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TAIR:LBA1
Contents |
| Species (Taxon ID) | Arabidopsis thaliana (thale cress) (taxon:3702) | |
| Gene Name(s) | LBA1 ( synonyms: AT5G47010, UPF1, ATUPF1, AT5G47010.1, MQD22.15, MQD22_15, AtUPF1, LBA1, LOW-LEVEL BETA-AMYLASE 1 ) | |
| Protein Name(s) | LOW-LEVEL BETA-AMYLASE 1, AT5G47010, | |
| External Links | ||
| TAIR | locus:2171007 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0000184 |
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR018999 |
P |
From TAIR |
||
| GO:0003677 |
DNA binding |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR006935 |
F |
From TAIR |
||
| GO:0003724 |
RNA helicase activity |
TAIR:Communication:501714663 |
ISS: Inferred from Sequence or Structural Similarity |
NCBI_gi:1885356 |
F |
From TAIR |
||
| GO:0004386 |
helicase activity |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR018999 |
F |
From TAIR |
||
| GO:0005524 |
ATP binding |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR006935 |
F |
From TAIR |
||
| GO:0005737 |
cytoplasm |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR018999 |
C |
From TAIR |
||
| GO:0005886 |
plasma membrane |
TAIR:Publication:501720929 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0008270 |
zinc ion binding |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR018999 |
F |
From TAIR |
||
| GO:0009506 |
plasmodesma |
TAIR:Publication:501742898 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0009744 |
response to sucrose stimulus |
TAIR:Publication:3313 |
IGI: Inferred from Genetic Interaction |
P |
From TAIR |
|||
| GO:0010182 |
sugar mediated signaling pathway |
TAIR:Publication:501719486 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0016246 |
RNA interference |
TAIR:Publication:501719290 |
IGI: Inferred from Genetic Interaction |
P |
From TAIR |
|||
| GO:0016787 |
hydrolase activity |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR006935 |
F |
From TAIR |
||
|
NOT |
GO:0005829 |
cytosol |
TAIR:Publication:501741191 |
RCA: Inferred from Reviewed Computational Analysis |
C |
From TAIR |
| |
| edit table |
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Benschop JJ et al. (2007) Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. Mol Cell Proteomics 6: 1198-214 PubMed GONUTS page
- ↑ Fernandez-Calvino L et al. (2011) Arabidopsis plasmodesmal proteome. PLoS One 6: e18880 PubMed GONUTS page
- ↑ Mita S et al. (1997) Mutants of Arabidopsis thaliana with pleiotropic effects on the expression of the gene for beta-amylase and on the accumulation of anthocyanin that are inducible by sugars. Plant J 11: 841-51 PubMed GONUTS page
- ↑ Yoine M et al. (2006) The lba1 mutation of UPF1 RNA helicase involved in nonsense-mediated mRNA decay causes pleiotropic phenotypic changes and altered sugar signalling in Arabidopsis. Plant J 47: 49-62 PubMed GONUTS page
- ↑ Arciga-Reyes L et al. (2006) UPF1 is required for nonsense-mediated mRNA decay (NMD) and RNAi in Arabidopsis. Plant J 47: 480-9 PubMed GONUTS page
- ↑ Ito J et al. (2011) Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. J Proteome Res 10: 1571-82 PubMed GONUTS page
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