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TAIR:ROC4
Contents |
| Species (Taxon ID) | Arabidopsis thaliana (thale cress) (taxon:3702) | |
| Gene Name(s) | ROC4 ( synonyms: AT3G62030, ROC4, CYP20-3, rotamase CYP 4, cyclophilin 20-3, T17J13.1, PEPTIDYLPROLYL ISOMERASE ROC4, AT3G62030.1, AT3G62030.2, AT3G62030.3 ) | |
| Protein Name(s) | AT3G62030, rotamase CYP 4, | |
| External Links | ||
| TAIR | locus:2079507 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0000413 |
protein peptidyl-prolyl isomerization |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR002130 |
P |
From TAIR |
||
| GO:0000413 |
protein peptidyl-prolyl isomerization |
TAIR:Publication:501731670 |
IDA: Inferred from Direct Assay |
P |
From TAIR |
|||
| GO:0003755 |
peptidyl-prolyl cis-trans isomerase activity |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR002130 |
F |
From TAIR |
||
| GO:0003755 |
peptidyl-prolyl cis-trans isomerase activity |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR002130 |
F |
From TAIR |
||
| GO:0003755 |
peptidyl-prolyl cis-trans isomerase activity |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR002130 |
F |
From TAIR |
||
| GO:0003755 |
peptidyl-prolyl cis-trans isomerase activity |
TAIR:Communication:501714663 |
ISS: Inferred from Sequence or Structural Similarity |
InterPro:IPR002130 |
F |
From TAIR |
||
| GO:0003755 |
peptidyl-prolyl cis-trans isomerase activity |
TAIR:Publication:4912 |
IDA: Inferred from Direct Assay |
F |
From TAIR |
|||
| GO:0003755 |
peptidyl-prolyl cis-trans isomerase activity |
TAIR:Publication:501731670 |
IDA: Inferred from Direct Assay |
F |
From TAIR |
|||
| GO:0005515 |
protein binding |
TAIR:Publication:501728984 |
IPI: Inferred from Physical Interaction |
F |
From TAIR |
|||
| GO:0006457 |
protein folding |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR002130 |
P |
From TAIR |
||
| GO:0006457 |
protein folding |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR002130 |
P |
From TAIR |
||
| GO:0006457 |
protein folding |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR002130 |
P |
From TAIR |
||
| GO:0006457 |
protein folding |
TAIR:Communication:501714663 |
ISS: Inferred from Sequence or Structural Similarity |
InterPro:IPR002130 |
P |
From TAIR |
||
| GO:0006979 |
response to oxidative stress |
TAIR:Publication:501728984 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0007165 |
signal transduction |
TAIR:Publication:2893 |
ISS: Inferred from Sequence or Structural Similarity |
P |
From TAIR |
|||
| GO:0009507 |
chloroplast |
TAIR:Publication:501712079 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0009507 |
chloroplast |
TAIR:Publication:501724486 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0009535 |
chloroplast thylakoid membrane |
TAIR:Publication:501713005 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0009535 |
chloroplast thylakoid membrane |
TAIR:Publication:501713005 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0009570 |
chloroplast stroma |
TAIR:Publication:4912 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0009570 |
chloroplast stroma |
TAIR:Publication:501727324 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0009570 |
chloroplast stroma |
TAIR:Publication:501728638 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0009570 |
chloroplast stroma |
TAIR:Publication:501735990 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0009579 |
thylakoid |
TAIR:Publication:501719172 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0009642 |
response to light intensity |
TAIR:Publication:501728984 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0009651 |
response to salt stress |
TAIR:Publication:501728984 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0009737 |
response to abscisic acid stimulus |
TAIR:Publication:501728826 |
IEP: Inferred from Expression Pattern |
P |
From TAIR |
|||
| GO:0009941 |
chloroplast envelope |
TAIR:Publication:501710686 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0009941 |
chloroplast envelope |
TAIR:Publication:501735990 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0010555 |
response to mannitol stimulus |
TAIR:Publication:501728984 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0019344 |
cysteine biosynthetic process |
TAIR:Publication:501728984 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0022626 |
cytosolic ribosome |
TAIR:Publication:501714975 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0031977 |
thylakoid lumen |
TAIR:Publication:1545989 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0042742 |
defense response to bacterium |
TAIR:Publication:501720163 |
IEP: Inferred from Expression Pattern |
P |
From TAIR |
|||
| GO:0048046 |
apoplast |
TAIR:Publication:501725189 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
|
NOT |
GO:0045036 |
protein targeting to chloroplast |
TAIR:Publication:4912 |
IDA: Inferred from Direct Assay |
P |
From TAIR |
| |
| edit table |
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Laxa M et al. (2007) Role of the cysteine residues in Arabidopsis thaliana cyclophilin CYP20-3 in peptidyl-prolyl cis-trans isomerase and redox-related functions. Biochem J 401: 287-97 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Lippuner V et al. (1994) Cloning and characterization of chloroplast and cytosolic forms of cyclophilin from Arabidopsis thaliana. J Biol Chem 269: 7863-8 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 3.3 3.4 3.5 Dominguez-Solis JR et al. (2008) A cyclophilin links redox and light signals to cysteine biosynthesis and stress responses in chloroplasts. Proc Natl Acad Sci U S A 105: 16386-91 PubMed GONUTS page
- ↑ Chou IT & Gasser CS (1997) Characterization of the cyclophilin gene family of Arabidopsis thaliana and phylogenetic analysis of known cyclophilin proteins. Plant Mol Biol 35: 873-92 PubMed GONUTS page
- ↑ Kleffmann T et al. (2004) The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. Curr Biol 14: 354-62 PubMed GONUTS page
- ↑ Zybailov B et al. (2008) Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. PLoS One 3: e1994 PubMed GONUTS page
- ↑ 7.0 7.1 Peltier JB et al. (2004) New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy. J Biol Chem 279: 49367-83 PubMed GONUTS page
- ↑ Rutschow H et al. (2008) Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis. Plant Physiol 148: 156-75 PubMed GONUTS page
- ↑ Peltier JB et al. (2006) The oligomeric stromal proteome of Arabidopsis thaliana chloroplasts. Mol Cell Proteomics 5: 114-33 PubMed GONUTS page
- ↑ 10.0 10.1 Ferro M et al. (2010) AT_CHLORO, a comprehensive chloroplast proteome database with subplastidial localization and curated information on envelope proteins. Mol Cell Proteomics 9: 1063-84 PubMed GONUTS page
- ↑ Giacomelli L et al. (2006) High light response of the thylakoid proteome in arabidopsis wild type and the ascorbate-deficient mutant vtc2-2. A comparative proteomics study. Plant Physiol 141: 685-701 PubMed GONUTS page
- ↑ Ghelis T et al. (2008) Protein tyrosine kinases and protein tyrosine phosphatases are involved in abscisic acid-dependent processes in Arabidopsis seeds and suspension cells. Plant Physiol 148: 1668-80 PubMed GONUTS page
- ↑ Froehlich JE et al. (2003) Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis. J Proteome Res 2: 413-25 PubMed GONUTS page
- ↑ Giavalisco P et al. (2005) High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. Plant Mol Biol 57: 577-91 PubMed GONUTS page
- ↑ Schubert M et al. (2002) Proteome map of the chloroplast lumen of Arabidopsis thaliana. J Biol Chem 277: 8354-65 PubMed GONUTS page
- ↑ Jones AM et al. (2006) Modifications to the Arabidopsis defense proteome occur prior to significant transcriptional change in response to inoculation with Pseudomonas syringae. Plant Physiol 142: 1603-20 PubMed GONUTS page
- ↑ Bindschedler LV et al. (2008) Hydroponic isotope labelling of entire plants (HILEP) for quantitative plant proteomics; an oxidative stress case study. Phytochemistry 69: 1962-72 PubMed GONUTS page
