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TAIR:AT5G22650

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Contents

Species (Taxon ID) Arabidopsis thaliana (thale cress) (taxon:3702)
Gene Name(s) AT5G22650 ( synonyms: AT5G22650, HD2B, HDT02, HDT2, ATHD2B, HDA4, HD2, ATHD2, HISTONE DEACETYLASE 2B, HISTONE DEACETYLASE 2, ARABIDOPSIS HISTONE DEACETYLASE 2, MDJ22.7, MDJ22_7, HISTONE DEACETYLASE )
Protein Name(s) AT5G22650,
External Links
TAIR locus:2162479

Annotations

Qualifier GO ID GO term name Reference(s) Evidence Code with/from Aspect Notes Status
GO:0004407

histone deacetylase activity

TAIR:Publication:474
PMID:10792817[1]

ISS: Inferred from Sequence or Structural Similarity

GB:AF026917

F

From TAIR

GO:0004407

histone deacetylase activity

TAIR:Publication:501682935
PMID:12466527[2]

ISS: Inferred from Sequence or Structural Similarity

F

From TAIR

GO:0005730

nucleolus

TAIR:Publication:501720988
PMID:17293570[3]

TAS: Traceable Author Statement

C

From TAIR

GO:0005829

cytosol

TAIR:Publication:501724483
PMID:18433157[4]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0009294

DNA mediated transformation

TAIR:Publication:501723200
PMID:17827277[5]

IMP: Inferred from Mutant Phenotype

P

From TAIR

GO:0009944

polarity specification of adaxial/abaxial axis

TAIR:Publication:501720988
PMID:17293570[3]

IMP: Inferred from Mutant Phenotype

P

From TAIR

GO:0016481

negative regulation of transcription

TAIR:Publication:501705835
PMID:12694598[6]

IDA: Inferred from Direct Assay

P

From TAIR


Notes

References

See Help:References for how to manage references in GONUTS.
  1. Wu K et al. (2000) Functional analysis of HD2 histone deacetylase homologues in Arabidopsis thaliana. Plant J 22: 19-27 PubMed GONUTS page
  2. Pandey R et al. (2002) Analysis of histone acetyltransferase and histone deacetylase families of Arabidopsis thaliana suggests functional diversification of chromatin modification among multicellular eukaryotes. Nucleic Acids Res 30: 5036-55 PubMed GONUTS page
  3. 3.0 3.1 Ueno Y et al. (2007) Histone deacetylases and ASYMMETRIC LEAVES2 are involved in the establishment of polarity in leaves of Arabidopsis. Plant Cell 19: 445-57 PubMed GONUTS page
  4. de la Fuente van Bentem S et al. (2008) Site-specific phosphorylation profiling of Arabidopsis proteins by mass spectrometry and peptide chip analysis. J Proteome Res 7: 2458-70 PubMed GONUTS page
  5. Crane YM & Gelvin SB (2007) RNAi-mediated gene silencing reveals involvement of Arabidopsis chromatin-related genes in Agrobacterium-mediated root transformation. Proc Natl Acad Sci U S A 104: 15156-61 PubMed GONUTS page
  6. Wu K et al. (2003) Repression of gene expression by Arabidopsis HD2 histone deacetylases. Plant J 34: 241-7 PubMed GONUTS page
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