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TAIR:CLPC1
Contents |
| Species (Taxon ID) | Arabidopsis thaliana (thale cress) (taxon:3702) | |
| Gene Name(s) | CLPC1 ( synonyms: AT5G50920, CLPC, ATHSP93-V, HSP93-V, DCA1, HEAT SHOCK PROTEIN 93-V, DE-REGULATED CAO ACCUMULATION 1, AT5G50920.1, K3K7.7, K3K7_7, CLPC1, CLPC homologue 1 ) | |
| Protein Name(s) | CLPC homologue 1, AT5G50920, | |
| External Links | ||
| TAIR | locus:2157383 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0000166 |
nucleotide binding |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR003593 |
F |
From TAIR |
||
| GO:0003677 |
DNA binding |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR001943 |
F |
From TAIR |
||
| GO:0004176 |
ATP-dependent peptidase activity |
TAIR:Publication:4248 |
IDA: Inferred from Direct Assay |
F |
From TAIR |
|||
| GO:0004518 |
nuclease activity |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR001943 |
F |
From TAIR |
||
| GO:0005524 |
ATP binding |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR001270 |
F |
From TAIR |
||
| GO:0005524 |
ATP binding |
TAIR:Communication:501714663 |
ISS: Inferred from Sequence or Structural Similarity |
INTERPRO:IPR001270 |
F |
From TAIR |
||
| GO:0005618 |
cell wall |
TAIR:Publication:501718077 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0005739 |
mitochondrion |
TAIR:Publication:501711651 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0006289 |
nucleotide-excision repair |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR001943 |
P |
From TAIR |
||
| GO:0009507 |
chloroplast |
TAIR:Publication:501712079 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0009507 |
chloroplast |
TAIR:Publication:501714627 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0009507 |
chloroplast |
TAIR:Publication:501724486 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0009532 |
plastid stroma |
TAIR:Publication:501711499 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0009535 |
chloroplast thylakoid membrane |
TAIR:Publication:501713005 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0009535 |
chloroplast thylakoid membrane |
TAIR:Publication:501713005 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0009570 |
chloroplast stroma |
TAIR:Publication:4248 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0009570 |
chloroplast stroma |
TAIR:Publication:501727324 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0009570 |
chloroplast stroma |
TAIR:Publication:501728638 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0009570 |
chloroplast stroma |
TAIR:Publication:501735990 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0009658 |
chloroplast organization |
TAIR:Publication:501714627 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0009706 |
chloroplast inner membrane |
TAIR:Publication:501747397 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0009941 |
chloroplast envelope |
TAIR:Publication:501707066 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0009941 |
chloroplast envelope |
TAIR:Publication:501710686 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0009941 |
chloroplast envelope |
TAIR:Publication:501735990 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0010380 |
regulation of chlorophyll biosynthetic process |
TAIR:Publication:501721001 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0016887 |
ATPase activity |
TAIR:Communication:501714663 |
ISS: Inferred from Sequence or Structural Similarity |
TIGR_TIGRFAMS:TIGR00382 |
F |
From TAIR |
||
| GO:0017111 |
nucleoside-triphosphatase activity |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR003593 |
F |
From TAIR |
||
| GO:0019538 |
protein metabolic process |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR004176 |
P |
From TAIR |
||
| GO:0031897 |
Tic complex |
TAIR:Publication:501714627 |
TAS: Traceable Author Statement |
C |
From TAIR |
|||
| GO:0045036 |
protein targeting to chloroplast |
TAIR:Publication:501737897 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0045037 |
protein import into chloroplast stroma |
TAIR:Publication:501714627 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0090305 |
nucleic acid phosphodiester bond hydrolysis |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR001943 |
P |
From TAIR |
||
|
NOT |
GO:0005829 |
cytosol |
TAIR:Publication:501741191 |
RCA: Inferred from Reviewed Computational Analysis |
C |
From TAIR |
| |
| edit table |
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Shanklin J et al. (1995) The stroma of higher plant plastids contain ClpP and ClpC, functional homologs of Escherichia coli ClpP and ClpA: an archetypal two-component ATP-dependent protease. Plant Cell 7: 1713-22 PubMed GONUTS page
- ↑ Bayer EM et al. (2006) Arabidopsis cell wall proteome defined using multidimensional protein identification technology. Proteomics 6: 301-11 PubMed GONUTS page
- ↑ Heazlewood JL et al. (2004) Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. Plant Cell 16: 241-56 PubMed GONUTS page
- ↑ Kleffmann T et al. (2004) The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. Curr Biol 14: 354-62 PubMed GONUTS page
- ↑ 5.0 5.1 5.2 5.3 Kovacheva S et al. (2005) In vivo studies on the roles of Tic110, Tic40 and Hsp93 during chloroplast protein import. Plant J 41: 412-28 PubMed GONUTS page
- ↑ Zybailov B et al. (2008) Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. PLoS One 3: e1994 PubMed GONUTS page
- ↑ Peltier JB et al. (2004) Clp protease complexes from photosynthetic and non-photosynthetic plastids and mitochondria of plants, their predicted three-dimensional structures, and functional implications. J Biol Chem 279: 4768-81 PubMed GONUTS page
- ↑ 8.0 8.1 Peltier JB et al. (2004) New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy. J Biol Chem 279: 49367-83 PubMed GONUTS page
- ↑ Rutschow H et al. (2008) Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis. Plant Physiol 148: 156-75 PubMed GONUTS page
- ↑ Peltier JB et al. (2006) The oligomeric stromal proteome of Arabidopsis thaliana chloroplasts. Mol Cell Proteomics 5: 114-33 PubMed GONUTS page
- ↑ 11.0 11.1 Ferro M et al. (2010) AT_CHLORO, a comprehensive chloroplast proteome database with subplastidial localization and curated information on envelope proteins. Mol Cell Proteomics 9: 1063-84 PubMed GONUTS page
- ↑ Chu CC & Li HM (2012) The amino-terminal domain of chloroplast Hsp93 is important for its membrane association and functions in vivo. Plant Physiol 158: 1656-65 PubMed GONUTS page
- ↑ Ferro M et al. (2003) Proteomics of the chloroplast envelope membranes from Arabidopsis thaliana. Mol Cell Proteomics 2: 325-45 PubMed GONUTS page
- ↑ Froehlich JE et al. (2003) Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis. J Proteome Res 2: 413-25 PubMed GONUTS page
- ↑ Nakagawara E et al. (2007) Clp protease controls chlorophyll b synthesis by regulating the level of chlorophyllide a oxygenase. Plant J 49: 800-9 PubMed GONUTS page
- ↑ Su PH & Li HM (2010) Stromal Hsp70 is important for protein translocation into pea and Arabidopsis chloroplasts. Plant Cell 22: 1516-31 PubMed GONUTS page
- ↑ Ito J et al. (2011) Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. J Proteome Res 10: 1571-82 PubMed GONUTS page
