501714453
PMID:15610355[7]

IMP: Inferred from Mutant Phenotype

P

From TAIR

GO:0009832

plant-type cell wall biogenesis

TAIR:Publication:501714453
PMID:15610355[7]

IMP: Inferred from Mutant Phenotype

P

From TAIR

GO:0015986

ATP synthesis coupled proton transport

TAIR:Communication:501714663

ISS: Inferred from Sequence or Structural Similarity

INTERPRO:IPR002842

P

From TAIR

GO:0015991

ATP hydrolysis coupled proton transport

TAIR:AnalysisReference:501748310

IEA: Inferred from Electronic Annotation

INTERPRO:IPR002842

P

From TAIR

GO:0022626

cytosolic ribosome

TAIR:Publication:501714926
PMID:15734919[10]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0033178

proton-transporting two-sector ATPase complex, catalytic domain

TAIR:AnalysisReference:501748310

IEA: Inferred from Electronic Annotation

INTERPRO:IPR002842

C

From TAIR

GO:0042742

defense response to bacterium

TAIR:Publication:501720163
PMID:17028151[11]

IEP: Inferred from Expression Pattern

P

From TAIR

GO:0046961

proton-transporting ATPase activity, rotational mechanism

TAIR:AnalysisReference:501748310

IEA: Inferred from Electronic Annotation

INTERPRO:IPR002842

F

From TAIR

GO:0046961

proton-transporting ATPase activity, rotational mechanism

TAIR:Publication:501714453
PMID:15610355[7]

TAS: Traceable Author Statement

F

From TAIR

NOT

GO:0005829

cytosol

TAIR:Publication:501741191
PMID:21166475[12]

RCA: Inferred from Reviewed Computational Analysis

C

From TAIR


Notes

References

See Help:References for how to manage references in GONUTS.
  1. 1.0 1.1 Dunkley TP et al. (2006) Mapping the Arabidopsis organelle proteome. Proc Natl Acad Sci U S A 103: 6518-23 PubMed GONUTS page
  2. Szponarski W et al. (2004) Large-scale characterization of integral proteins from Arabidopsis vacuolar membrane by two-dimensional liquid chromatography. Proteomics 4: 397-406 PubMed GONUTS page
  3. Shimaoka T et al. (2004) Isolation of intact vacuoles and proteomic analysis of tonoplast from suspension-cultured cells of Arabidopsis thaliana. Plant Cell Physiol 45: 672-83 PubMed GONUTS page
  4. Carter C et al. (2004) The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. Plant Cell 16: 3285-303 PubMed GONUTS page
  5. Jaquinod M et al. (2007) A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. Mol Cell Proteomics 6: 394-412 PubMed GONUTS page
  6. Parsons HT et al. (2012) Isolation and proteomic characterization of the Arabidopsis Golgi defines functional and novel components involved in plant cell wall biosynthesis. Plant Physiol 159: 12-26 PubMed GONUTS page
  7. 7.0 7.1 7.2 7.3 7.4 Strompen G et al. (2005) Arabidopsis vacuolar H-ATPase subunit E isoform 1 is required for Golgi organization and vacuole function in embryogenesis. Plant J 41: 125-32 PubMed GONUTS page
  8. Kawamura Y & Uemura M (2003) Mass spectrometric approach for identifying putative plasma membrane proteins of Arabidopsis leaves associated with cold acclimation. Plant J 36: 141-54 PubMed GONUTS page
  9. Jiang Y et al. (2007) Comparative proteomic analysis of NaCl stress-responsive proteins in Arabidopsis roots. J Exp Bot 58: 3591-607 PubMed GONUTS page
  10. Chang IF et al. (2005) Proteomic characterization of evolutionarily conserved and variable proteins of Arabidopsis cytosolic ribosomes. Plant Physiol 137: 848-62 PubMed GONUTS page
  11. Jones AM et al. (2006) Modifications to the Arabidopsis defense proteome occur prior to significant transcriptional change in response to inoculation with Pseudomonas syringae. Plant Physiol 142: 1603-20 PubMed GONUTS page
  12. Ito J et al. (2011) Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. J Proteome Res 10: 1571-82 PubMed GONUTS page
Personal tools
Namespaces
Variants
Actions
Navigation
Cacao
Journal Clubs
page contributors
Toolbox