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TAIR:PIL5
Contents |
| Species (Taxon ID) | Arabidopsis thaliana (thale cress) (taxon:3702) | |
| Gene Name(s) | PIL5 ( synonyms: AT2G20180, PIL5, PIF1, phytochrome interacting factor 3-like 5, PHY-INTERACTING FACTOR 1, T2G17.2, T2G17_2 ) | |
| Protein Name(s) | AT2G20180, | |
| External Links | ||
| TAIR | locus:2061634 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0003677 |
DNA binding |
TAIR:Publication:501721355 |
IDA: Inferred from Direct Assay |
F |
From TAIR |
|||
| GO:0003700 |
sequence-specific DNA binding transcription factor activity |
TAIR:Publication:1345963 |
ISS: Inferred from Sequence or Structural Similarity |
F |
From TAIR |
|||
| GO:0003700 |
sequence-specific DNA binding transcription factor activity |
TAIR:Publication:501705886 |
ISS: Inferred from Sequence or Structural Similarity |
F |
From TAIR |
|||
| GO:0003700 |
sequence-specific DNA binding transcription factor activity |
TAIR:Publication:501706884 |
ISS: Inferred from Sequence or Structural Similarity |
TAIR:PIF3 |
F |
From TAIR |
||
| GO:0003700 |
sequence-specific DNA binding transcription factor activity |
TAIR:Publication:501718226 |
TAS: Traceable Author Statement |
F |
From TAIR |
|||
| GO:0003700 |
sequence-specific DNA binding transcription factor activity |
TAIR:Publication:501742557 |
IDA: Inferred from Direct Assay |
F |
From TAIR |
|||
| GO:0005515 |
protein binding |
TAIR:Publication:501714257 |
IPI: Inferred from Physical Interaction |
F |
From TAIR |
|||
| GO:0005515 |
protein binding |
TAIR:Publication:501715381 |
IPI: Inferred from Physical Interaction |
F |
From TAIR |
|||
| GO:0005515 |
protein binding |
TAIR:Publication:501735900 |
IPI: Inferred from Physical Interaction |
F |
From TAIR |
|||
| GO:0005515 |
protein binding |
TAIR:Publication:501735900 |
IPI: Inferred from Physical Interaction |
F |
From TAIR |
|||
| GO:0005634 |
nucleus |
TAIR:Publication:501714257 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0005634 |
nucleus |
TAIR:Publication:501718226 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0006355 |
regulation of transcription, DNA-dependent |
TAIR:Publication:501721355 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0006355 |
regulation of transcription, DNA-dependent |
TAIR:Publication:501742557 |
IDA: Inferred from Direct Assay |
P |
From TAIR |
|||
| GO:0006783 |
heme biosynthetic process |
TAIR:Publication:501725056 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0009740 |
gibberellic acid mediated signaling pathway |
TAIR:Publication:501723840 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0009959 |
negative gravitropism |
TAIR:Publication:501718226 |
TAS: Traceable Author Statement |
P |
From TAIR |
|||
| GO:0009959 |
negative gravitropism |
TAIR:Publication:501719487 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0010029 |
regulation of seed germination |
TAIR:Publication:501718226 |
TAS: Traceable Author Statement |
P |
From TAIR |
|||
| GO:0010099 |
regulation of photomorphogenesis |
TAIR:Publication:501718226 |
TAS: Traceable Author Statement |
P |
From TAIR |
|||
| GO:0010100 |
negative regulation of photomorphogenesis |
TAIR:Publication:501725184 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0010161 |
red light signaling pathway |
TAIR:Publication:501725184 |
IDA: Inferred from Direct Assay |
P |
From TAIR |
|||
| GO:0010187 |
negative regulation of seed germination |
TAIR:Publication:501714257 |
IGI: Inferred from Genetic Interaction |
P |
From TAIR |
|||
| GO:0010187 |
negative regulation of seed germination |
TAIR:Publication:501718025 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0010313 |
phytochrome binding |
TAIR:Publication:501714257 |
IDA: Inferred from Direct Assay |
F |
From TAIR |
|||
| GO:0015995 |
chlorophyll biosynthetic process |
TAIR:Publication:501715381 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
| ||
| edit table |
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Oh E et al. (2007) PIL5, a phytochrome-interacting bHLH protein, regulates gibberellin responsiveness by binding directly to the GAI and RGA promoters in Arabidopsis seeds. Plant Cell 19: 1192-208 PubMed GONUTS page
- ↑ Riechmann JL et al. (2000) Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Science 290: 2105-10 PubMed GONUTS page
- ↑ Heim MA et al. (2003) The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity. Mol Biol Evol 20: 735-47 PubMed GONUTS page
- ↑ Yamashino T et al. (2003) A Link between circadian-controlled bHLH factors and the APRR1/TOC1 quintet in Arabidopsis thaliana. Plant Cell Physiol 44: 619-29 PubMed GONUTS page
- ↑ 5.0 5.1 5.2 5.3 5.4 Shen H et al. (2005) PIF1 is regulated by light-mediated degradation through the ubiquitin-26S proteasome pathway to optimize photomorphogenesis of seedlings in Arabidopsis. Plant J 44: 1023-35 PubMed GONUTS page
- ↑ 6.0 6.1 Park J et al. (2011) ABI3 and PIL5 collaboratively activate the expression of SOMNUS by directly binding to its promoter in imbibed Arabidopsis seeds. Plant Cell 23: 1404-15 PubMed GONUTS page
- ↑ 7.0 7.1 7.2 7.3 Oh E et al. (2004) PIL5, a phytochrome-interacting basic helix-loop-helix protein, is a key negative regulator of seed germination in Arabidopsis thaliana. Plant Cell 16: 3045-58 PubMed GONUTS page
- ↑ 8.0 8.1 Huq E et al. (2004) Phytochrome-interacting factor 1 is a critical bHLH regulator of chlorophyll biosynthesis. Science 305: 1937-41 PubMed GONUTS page
- ↑ 9.0 9.1 Gallego-Bartolomé J et al. (2010) Transcriptional diversification and functional conservation between DELLA proteins in Arabidopsis. Mol Biol Evol 27: 1247-56 PubMed GONUTS page
- ↑ Moon J et al. (2008) PIF1 directly and indirectly regulates chlorophyll biosynthesis to optimize the greening process in Arabidopsis. Proc Natl Acad Sci U S A 105: 9433-8 PubMed GONUTS page
- ↑ Alabadí D et al. (2008) Gibberellins modulate light signaling pathways to prevent Arabidopsis seedling de-etiolation in darkness. Plant J 53: 324-35 PubMed GONUTS page
- ↑ Oh E et al. (2006) Light activates the degradation of PIL5 protein to promote seed germination through gibberellin in Arabidopsis. Plant J 47: 124-39 PubMed GONUTS page
- ↑ 13.0 13.1 Shen H et al. (2008) Light-induced phosphorylation and degradation of the negative regulator PHYTOCHROME-INTERACTING FACTOR1 from Arabidopsis depend upon its direct physical interactions with photoactivated phytochromes. Plant Cell 20: 1586-602 PubMed GONUTS page
- ↑ Penfield S et al. (2005) Cold and light control seed germination through the bHLH transcription factor SPATULA. Curr Biol 15: 1998-2006 PubMed GONUTS page
