GONUTS is under stress! The website is currently experiencing long-wait times and frequent time-outs due to the record number of students, groups, and annotations related to CACAO this semester. We are currently working on increasing performance -- please accept our apologies for the technical difficulties.
You can help reduce stress on the server by:
- not reloading pages frequently - this just adds
- opening links in new windows (so you can read the old page)
TAIR:RIF10
Contents |
| Species (Taxon ID) | Arabidopsis thaliana (thale cress) (taxon:3702) | |
| Gene Name(s) | RIF10 ( synonyms: AT3G03710, PNP, PDE326, POLYNUCLEOTIDE PHOSPHORYLASE, PIGMENT DEFECTIVE 326, AT3G03710.1, F20H23.26, RIF10, resistant to inhibition with FSM 10 ) | |
| Protein Name(s) | resistant to inhibition with FSM 10, AT3G03710, | |
| External Links | ||
| TAIR | locus:2079429 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0000175 |
3'-5'-exoribonuclease activity |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR015848 |
F |
From TAIR |
||
| GO:0000175 |
3'-5'-exoribonuclease activity |
TAIR:Communication:501714663 |
ISS: Inferred from Sequence or Structural Similarity |
INTERPRO:IPR001247 |
F |
From TAIR |
||
| GO:0003676 |
nucleic acid binding |
TAIR:Communication:501714663 |
ISS: Inferred from Sequence or Structural Similarity |
INTERPRO:IPR000958 |
F |
From TAIR |
||
| GO:0003723 |
RNA binding |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR003029 |
F |
From TAIR |
||
| GO:0003723 |
RNA binding |
TAIR:Communication:501714663 |
ISS: Inferred from Sequence or Structural Similarity |
INTERPRO:IPR003029 |
F |
From TAIR |
||
| GO:0004654 |
polyribonucleotide nucleotidyltransferase activity |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR012162 |
F |
From TAIR |
||
| GO:0006396 |
RNA processing |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR015847 |
P |
From TAIR |
||
| GO:0006402 |
mRNA catabolic process |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR012162 |
P |
From TAIR |
||
| GO:0009507 |
chloroplast |
TAIR:Publication:501712079 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0009507 |
chloroplast |
TAIR:Publication:501724486 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0009570 |
chloroplast stroma |
TAIR:Publication:501728638 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0009570 |
chloroplast stroma |
TAIR:Publication:501735990 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0010323 |
negative regulation of isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway |
TAIR:Publication:501718745 |
IMP: Inferred from Mutant Phenotype |
AGI_LocusCode:AT4G15560 |
P |
From TAIR |
||
| GO:0015995 |
chlorophyll biosynthetic process |
TAIR:Publication:501718745 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0016036 |
cellular response to phosphate starvation |
TAIR:Publication:501733744 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0016120 |
carotene biosynthetic process |
TAIR:Publication:501718745 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0016123 |
xanthophyll biosynthetic process |
TAIR:Publication:501718745 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0090305 |
nucleic acid phosphodiester bond hydrolysis |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR015848 |
P |
From TAIR |
| |
| edit table |
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Kleffmann T et al. (2004) The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. Curr Biol 14: 354-62 PubMed GONUTS page
- ↑ Zybailov B et al. (2008) Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. PLoS One 3: e1994 PubMed GONUTS page
- ↑ Peltier JB et al. (2006) The oligomeric stromal proteome of Arabidopsis thaliana chloroplasts. Mol Cell Proteomics 5: 114-33 PubMed GONUTS page
- ↑ Ferro M et al. (2010) AT_CHLORO, a comprehensive chloroplast proteome database with subplastidial localization and curated information on envelope proteins. Mol Cell Proteomics 9: 1063-84 PubMed GONUTS page
- ↑ 5.0 5.1 5.2 5.3 Sauret-Güeto S et al. (2006) Plastid cues posttranscriptionally regulate the accumulation of key enzymes of the methylerythritol phosphate pathway in Arabidopsis. Plant Physiol 141: 75-84 PubMed GONUTS page
- ↑ Marchive C et al. (2009) Abnormal physiological and molecular mutant phenotypes link chloroplast polynucleotide phosphorylase to the phosphorus deprivation response in Arabidopsis. Plant Physiol 151: 905-24 PubMed GONUTS page
3abc |
c cont.emn |
prstvx |
