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TAIR:ATL5
Contents |
| Species (Taxon ID) | Arabidopsis thaliana (thale cress) (taxon:3702) | |
| Gene Name(s) | ATL5 ( synonyms: AT3G25520, AT3G25520.2, PGY3, OLI5, RPL5A, PIGGYBACK3, OLIGOCELLULA 5, RIBOSOMAL PROTEIN L5 A, AT3G25520.1, MWL2.17, RIBOSOMAL PROTEIN L5, ATL5, ribosomal protein L5 ) | |
| Protein Name(s) | ribosomal protein L5, AT3G25520, | |
| External Links | ||
| TAIR | locus:2094508 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0003735 |
structural constituent of ribosome |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR005484 |
F |
From TAIR |
||
| GO:0003735 |
structural constituent of ribosome |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR005484 |
F |
From TAIR |
||
| GO:0003735 |
structural constituent of ribosome |
TAIR:Communication:501714663 |
ISS: Inferred from Sequence or Structural Similarity |
Pfam:PF00861 |
F |
From TAIR |
||
| GO:0005622 |
intracellular |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR005484 |
C |
From TAIR |
||
| GO:0005622 |
intracellular |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR005484 |
C |
From TAIR |
||
| GO:0005634 |
nucleus |
TAIR:Publication:501705801 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0005730 |
nucleolus |
TAIR:Publication:501705801 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0005737 |
cytoplasm |
TAIR:Publication:501705801 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0005773 |
vacuole |
TAIR:Publication:501712581 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0005829 |
cytosol |
TAIR:Publication:501741191 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0005840 |
ribosome |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR005484 |
C |
From TAIR |
||
| GO:0005840 |
ribosome |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR005484 |
C |
From TAIR |
||
| GO:0005840 |
ribosome |
TAIR:Communication:501714663 |
ISS: Inferred from Sequence or Structural Similarity |
Pfam:PF00861 |
C |
From TAIR |
||
| GO:0005886 |
plasma membrane |
TAIR:Publication:501720929 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0006412 |
translation |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR005484 |
P |
From TAIR |
||
| GO:0006412 |
translation |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR005484 |
P |
From TAIR |
||
| GO:0006412 |
translation |
TAIR:Communication:501714663 |
ISS: Inferred from Sequence or Structural Similarity |
Pfam:PF00861 |
P |
From TAIR |
||
| GO:0006913 |
nucleocytoplasmic transport |
TAIR:Publication:501705801 |
TAS: Traceable Author Statement |
P |
From TAIR |
|||
| GO:0008097 |
5S rRNA binding |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR005485 |
F |
From TAIR |
||
| GO:0008097 |
5S rRNA binding |
TAIR:AnalysisReference:501748310 |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR005485 |
F |
From TAIR |
||
| GO:0008097 |
5S rRNA binding |
TAIR:Publication:501705801 |
IDA: Inferred from Direct Assay |
F |
From TAIR |
|||
| GO:0008283 |
cell proliferation |
TAIR:Publication:501730161 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0009507 |
chloroplast |
TAIR:Publication:501712079 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0009507 |
chloroplast |
TAIR:Publication:501724486 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0009955 |
adaxial/abaxial pattern specification |
TAIR:Publication:501724040 |
IGI: Inferred from Genetic Interaction |
Tair:gene:2040670 |
P |
From TAIR |
||
| GO:0009965 |
leaf morphogenesis |
TAIR:Publication:501730161 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0010015 |
root morphogenesis |
TAIR:Publication:501730161 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0016020 |
membrane |
TAIR:Publication:501721401 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0022625 |
cytosolic large ribosomal subunit |
TAIR:Publication:501723363 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0022626 |
cytosolic ribosome |
TAIR:Publication:501714926 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0022626 |
cytosolic ribosome |
TAIR:Publication:501714975 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0022626 |
cytosolic ribosome |
TAIR:Publication:501714975 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0042254 |
ribosome biogenesis |
TAIR:Communication:501714663 |
ISS: Inferred from Sequence or Structural Similarity |
Pfam:PF00861 |
P |
From TAIR |
||
|
NOT |
GO:0005794 |
Golgi apparatus |
TAIR:Publication:501747810 |
RCA: Inferred from Reviewed Computational Analysis |
C |
From TAIR |
| |
| edit table |
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 1.4 Mathieu O et al. (2003) Identification and characterization of transcription factor IIIA and ribosomal protein L5 from Arabidopsis thaliana. Nucleic Acids Res 31: 2424-33 PubMed GONUTS page
- ↑ Shimaoka T et al. (2004) Isolation of intact vacuoles and proteomic analysis of tonoplast from suspension-cultured cells of Arabidopsis thaliana. Plant Cell Physiol 45: 672-83 PubMed GONUTS page
- ↑ Ito J et al. (2011) Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. J Proteome Res 10: 1571-82 PubMed GONUTS page
- ↑ Benschop JJ et al. (2007) Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. Mol Cell Proteomics 6: 1198-214 PubMed GONUTS page
- ↑ 5.0 5.1 5.2 Fujikura U et al. (2009) Coordination of cell proliferation and cell expansion mediated by ribosome-related processes in the leaves of Arabidopsis thaliana. Plant J 59: 499-508 PubMed GONUTS page
- ↑ Kleffmann T et al. (2004) The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. Curr Biol 14: 354-62 PubMed GONUTS page
- ↑ Zybailov B et al. (2008) Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. PLoS One 3: e1994 PubMed GONUTS page
- ↑ Pinon V et al. (2008) Three PIGGYBACK genes that specifically influence leaf patterning encode ribosomal proteins. Development 135: 1315-24 PubMed GONUTS page
- ↑ Mitra SK et al. (2007) Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. J Proteome Res 6: 1933-50 PubMed GONUTS page
- ↑ Carroll AJ et al. (2008) Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. Mol Cell Proteomics 7: 347-69 PubMed GONUTS page
- ↑ Chang IF et al. (2005) Proteomic characterization of evolutionarily conserved and variable proteins of Arabidopsis cytosolic ribosomes. Plant Physiol 137: 848-62 PubMed GONUTS page
- ↑ 12.0 12.1 Giavalisco P et al. (2005) High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. Plant Mol Biol 57: 577-91 PubMed GONUTS page
- ↑ Parsons HT et al. (2012) Isolation and proteomic characterization of the Arabidopsis Golgi defines functional and novel components involved in plant cell wall biosynthesis. Plant Physiol 159: 12-26 PubMed GONUTS page
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