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TAIR:TOC1
Contents |
| Species (Taxon ID) | Arabidopsis thaliana (thale cress) (taxon:3702) | |
| Gene Name(s) | TOC1 ( synonyms: AT5G61380, APRR1, PRR1, AtTOC1, PSEUDO-RESPONSE REGULATOR 1, TIMING OF CAB EXPRESSION 1, AT5G61380.1, MFB13.13, MFB13_13, TOC1 ) | |
| Protein Name(s) | TIMING OF CAB EXPRESSION 1, AT5G61380, | |
| External Links | ||
| TAIR | locus:2163198 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0000156 |
two-component response regulator activity |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR001789 |
F |
From TAIR |
||
| GO:0000156 |
two-component response regulator activity |
TAIR:Communication:1675000 |
ISS: Inferred from Sequence or Structural Similarity |
F |
From TAIR |
|||
| GO:0000160 |
two-component signal transduction system (phosphorelay) |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR001789 |
P |
From TAIR |
||
| GO:0003677 |
DNA binding |
TAIR:Publication:501747551 |
IDA: Inferred from Direct Assay |
F |
From TAIR |
|||
| GO:0003700 |
sequence-specific DNA binding transcription factor activity |
TAIR:Publication:501747551 |
IDA: Inferred from Direct Assay |
F |
From TAIR |
|||
| GO:0005515 |
protein binding |
TAIR:Publication:501711690 |
IPI: Inferred from Physical Interaction |
F |
From TAIR |
|||
| GO:0005515 |
protein binding |
TAIR:Publication:501723828 |
IPI: Inferred from Physical Interaction |
F |
From TAIR |
|||
| GO:0005515 |
protein binding |
TAIR:Publication:501723828 |
IPI: Inferred from Physical Interaction |
F |
From TAIR |
|||
| GO:0005515 |
protein binding |
TAIR:Publication:501729451 |
IPI: Inferred from Physical Interaction |
F |
From TAIR |
|||
| GO:0005515 |
protein binding |
TAIR:Publication:501730049 |
IPI: Inferred from Physical Interaction |
F |
From TAIR |
|||
| GO:0005515 |
protein binding |
TAIR:Publication:501730295 |
IPI: Inferred from Physical Interaction |
F |
From TAIR |
|||
| GO:0005515 |
protein binding |
TAIR:Publication:501743366 |
IPI: Inferred from Physical Interaction |
F |
From TAIR |
|||
| GO:0005634 |
nucleus |
TAIR:Publication:182 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0005634 |
nucleus |
TAIR:Publication:501725116 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0005634 |
nucleus |
TAIR:Publication:501730049 |
TAS: Traceable Author Statement |
C |
From TAIR |
|||
| GO:0006351 |
transcription, DNA-dependent |
TAIR:Publication:501730049 |
TAS: Traceable Author Statement |
P |
From TAIR |
|||
| GO:0006355 |
regulation of transcription, DNA-dependent |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR001789 |
P |
From TAIR |
||
| GO:0006355 |
regulation of transcription, DNA-dependent |
TAIR:Publication:182 |
ISS: Inferred from Sequence or Structural Similarity |
P |
From TAIR |
|||
| GO:0006355 |
regulation of transcription, DNA-dependent |
TAIR:Publication:501681565 |
TAS: Traceable Author Statement |
P |
From TAIR |
|||
| GO:0007623 |
circadian rhythm |
TAIR:Publication:182 |
IEP: Inferred from Expression Pattern |
P |
From TAIR |
|||
| GO:0007623 |
circadian rhythm |
TAIR:Publication:501683132 |
TAS: Traceable Author Statement |
P |
From TAIR |
|||
| GO:0010031 |
circumnutation |
TAIR:Publication:501717377 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0010629 |
negative regulation of gene expression |
TAIR:Publication:501747551 |
IDA: Inferred from Direct Assay |
P |
From TAIR |
|||
| GO:0035556 |
intracellular signal transduction |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR001789 |
P |
From TAIR |
||
|
NOT |
GO:0044212 |
transcription regulatory region DNA binding |
TAIR:Publication:501730049 |
IDA: Inferred from Direct Assay |
F |
From TAIR |
| |
| edit table |
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Gendron JM et al. (2012) Arabidopsis circadian clock protein, TOC1, is a DNA-binding transcription factor. Proc Natl Acad Sci U S A 109: 3167-72 PubMed GONUTS page
- ↑ Más P et al. (2003) Targeted degradation of TOC1 by ZTL modulates circadian function in Arabidopsis thaliana. Nature 426: 567-70 PubMed GONUTS page
- ↑ 3.0 3.1 Para A et al. (2007) PRR3 Is a vascular regulator of TOC1 stability in the Arabidopsis circadian clock. Plant Cell 19: 3462-73 PubMed GONUTS page
- ↑ Matsushika A et al. (2002) The APRR1/TOC1 quintet implicated in circadian rhythms of Arabidopsis thaliana: II. Characterization with CCA1-overexpressing plants. Plant Cell Physiol 43: 118-22 PubMed GONUTS page
- ↑ 5.0 5.1 5.2 5.3 Pruneda-Paz JL et al. (2009) A functional genomics approach reveals CHE as a component of the Arabidopsis circadian clock. Science 323: 1481-5 PubMed GONUTS page
- ↑ Kim WY et al. (2007) ZEITLUPE is a circadian photoreceptor stabilized by GIGANTEA in blue light. Nature 449: 356-60 PubMed GONUTS page
- ↑ (2011) Evidence for network evolution in an Arabidopsis interactome map. Science 333: 601-7 PubMed GONUTS page
- ↑ 8.0 8.1 8.2 Strayer C et al. (2000) Cloning of the Arabidopsis clock gene TOC1, an autoregulatory response regulator homolog. Science 289: 768-71 PubMed GONUTS page
- ↑ Fujiwara S et al. (2008) Post-translational regulation of the Arabidopsis circadian clock through selective proteolysis and phosphorylation of pseudo-response regulator proteins. J Biol Chem 283: 23073-83 PubMed GONUTS page
- ↑ Hwang I et al. (2002) Two-component signal transduction pathways in Arabidopsis. Plant Physiol 129: 500-15 PubMed GONUTS page
- ↑ Matsushika A et al. (2000) Circadian waves of expression of the APRR1/TOC1 family of pseudo-response regulators in Arabidopsis thaliana: insight into the plant circadian clock. Plant Cell Physiol 41: 1002-12 PubMed GONUTS page
- ↑ Niinuma K et al. (2005) Circadian rhythm of circumnutation in inflorescence stems of Arabidopsis. Plant Cell Physiol 46: 1423-7 PubMed GONUTS page
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