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TAIR:RDR6
Contents |
| Species (Taxon ID) | Arabidopsis thaliana (thale cress) (taxon:3702) | |
| Gene Name(s) | RDR6 ( synonyms: AT3G49500, RDR6, SGS2, SDE1, RNA-dependent RNA polymerase 6, SUPPRESSOR OF GENE SILENCING 2, SILENCING DEFECTIVE 1, T9C5.95, AT3G49500.1 ) | |
| Protein Name(s) | AT3G49500, RNA-dependent RNA polymerase 6, | |
| External Links | ||
| TAIR | locus:2114633 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0003676 |
nucleic acid binding |
TAIR:Communication:501714663 |
ISS: Inferred from Sequence or Structural Similarity |
INTERPRO:IPR000504 |
F |
From TAIR |
||
| GO:0003968 |
RNA-directed RNA polymerase activity |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR007855 |
F |
From TAIR |
||
| GO:0003968 |
RNA-directed RNA polymerase activity |
TAIR:Publication:343 |
ISS: Inferred from Sequence or Structural Similarity |
F |
From TAIR |
|||
| GO:0005634 |
nucleus |
TAIR:Publication:501721209 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0008152 |
metabolic process |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR007855 |
P |
From TAIR |
||
| GO:0009616 |
virus induced gene silencing |
TAIR:Publication:501720410 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0010267 |
production of ta-siRNAs involved in RNA interference |
TAIR:Publication:501717620 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0010267 |
production of ta-siRNAs involved in RNA interference |
TAIR:Publication:501719121 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0016246 |
RNA interference |
TAIR:Publication:343 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0016441 |
posttranscriptional gene silencing |
TAIR:Publication:343 |
TAS: Traceable Author Statement |
P |
From TAIR |
|||
| GO:0030422 |
production of siRNA involved in RNA interference |
TAIR:Publication:501715201 |
TAS: Traceable Author Statement |
P |
From TAIR |
|||
| GO:0031047 |
gene silencing by RNA |
TAIR:Publication:501721209 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0048366 |
leaf development |
TAIR:Publication:501717298 |
IGI: Inferred from Genetic Interaction |
AGI_LocusCode:AT1G65620 |
P |
From TAIR |
||
| GO:0048440 |
carpel development |
TAIR:Publication:501721292 |
IGI: Inferred from Genetic Interaction |
Tair:gene:2177743 |
P |
From TAIR |
||
| GO:0048467 |
gynoecium development |
TAIR:Publication:501734774 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0048544 |
recognition of pollen |
TAIR:Publication:501734774 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0051607 |
defense response to virus |
TAIR:Publication:501719121 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
|
NOT |
GO:0035196 |
production of miRNAs involved in gene silencing by miRNA |
TAIR:Publication:501719119 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
| |
| edit table |
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Dalmay T et al. (2000) An RNA-dependent RNA polymerase gene in Arabidopsis is required for posttranscriptional gene silencing mediated by a transgene but not by a virus. Cell 101: 543-53 PubMed GONUTS page
- ↑ 2.0 2.1 Luo Z & Chen Z (2007) Improperly terminated, unpolyadenylated mRNA of sense transgenes is targeted by RDR6-mediated RNA silencing in Arabidopsis. Plant Cell 19: 943-58 PubMed GONUTS page
- ↑ Blevins T et al. (2006) Four plant Dicers mediate viral small RNA biogenesis and DNA virus induced silencing. Nucleic Acids Res 34: 6233-46 PubMed GONUTS page
- ↑ Yoshikawa M et al. (2005) A pathway for the biogenesis of trans-acting siRNAs in Arabidopsis. Genes Dev 19: 2164-75 PubMed GONUTS page
- ↑ 5.0 5.1 Adenot X et al. (2006) DRB4-dependent TAS3 trans-acting siRNAs control leaf morphology through AGO7. Curr Biol 16: 927-32 PubMed GONUTS page
- ↑ Allen E et al. (2005) microRNA-directed phasing during trans-acting siRNA biogenesis in plants. Cell 121: 207-21 PubMed GONUTS page
- ↑ Li H et al. (2005) The Putative RNA-dependent RNA polymerase RDR6 acts synergistically with ASYMMETRIC LEAVES1 and 2 to repress BREVIPEDICELLUS and MicroRNA165/166 in Arabidopsis leaf development. Plant Cell 17: 2157-71 PubMed GONUTS page
- ↑ Cui X et al. (2007) Roles of Arabidopsis cyclin-dependent kinase C complexes in cauliflower mosaic virus infection, plant growth, and development. Plant Cell 19: 1388-402 PubMed GONUTS page
- ↑ 9.0 9.1 Tantikanjana T et al. (2009) A dual role for the S-locus receptor kinase in self-incompatibility and pistil development revealed by an Arabidopsis rdr6 mutation. Plant Cell 21: 2642-54 PubMed GONUTS page
- ↑ Fahlgren N et al. (2006) Regulation of AUXIN RESPONSE FACTOR3 by TAS3 ta-siRNA affects developmental timing and patterning in Arabidopsis. Curr Biol 16: 939-44 PubMed GONUTS page
