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TAIR:SHR
Contents |
| Species (Taxon ID) | Arabidopsis thaliana (thale cress) (taxon:3702) | |
| Gene Name(s) | SHR ( synonyms: AT4G37650, SHR, SGR7, SHORT ROOT, SHOOT GRAVITROPISM 7, F19F18.140, F19F18_140 ) | |
| Protein Name(s) | AT4G37650, | |
| External Links | ||
| TAIR | locus:2120106 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0003700 |
sequence-specific DNA binding transcription factor activity |
TAIR:Communication:501714663 |
ISS: Inferred from Sequence or Structural Similarity |
Pfam:PF03514 |
F |
From TAIR |
||
| GO:0003700 |
sequence-specific DNA binding transcription factor activity |
TAIR:Publication:1345963 |
ISS: Inferred from Sequence or Structural Similarity |
F |
From TAIR |
|||
| GO:0003700 |
sequence-specific DNA binding transcription factor activity |
TAIR:Publication:342 |
ISS: Inferred from Sequence or Structural Similarity |
F |
From TAIR |
|||
| GO:0003700 |
sequence-specific DNA binding transcription factor activity |
TAIR:Publication:501718840 |
TAS: Traceable Author Statement |
F |
From TAIR |
|||
| GO:0005515 |
protein binding |
TAIR:Publication:501721367 |
IPI: Inferred from Physical Interaction |
AGI_LocusCode:AT3G54220 |
F |
From TAIR |
||
| GO:0005515 |
protein binding |
TAIR:Publication:501721367 |
IPI: Inferred from Physical Interaction |
F |
From TAIR |
|||
| GO:0005515 |
protein binding |
TAIR:Publication:501723231 |
IPI: Inferred from Physical Interaction |
AGI_LocusCode:At1g03840 |
F |
From TAIR |
||
| GO:0005515 |
protein binding |
TAIR:Publication:501723231 |
IPI: Inferred from Physical Interaction |
AGI_LocusCode:At5g03150 |
F |
From TAIR |
||
| GO:0005515 |
protein binding |
TAIR:Publication:501724703 |
IPI: Inferred from Physical Interaction |
F |
From TAIR |
|||
| GO:0005634 |
nucleus |
TAIR:Publication:501680554 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0005634 |
nucleus |
TAIR:Publication:501680554 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0007049 |
cell cycle |
TAIR:Publication:501739710 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0008356 |
asymmetric cell division |
TAIR:Publication:342 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0009956 |
radial pattern formation |
TAIR:Publication:342 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0032350 |
regulation of hormone metabolic process |
TAIR:Publication:501718840 |
NAS: Non-traceable Author Statement |
P |
From TAIR |
|||
| GO:0043565 |
sequence-specific DNA binding |
TAIR:Publication:501718840 |
IDA: Inferred from Direct Assay |
F |
From TAIR |
|||
| GO:0043565 |
sequence-specific DNA binding |
TAIR:Publication:501721367 |
IDA: Inferred from Direct Assay |
F |
From TAIR |
|||
| GO:0048366 |
leaf development |
TAIR:Publication:501739710 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0055072 |
iron ion homeostasis |
TAIR:Publication:501734891 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
| ||
| edit table |
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Riechmann JL et al. (2000) Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Science 290: 2105-10 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Helariutta Y et al. (2000) The SHORT-ROOT gene controls radial patterning of the Arabidopsis root through radial signaling. Cell 101: 555-67 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 Levesque MP et al. (2006) Whole-genome analysis of the SHORT-ROOT developmental pathway in Arabidopsis. PLoS Biol 4: e143 PubMed GONUTS page
- ↑ 4.0 4.1 4.2 Cui H et al. (2007) An evolutionarily conserved mechanism delimiting SHR movement defines a single layer of endodermis in plants. Science 316: 421-5 PubMed GONUTS page
- ↑ 5.0 5.1 Welch D et al. (2007) Arabidopsis JACKDAW and MAGPIE zinc finger proteins delimit asymmetric cell division and stabilize tissue boundaries by restricting SHORT-ROOT action. Genes Dev 21: 2196-204 PubMed GONUTS page
- ↑ Lee MH et al. (2008) Large-scale analysis of the GRAS gene family in Arabidopsis thaliana. Plant Mol Biol 67: 659-70 PubMed GONUTS page
- ↑ 7.0 7.1 Nakajima K et al. (2001) Intercellular movement of the putative transcription factor SHR in root patterning. Nature 413: 307-11 PubMed GONUTS page
- ↑ 8.0 8.1 Dhondt S et al. (2010) SHORT-ROOT and SCARECROW regulate leaf growth in Arabidopsis by stimulating S-phase progression of the cell cycle. Plant Physiol 154: 1183-95 PubMed GONUTS page
- ↑ Roschzttardtz H et al. (2009) Identification of the endodermal vacuole as the iron storage compartment in the Arabidopsis embryo. Plant Physiol 151: 1329-38 PubMed GONUTS page
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