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TAIR:CRB

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Contents

Species (Taxon ID) Arabidopsis thaliana (thale cress) (taxon:3702)
Gene Name(s) CRB ( synonyms: AT1G09340, CSP41B, HIP1.3, CHLOROPLAST STEM-LOOP BINDING PROTEIN OF 41 KDA, heteroglycan-interacting protein 1.3, AT1G09340.1, chloroplast RNA binding, CRB )
Protein Name(s) chloroplast RNA binding, AT1G09340,
External Links
TAIR locus:2203028

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0000166

nucleotide binding

TAIR:AnalysisReference:501748310

IEA: Inferred from Electronic Annotation

INTERPRO:IPR016040

F

From TAIR

GO:0003824

catalytic activity

TAIR:AnalysisReference:501748310

IEA: Inferred from Electronic Annotation

INTERPRO:IPR001509

F

From TAIR

GO:0005773

vacuole

TAIR:Publication:501714874
PMID:15539469[1]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0005777

peroxisome

TAIR:Publication:501723317
PMID:17951448[2]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0005777

peroxisome

TAIR:Publication:501723317
PMID:17951448[2]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0005840

ribosome

TAIR:Publication:501724571
PMID:18398686[3]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0006364

rRNA processing

TAIR:Publication:501724571
PMID:18398686[3]

IGI: Inferred from Genetic Interaction

AGI_LocusCode:AT3G63140

P

From TAIR

GO:0007623

circadian rhythm

TAIR:Publication:501722777
PMID:17617174[4]

IEP: Inferred from Expression Pattern

P

From TAIR

GO:0007623

circadian rhythm

TAIR:Publication:501722777
PMID:17617174[4]

IMP: Inferred from Mutant Phenotype

P

From TAIR

GO:0009409

response to cold

TAIR:Publication:501719694
PMID:16923014[5]

IEP: Inferred from Expression Pattern

P

From TAIR

GO:0009506

plasmodesma

TAIR:Publication:501742898
PMID:21533090[6]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0009507

chloroplast

TAIR:Publication:501712079
PMID:15028209[7]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0009507

chloroplast

TAIR:Publication:501724486
PMID:18431481[8]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0009507

chloroplast

TAIR:Publication:501735990
PMID:20061580[9]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0009570

chloroplast stroma

TAIR:Publication:501727324
PMID:18633119[10]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0009570

chloroplast stroma

TAIR:Publication:501728638
PMID:16207701[11]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0009658

chloroplast organization

TAIR:Publication:501722777
PMID:17617174[4]

IMP: Inferred from Mutant Phenotype

P

From TAIR

GO:0009941

chloroplast envelope

TAIR:Publication:501710686
PMID:12938931[12]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0010287

plastoglobule

TAIR:Publication:501718389
PMID:16414959[13]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0010287

plastoglobule

TAIR:Publication:501718581
PMID:16461379[14]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0010319

stromule

TAIR:Publication:501719694
PMID:16923014[5]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0016020

membrane

TAIR:Publication:501721401
PMID:17432890[15]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0042742

defense response to bacterium

TAIR:Publication:501720163
PMID:17028151[16]

IEP: Inferred from Expression Pattern

P

From TAIR

GO:0044237

cellular metabolic process

TAIR:AnalysisReference:501748310

IEA: Inferred from Electronic Annotation

INTERPRO:IPR001509

P

From TAIR

GO:0048046

apoplast

TAIR:Publication:501725189
PMID:18538804[17]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0050662

coenzyme binding

TAIR:AnalysisReference:501748310

IEA: Inferred from Electronic Annotation

INTERPRO:IPR001509

F

From TAIR


Notes

References

See Help:References for how to manage references in GONUTS.
  1. Carter C et al. (2004) The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. Plant Cell 16: 3285-303 PubMed GONUTS page
  2. 2.0 2.1 Reumann S et al. (2007) Proteome analysis of Arabidopsis leaf peroxisomes reveals novel targeting peptides, metabolic pathways, and defense mechanisms. Plant Cell 19: 3170-93 PubMed GONUTS page
  3. 3.0 3.1 Beligni MV & Mayfield SP (2008) Arabidopsis thaliana mutants reveal a role for CSP41a and CSP41b, two ribosome-associated endonucleases, in chloroplast ribosomal RNA metabolism. Plant Mol Biol 67: 389-401 PubMed GONUTS page
  4. 4.0 4.1 4.2 Hassidim M et al. (2007) Mutations in CHLOROPLAST RNA BINDING provide evidence for the involvement of the chloroplast in the regulation of the circadian clock in Arabidopsis. Plant J 51: 551-62 PubMed GONUTS page
  5. 5.0 5.1 Goulas E et al. (2006) The chloroplast lumen and stromal proteomes of Arabidopsis thaliana show differential sensitivity to short- and long-term exposure to low temperature. Plant J 47: 720-34 PubMed GONUTS page
  6. Fernandez-Calvino L et al. (2011) Arabidopsis plasmodesmal proteome. PLoS One 6: e18880 PubMed GONUTS page
  7. Kleffmann T et al. (2004) The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. Curr Biol 14: 354-62 PubMed GONUTS page
  8. Zybailov B et al. (2008) Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. PLoS One 3: e1994 PubMed GONUTS page
  9. Ferro M et al. (2010) AT_CHLORO, a comprehensive chloroplast proteome database with subplastidial localization and curated information on envelope proteins. Mol Cell Proteomics 9: 1063-84 PubMed GONUTS page
  10. Rutschow H et al. (2008) Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis. Plant Physiol 148: 156-75 PubMed GONUTS page
  11. Peltier JB et al. (2006) The oligomeric stromal proteome of Arabidopsis thaliana chloroplasts. Mol Cell Proteomics 5: 114-33 PubMed GONUTS page
  12. Froehlich JE et al. (2003) Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis. J Proteome Res 2: 413-25 PubMed GONUTS page
  13. Vidi PA et al. (2006) Tocopherol cyclase (VTE1) localization and vitamin E accumulation in chloroplast plastoglobule lipoprotein particles. J Biol Chem 281: 11225-34 PubMed GONUTS page
  14. Ytterberg AJ et al. (2006) Protein profiling of plastoglobules in chloroplasts and chromoplasts. A surprising site for differential accumulation of metabolic enzymes. Plant Physiol 140: 984-97 PubMed GONUTS page
  15. Mitra SK et al. (2007) Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. J Proteome Res 6: 1933-50 PubMed GONUTS page
  16. Jones AM et al. (2006) Modifications to the Arabidopsis defense proteome occur prior to significant transcriptional change in response to inoculation with Pseudomonas syringae. Plant Physiol 142: 1603-20 PubMed GONUTS page
  17. Bindschedler LV et al. (2008) Hydroponic isotope labelling of entire plants (HILEP) for quantitative plant proteomics; an oxidative stress case study. Phytochemistry 69: 1962-72 PubMed GONUTS page
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