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TAIR:SHD
Contents |
| Species (Taxon ID) | Arabidopsis thaliana (thale cress) (taxon:3702) | |
| Gene Name(s) | SHD ( synonyms: AT4G24190, AtHsp90.7, AtHsp90-7, HEAT SHOCK PROTEIN 90.7, HEAT SHOCK PROTEIN 90-7, AT4G24190.2, HSP90.7, AT4G24190.1, T22A6.20, T22A6_20, SHD, SHEPHERD ) | |
| Protein Name(s) | SHEPHERD, AT4G24190, | |
| External Links | ||
| TAIR | locus:2135887 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0005524 |
ATP binding |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR001404 |
F |
From TAIR |
||
| GO:0005524 |
ATP binding |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR001404 |
F |
From TAIR |
||
| GO:0005524 |
ATP binding |
TAIR:Communication:501714663 |
ISS: Inferred from Sequence or Structural Similarity |
Pfam:PF02518 |
F |
From TAIR |
||
| GO:0005634 |
nucleus |
TAIR:Publication:501711432 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0005739 |
mitochondrion |
TAIR:Publication:501711651 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0005773 |
vacuole |
TAIR:Publication:501714874 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0005773 |
vacuole |
TAIR:Publication:501714874 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0005774 |
vacuolar membrane |
TAIR:Publication:501720626 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0005774 |
vacuolar membrane |
TAIR:Publication:501720626 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0005783 |
endoplasmic reticulum |
TAIR:Publication:1547425 |
ISS: Inferred from Sequence or Structural Similarity |
C |
From TAIR |
|||
| GO:0005783 |
endoplasmic reticulum |
TAIR:Publication:501718909 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0005783 |
endoplasmic reticulum |
TAIR:Publication:501720063 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0005886 |
plasma membrane |
TAIR:Publication:501722708 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0005886 |
plasma membrane |
TAIR:Publication:501722708 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0006457 |
protein folding |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR001404 |
P |
From TAIR |
||
| GO:0006457 |
protein folding |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR001404 |
P |
From TAIR |
||
| GO:0006457 |
protein folding |
TAIR:Communication:501714663 |
ISS: Inferred from Sequence or Structural Similarity |
INTERPRO:IPR001404 |
P |
From TAIR |
||
| GO:0006950 |
response to stress |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR001404 |
P |
From TAIR |
||
| GO:0006950 |
response to stress |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR001404 |
P |
From TAIR |
||
| GO:0009306 |
protein secretion |
TAIR:Publication:501720063 |
IDA: Inferred from Direct Assay |
P |
From TAIR |
|||
| GO:0009409 |
response to cold |
TAIR:Publication:501711432 |
IEP: Inferred from Expression Pattern |
P |
From TAIR |
|||
| GO:0009414 |
response to water deprivation |
TAIR:Publication:501729549 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0009506 |
plasmodesma |
TAIR:Publication:501742898 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0009507 |
chloroplast |
TAIR:Publication:501712079 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0009507 |
chloroplast |
TAIR:Publication:501724486 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0009507 |
chloroplast |
TAIR:Publication:501724486 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0009651 |
response to salt stress |
TAIR:Publication:501729549 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0009934 |
regulation of meristem structural organization |
TAIR:Publication:1547425 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0010075 |
regulation of meristem growth |
TAIR:Publication:1547425 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0016020 |
membrane |
TAIR:Publication:501721401 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0016020 |
membrane |
TAIR:Publication:501721401 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0046686 |
response to cadmium ion |
TAIR:Publication:501718481 |
IEP: Inferred from Expression Pattern |
P |
From TAIR |
|||
| GO:0046686 |
response to cadmium ion |
TAIR:Publication:501718481 |
IEP: Inferred from Expression Pattern |
P |
From TAIR |
|||
| GO:0051082 |
unfolded protein binding |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR001404 |
F |
From TAIR |
||
| GO:0051082 |
unfolded protein binding |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR001404 |
F |
From TAIR |
||
|
NOT |
GO:0005794 |
Golgi apparatus |
TAIR:Publication:501747810 |
RCA: Inferred from Reviewed Computational Analysis |
C |
From TAIR |
||
|
NOT |
GO:0005794 |
Golgi apparatus |
TAIR:Publication:501747810 |
RCA: Inferred from Reviewed Computational Analysis |
C |
From TAIR |
||
|
NOT |
GO:0005829 |
cytosol |
TAIR:Publication:501741191 |
RCA: Inferred from Reviewed Computational Analysis |
C |
From TAIR |
||
|
NOT |
GO:0005829 |
cytosol |
TAIR:Publication:501741191 |
RCA: Inferred from Reviewed Computational Analysis |
C |
From TAIR |
| |
| edit table |
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Bae MS et al. (2003) Analysis of the Arabidopsis nuclear proteome and its response to cold stress. Plant J 36: 652-63 PubMed GONUTS page
- ↑ Heazlewood JL et al. (2004) Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. Plant Cell 16: 241-56 PubMed GONUTS page
- ↑ 3.0 3.1 Carter C et al. (2004) The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. Plant Cell 16: 3285-303 PubMed GONUTS page
- ↑ 4.0 4.1 Jaquinod M et al. (2007) A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. Mol Cell Proteomics 6: 394-412 PubMed GONUTS page
- ↑ 5.0 5.1 5.2 Ishiguro S et al. (2002) SHEPHERD is the Arabidopsis GRP94 responsible for the formation of functional CLAVATA proteins. EMBO J 21: 898-908 PubMed GONUTS page
- ↑ Dunkley TP et al. (2006) Mapping the Arabidopsis organelle proteome. Proc Natl Acad Sci U S A 103: 6518-23 PubMed GONUTS page
- ↑ 7.0 7.1 Klein EM et al. (2006) Plant endoplasmin supports the protein secretory pathway and has a role in proliferating tissues. Plant J 48: 657-73 PubMed GONUTS page
- ↑ 8.0 8.1 Marmagne A et al. (2007) A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. Mol Cell Proteomics 6: 1980-96 PubMed GONUTS page
- ↑ 9.0 9.1 Song H et al. (2009) Overexpression of AtHsp90.2, AtHsp90.5 and AtHsp90.7 in Arabidopsis thaliana enhances plant sensitivity to salt and drought stresses. Planta 229: 955-64 PubMed GONUTS page
- ↑ Fernandez-Calvino L et al. (2011) Arabidopsis plasmodesmal proteome. PLoS One 6: e18880 PubMed GONUTS page
- ↑ Kleffmann T et al. (2004) The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. Curr Biol 14: 354-62 PubMed GONUTS page
- ↑ 12.0 12.1 Zybailov B et al. (2008) Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. PLoS One 3: e1994 PubMed GONUTS page
- ↑ 13.0 13.1 Mitra SK et al. (2007) Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. J Proteome Res 6: 1933-50 PubMed GONUTS page
- ↑ 14.0 14.1 Sarry JE et al. (2006) The early responses of Arabidopsis thaliana cells to cadmium exposure explored by protein and metabolite profiling analyses. Proteomics 6: 2180-98 PubMed GONUTS page
- ↑ 15.0 15.1 Parsons HT et al. (2012) Isolation and proteomic characterization of the Arabidopsis Golgi defines functional and novel components involved in plant cell wall biosynthesis. Plant Physiol 159: 12-26 PubMed GONUTS page
- ↑ 16.0 16.1 Ito J et al. (2011) Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. J Proteome Res 10: 1571-82 PubMed GONUTS page
