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TAIR:P40
Contents |
| Species (Taxon ID) | Arabidopsis thaliana (thale cress) (taxon:3702) | |
| Gene Name(s) | P40 ( synonyms: AT1G72370, P40, AP40, RP40, RPSAA, 40s ribosomal protein SA, T10D10.16, T10D10_16, AT1G72370.1, AT1G72370.2 ) | |
| Protein Name(s) | AT1G72370, 40s ribosomal protein SA, | |
| External Links | ||
| TAIR | locus:2193997 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0000028 |
ribosomal small subunit assembly |
TAIR:Communication:501741973 |
PANTHER:PTHR11489_AN0 |
P |
From TAIR |
|||
| GO:0000447 |
endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
TAIR:Communication:501741973 |
PANTHER:PTHR11489_AN0 |
P |
From TAIR |
|||
| GO:0000461 |
endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
TAIR:Communication:501741973 |
PANTHER:PTHR11489_AN0 |
P |
From TAIR |
|||
| GO:0003735 |
structural constituent of ribosome |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR001865 |
F |
From TAIR |
||
| GO:0003735 |
structural constituent of ribosome |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR001865 |
F |
From TAIR |
||
| GO:0003735 |
structural constituent of ribosome |
TAIR:Communication:501741973 |
PANTHER:PTHR11489_AN0 |
F |
From TAIR |
|||
| GO:0003735 |
structural constituent of ribosome |
TAIR:Publication:1545953 |
ISS: Inferred from Sequence or Structural Similarity |
SWISS-PROT:P38983 |
F |
From TAIR |
||
| GO:0005622 |
intracellular |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR001865 |
C |
From TAIR |
||
| GO:0005622 |
intracellular |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR001865 |
C |
From TAIR |
||
| GO:0005634 |
nucleus |
TAIR:Publication:501711432 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0005634 |
nucleus |
TAIR:Publication:501714452 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0005737 |
cytoplasm |
TAIR:Publication:4768 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0005737 |
cytoplasm |
TAIR:Publication:501714452 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0005829 |
cytosol |
TAIR:Publication:501741191 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0005829 |
cytosol |
TAIR:Publication:501741191 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0005840 |
ribosome |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR001865 |
C |
From TAIR |
||
| GO:0005840 |
ribosome |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR001865 |
C |
From TAIR |
||
| GO:0005886 |
plasma membrane |
TAIR:Publication:501720929 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0005886 |
plasma membrane |
TAIR:Publication:501720929 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0006407 |
rRNA export from nucleus |
TAIR:Communication:501741973 |
PANTHER:PTHR11489_AN0 |
P |
From TAIR |
|||
| GO:0006412 |
translation |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR001865 |
P |
From TAIR |
||
| GO:0006412 |
translation |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR001865 |
P |
From TAIR |
||
| GO:0006412 |
translation |
TAIR:Communication:501741973 |
PANTHER:PTHR11489_AN0 |
P |
From TAIR |
|||
| GO:0006412 |
translation |
TAIR:Publication:1545953 |
ISS: Inferred from Sequence or Structural Similarity |
SWISS-PROT:P38983 |
P |
From TAIR |
||
| GO:0006970 |
response to osmotic stress |
TAIR:Publication:501717826 |
IEP: Inferred from Expression Pattern |
P |
From TAIR |
|||
| GO:0009506 |
plasmodesma |
TAIR:Publication:501742898 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0009507 |
chloroplast |
TAIR:Publication:501712079 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0009507 |
chloroplast |
TAIR:Publication:501724486 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0009507 |
chloroplast |
TAIR:Publication:501724486 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0009651 |
response to salt stress |
TAIR:Publication:501717826 |
IEP: Inferred from Expression Pattern |
P |
From TAIR |
|||
| GO:0015935 |
small ribosomal subunit |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR005707 |
C |
From TAIR |
||
| GO:0015935 |
small ribosomal subunit |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR005707 |
C |
From TAIR |
||
| GO:0015935 |
small ribosomal subunit |
TAIR:Publication:4768 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0016020 |
membrane |
TAIR:Publication:501721401 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0016020 |
membrane |
TAIR:Publication:501721401 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0022626 |
cytosolic ribosome |
TAIR:Publication:501714926 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0022626 |
cytosolic ribosome |
TAIR:Publication:501714926 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0022626 |
cytosolic ribosome |
TAIR:Publication:501714975 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0022626 |
cytosolic ribosome |
TAIR:Publication:501714975 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0022626 |
cytosolic ribosome |
TAIR:Publication:501714975 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0022627 |
cytosolic small ribosomal subunit |
TAIR:Publication:1545953 |
ISS: Inferred from Sequence or Structural Similarity |
SWISS-PROT:P38983 |
C |
From TAIR |
||
| GO:0022627 |
cytosolic small ribosomal subunit |
TAIR:Publication:501723363 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0030686 |
90S preribosome |
TAIR:Communication:501741973 |
PANTHER:PTHR11489_AN0 |
C |
From TAIR |
|||
| GO:0042256 |
mature ribosome assembly |
TAIR:Publication:501675210 |
IDA: Inferred from Direct Assay |
P |
From TAIR |
|||
|
NOT |
GO:0005794 |
Golgi apparatus |
TAIR:Publication:501747810 |
RCA: Inferred from Reviewed Computational Analysis |
C |
From TAIR |
||
|
NOT |
GO:0005794 |
Golgi apparatus |
TAIR:Publication:501747810 |
RCA: Inferred from Reviewed Computational Analysis |
C |
From TAIR |
| |
| edit table |
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Barakat A et al. (2001) The organization of cytoplasmic ribosomal protein genes in the Arabidopsis genome. Plant Physiol 127: 398-415 PubMed GONUTS page
- ↑ Bae MS et al. (2003) Analysis of the Arabidopsis nuclear proteome and its response to cold stress. Plant J 36: 652-63 PubMed GONUTS page
- ↑ 3.0 3.1 Koroleva OA et al. (2005) High-throughput protein localization in Arabidopsis using Agrobacterium-mediated transient expression of GFP-ORF fusions. Plant J 41: 162-74 PubMed GONUTS page
- ↑ 4.0 4.1 García-Hernández M et al. (1994) Arabidopsis p40 homologue. A novel acidic protein associated with the 40 S subunit of ribosomes. J Biol Chem 269: 20744-9 PubMed GONUTS page
- ↑ 5.0 5.1 Ito J et al. (2011) Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. J Proteome Res 10: 1571-82 PubMed GONUTS page
- ↑ 6.0 6.1 Benschop JJ et al. (2007) Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. Mol Cell Proteomics 6: 1198-214 PubMed GONUTS page
- ↑ 7.0 7.1 Ndimba BK et al. (2005) Identification of Arabidopsis salt and osmotic stress responsive proteins using two-dimensional difference gel electrophoresis and mass spectrometry. Proteomics 5: 4185-96 PubMed GONUTS page
- ↑ Fernandez-Calvino L et al. (2011) Arabidopsis plasmodesmal proteome. PLoS One 6: e18880 PubMed GONUTS page
- ↑ Kleffmann T et al. (2004) The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. Curr Biol 14: 354-62 PubMed GONUTS page
- ↑ 10.0 10.1 Zybailov B et al. (2008) Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. PLoS One 3: e1994 PubMed GONUTS page
- ↑ 11.0 11.1 Mitra SK et al. (2007) Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. J Proteome Res 6: 1933-50 PubMed GONUTS page
- ↑ 12.0 12.1 Chang IF et al. (2005) Proteomic characterization of evolutionarily conserved and variable proteins of Arabidopsis cytosolic ribosomes. Plant Physiol 137: 848-62 PubMed GONUTS page
- ↑ 13.0 13.1 13.2 Giavalisco P et al. (2005) High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. Plant Mol Biol 57: 577-91 PubMed GONUTS page
- ↑ Carroll AJ et al. (2008) Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. Mol Cell Proteomics 7: 347-69 PubMed GONUTS page
- ↑ 15.0 15.1 Parsons HT et al. (2012) Isolation and proteomic characterization of the Arabidopsis Golgi defines functional and novel components involved in plant cell wall biosynthesis. Plant Physiol 159: 12-26 PubMed GONUTS page
