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TAIR:LCB2
Contents |
| Species (Taxon ID) | Arabidopsis thaliana (thale cress) (taxon:3702) | |
| Gene Name(s) | LCB2 ( synonyms: AT5G23670, AT5G23670.1, MQM1.6, MQM1_6, SERINE PALMITOYLTRANSFERASE, AT5G23670.2, LCB2, long chain base2 ) | |
| Protein Name(s) | long chain base2, AT5G23670, | |
| External Links | ||
| TAIR | locus:2171731 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0003824 |
catalytic activity |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR015421 |
F |
From TAIR |
||
| GO:0003824 |
catalytic activity |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR015421 |
F |
From TAIR |
||
| GO:0004758 |
serine C-palmitoyltransferase activity |
TAIR:Communication:501714663 |
ISS: Inferred from Sequence or Structural Similarity |
NCBI_gi:4995890 |
F |
From TAIR |
||
| GO:0004758 |
serine C-palmitoyltransferase activity |
TAIR:Publication:501706633 |
IDA: Inferred from Direct Assay |
F |
From TAIR |
|||
| GO:0005515 |
protein binding |
TAIR:Publication:501720500 |
IPI: Inferred from Physical Interaction |
Tair:gene:2115349 |
F |
From TAIR |
||
| GO:0005773 |
vacuole |
TAIR:Publication:501711987 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0005783 |
endoplasmic reticulum |
TAIR:Publication:501706633 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0008152 |
metabolic process |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR001917 |
P |
From TAIR |
||
| GO:0008152 |
metabolic process |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR001917 |
P |
From TAIR |
||
| GO:0009058 |
biosynthetic process |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR004839 |
P |
From TAIR |
||
| GO:0009058 |
biosynthetic process |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR004839 |
P |
From TAIR |
||
| GO:0009555 |
pollen development |
TAIR:Publication:501723913 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0009640 |
photomorphogenesis |
TAIR:Publication:501723913 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0016020 |
membrane |
TAIR:Publication:501706633 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0016740 |
transferase activity |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR001917 |
F |
From TAIR |
||
| GO:0016740 |
transferase activity |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR001917 |
F |
From TAIR |
||
| GO:0030148 |
sphingolipid biosynthetic process |
TAIR:Communication:501714663 |
ISS: Inferred from Sequence or Structural Similarity |
NCBI_gi:4995890 |
P |
From TAIR |
||
| GO:0030170 |
pyridoxal phosphate binding |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR004839 |
F |
From TAIR |
||
| GO:0030170 |
pyridoxal phosphate binding |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR004839 |
F |
From TAIR |
||
| GO:0046512 |
sphingosine biosynthetic process |
TAIR:Publication:501706633 |
IDA: Inferred from Direct Assay |
P |
From TAIR |
| ||
| edit table |
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 Tamura K et al. (2001) Characterization of an Arabidopsis cDNA encoding a subunit of serine palmitoyltransferase, the initial enzyme in sphingolipid biosynthesis. Plant Cell Physiol 42: 1274-81 PubMed GONUTS page
- ↑ Chen M et al. (2006) The essential nature of sphingolipids in plants as revealed by the functional identification and characterization of the Arabidopsis LCB1 subunit of serine palmitoyltransferase. Plant Cell 18: 3576-93 PubMed GONUTS page
- ↑ Szponarski W et al. (2004) Large-scale characterization of integral proteins from Arabidopsis vacuolar membrane by two-dimensional liquid chromatography. Proteomics 4: 397-406 PubMed GONUTS page
- ↑ 4.0 4.1 Dietrich CR et al. (2008) Loss-of-function mutations and inducible RNAi suppression of Arabidopsis LCB2 genes reveal the critical role of sphingolipids in gametophytic and sporophytic cell viability. Plant J 54: 284-98 PubMed GONUTS page
