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TAIR:ATPD

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Contents

Species (Taxon ID) Arabidopsis thaliana (thale cress) (taxon:3702)
Gene Name(s) ATPD ( synonyms: AT4G09650, ATPD, PDE332, ATP synthase delta-subunit gene, PIGMENT DEFECTIVE 332, T25P22.90, T25P22_90, AT4G09650.1 )
Protein Name(s) AT4G09650, ATP synthase delta-subunit gene,
External Links
TAIR locus:2136922

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0009409

response to cold

TAIR:Publication:501719694
PMID:16923014[1]

IEP: Inferred from Expression Pattern

P

From TAIR

GO:0009507

chloroplast

TAIR:Publication:501712079
PMID:15028209[2]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0009507

chloroplast

TAIR:Publication:501724486
PMID:18431481[3]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0009534

chloroplast thylakoid

TAIR:Publication:501735990
PMID:20061580[4]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0009535

chloroplast thylakoid membrane

TAIR:Publication:501711788
PMID:14729914[5]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0009535

chloroplast thylakoid membrane

TAIR:Publication:501713005
PMID:15322131[6]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0009535

chloroplast thylakoid membrane

TAIR:Publication:501713005
PMID:15322131[6]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0009579

thylakoid

TAIR:Publication:501681963
PMID:11826309[7]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0009579

thylakoid

TAIR:Publication:501711788
PMID:14729914[5]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0009772

photosynthetic electron transport in photosystem II

TAIR:Publication:501710574
PMID:12970486[8]

IMP: Inferred from Mutant Phenotype

P

From TAIR

GO:0009773

photosynthetic electron transport in photosystem I

TAIR:Publication:501710574
PMID:12970486[8]

IMP: Inferred from Mutant Phenotype

P

From TAIR

GO:0009941

chloroplast envelope

TAIR:Publication:501710686
PMID:12938931[9]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0009941

chloroplast envelope

TAIR:Publication:501735990
PMID:20061580[4]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0010287

plastoglobule

TAIR:Publication:501718389
PMID:16414959[10]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0010287

plastoglobule

TAIR:Publication:501718581
PMID:16461379[11]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0010319

stromule

TAIR:Publication:501719694
PMID:16923014[1]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0015979

photosynthesis

TAIR:Publication:501710574
PMID:12970486[8]

IMP: Inferred from Mutant Phenotype

P

From TAIR

GO:0015986

ATP synthesis coupled proton transport

TAIR:AnalysisReference:501748310

IEA: Inferred from Electronic Annotation

INTERPRO:IPR000711
INTERPRO:IPR020781

P

From TAIR

GO:0016020

membrane

TAIR:AnalysisReference:501748310

IEA: Inferred from Electronic Annotation

INTERPRO:IPR020781

C

From TAIR

GO:0016020

membrane

TAIR:Publication:501721401
PMID:17432890[12]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0042742

defense response to bacterium

TAIR:Publication:501720163
PMID:17028151[13]

IEP: Inferred from Expression Pattern

P

From TAIR

GO:0046933

hydrogen ion transporting ATP synthase activity, rotational mechanism

TAIR:AnalysisReference:501748310

IEA: Inferred from Electronic Annotation

INTERPRO:IPR000711
INTERPRO:IPR020781

F

From TAIR


Notes

References

See Help:References for how to manage references in GONUTS.
  1. 1.0 1.1 Goulas E et al. (2006) The chloroplast lumen and stromal proteomes of Arabidopsis thaliana show differential sensitivity to short- and long-term exposure to low temperature. Plant J 47: 720-34 PubMed GONUTS page
  2. Kleffmann T et al. (2004) The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. Curr Biol 14: 354-62 PubMed GONUTS page
  3. Zybailov B et al. (2008) Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. PLoS One 3: e1994 PubMed GONUTS page
  4. 4.0 4.1 Ferro M et al. (2010) AT_CHLORO, a comprehensive chloroplast proteome database with subplastidial localization and curated information on envelope proteins. Mol Cell Proteomics 9: 1063-84 PubMed GONUTS page
  5. 5.0 5.1 Friso G et al. (2004) In-depth analysis of the thylakoid membrane proteome of Arabidopsis thaliana chloroplasts: new proteins, new functions, and a plastid proteome database. Plant Cell 16: 478-99 PubMed GONUTS page
  6. 6.0 6.1 Peltier JB et al. (2004) New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy. J Biol Chem 279: 49367-83 PubMed GONUTS page
  7. Peltier JB et al. (2002) Central functions of the lumenal and peripheral thylakoid proteome of Arabidopsis determined by experimentation and genome-wide prediction. Plant Cell 14: 211-36 PubMed GONUTS page
  8. 8.0 8.1 8.2 Maiwald D et al. (2003) Knock-out of the genes coding for the Rieske protein and the ATP-synthase delta-subunit of Arabidopsis. Effects on photosynthesis, thylakoid protein composition, and nuclear chloroplast gene expression. Plant Physiol 133: 191-202 PubMed GONUTS page
  9. Froehlich JE et al. (2003) Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis. J Proteome Res 2: 413-25 PubMed GONUTS page
  10. Vidi PA et al. (2006) Tocopherol cyclase (VTE1) localization and vitamin E accumulation in chloroplast plastoglobule lipoprotein particles. J Biol Chem 281: 11225-34 PubMed GONUTS page
  11. Ytterberg AJ et al. (2006) Protein profiling of plastoglobules in chloroplasts and chromoplasts. A surprising site for differential accumulation of metabolic enzymes. Plant Physiol 140: 984-97 PubMed GONUTS page
  12. Mitra SK et al. (2007) Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. J Proteome Res 6: 1933-50 PubMed GONUTS page
  13. Jones AM et al. (2006) Modifications to the Arabidopsis defense proteome occur prior to significant transcriptional change in response to inoculation with Pseudomonas syringae. Plant Physiol 142: 1603-20 PubMed GONUTS page
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