Ambox notice.png

GONUTS is under stress! The website is currently experiencing long-wait times and frequent time-outs due to the record number of students, groups, and annotations related to CACAO this semester. We are currently working on increasing performance -- please accept our apologies for the technical difficulties.

You can help reduce stress on the server by:

  1. not reloading pages frequently - this just adds
  2. opening links in new windows (so you can read the old page)

TAIR:AT2G25850

From GONUTS
Jump to: navigation, search

Contents

Species (Taxon ID) Arabidopsis thaliana (thale cress) (taxon:3702)
Gene Name(s) PAPS2 ( synonyms: AT2G25850, AT2G25850.1, F17H15.12, F17H15_12, AT2G25850.2, AT2G25850.3, AT2G25850.4, PAPS2, poly(A) polymerase 2 )
Protein Name(s) poly(A) polymerase 2, AT2G25850,
External Links
TAIR locus:2043560

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0003723

RNA binding

TAIR:AnalysisReference:501748310

IEA: Inferred from Electronic Annotation

INTERPRO:IPR007010
INTERPRO:IPR011068

F

From TAIR

GO:0003723

RNA binding

TAIR:AnalysisReference:501748310

IEA: Inferred from Electronic Annotation

INTERPRO:IPR007010
INTERPRO:IPR011068

F

From TAIR

GO:0003723

RNA binding

TAIR:AnalysisReference:501748310

IEA: Inferred from Electronic Annotation

INTERPRO:IPR007010
INTERPRO:IPR011068

F

From TAIR

GO:0003723

RNA binding

TAIR:AnalysisReference:501748310

IEA: Inferred from Electronic Annotation

INTERPRO:IPR007010
INTERPRO:IPR011068

F

From TAIR

GO:0004652

polynucleotide adenylyltransferase activity

TAIR:AnalysisReference:501748310

IEA: Inferred from Electronic Annotation

INTERPRO:IPR007010
INTERPRO:IPR007012
INTERPRO:IPR014492

F

From TAIR

GO:0004652

polynucleotide adenylyltransferase activity

TAIR:AnalysisReference:501748310

IEA: Inferred from Electronic Annotation

INTERPRO:IPR007010
INTERPRO:IPR007012
INTERPRO:IPR014492

F

From TAIR

GO:0004652

polynucleotide adenylyltransferase activity

TAIR:AnalysisReference:501748310

IEA: Inferred from Electronic Annotation

INTERPRO:IPR007010
INTERPRO:IPR007012
INTERPRO:IPR014492

F

From TAIR

GO:0004652

polynucleotide adenylyltransferase activity

TAIR:AnalysisReference:501748310

IEA: Inferred from Electronic Annotation

INTERPRO:IPR007010
INTERPRO:IPR007012
INTERPRO:IPR014492

F

From TAIR

GO:0005515

protein binding

TAIR:Publication:501683342
PMID:12602868[1]

IPI: Inferred from Physical Interaction

UniProtKB:Q9LKF9

F

From TAIR

GO:0005515

protein binding

TAIR:Publication:501713087
PMID:15297145[2]

IPI: Inferred from Physical Interaction

Tair:gene:2043559

F

From TAIR

GO:0005515

protein binding

TAIR:Publication:501713087
PMID:15297145[2]

IPI: Inferred from Physical Interaction

Tair:gene:3440542

F

From TAIR

GO:0005515

protein binding

TAIR:Publication:501719773
PMID:16897494[3]

IPI: Inferred from Physical Interaction

UniProtKB:A9LNK9

F

From TAIR

GO:0005515

protein binding

TAIR:Publication:501719773
PMID:16897494[3]

IPI: Inferred from Physical Interaction

UniProtKB:Q9LKF9

F

From TAIR

GO:0005515

protein binding

TAIR:Publication:501724763
PMID:18479511[4]

IPI: Inferred from Physical Interaction

UniProtKB:A9LNK9

F

From TAIR

GO:0005634

nucleus

TAIR:AnalysisReference:501748310

IEA: Inferred from Electronic Annotation

INTERPRO:IPR007010
INTERPRO:IPR014492

C

From TAIR

GO:0005634

nucleus

TAIR:AnalysisReference:501748310

IEA: Inferred from Electronic Annotation

INTERPRO:IPR007010
INTERPRO:IPR014492

C

From TAIR

GO:0005634

nucleus

TAIR:AnalysisReference:501748310

IEA: Inferred from Electronic Annotation

INTERPRO:IPR007010
INTERPRO:IPR014492

C

From TAIR

GO:0005634

nucleus

TAIR:AnalysisReference:501748310

IEA: Inferred from Electronic Annotation

INTERPRO:IPR007010
INTERPRO:IPR014492

C

From TAIR

GO:0005634

nucleus

TAIR:Publication:501713087
PMID:15297145[2]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0005634

nucleus

TAIR:Publication:501735796
PMID:19956626[5]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0006351

transcription, DNA-dependent

TAIR:AnalysisReference:501748310

IEA: Inferred from Electronic Annotation

INTERPRO:IPR007012

P

From TAIR

GO:0006351

transcription, DNA-dependent

TAIR:AnalysisReference:501748310

IEA: Inferred from Electronic Annotation

INTERPRO:IPR007012

P

From TAIR

GO:0006351

transcription, DNA-dependent

TAIR:AnalysisReference:501748310

IEA: Inferred from Electronic Annotation

INTERPRO:IPR007012

P

From TAIR

GO:0006351

transcription, DNA-dependent

TAIR:AnalysisReference:501748310

IEA: Inferred from Electronic Annotation

INTERPRO:IPR007012

P

From TAIR

GO:0016779

nucleotidyltransferase activity

TAIR:AnalysisReference:501748310

IEA: Inferred from Electronic Annotation

INTERPRO:IPR002934
INTERPRO:IPR011068

F

From TAIR

GO:0016779

nucleotidyltransferase activity

TAIR:AnalysisReference:501748310

IEA: Inferred from Electronic Annotation

INTERPRO:IPR002934
INTERPRO:IPR011068

F

From TAIR

GO:0016779

nucleotidyltransferase activity

TAIR:AnalysisReference:501748310

IEA: Inferred from Electronic Annotation

INTERPRO:IPR002934
INTERPRO:IPR011068

F

From TAIR

GO:0016779

nucleotidyltransferase activity

TAIR:AnalysisReference:501748310

IEA: Inferred from Electronic Annotation

INTERPRO:IPR002934
INTERPRO:IPR011068

F

From TAIR

GO:0016779

nucleotidyltransferase activity

TAIR:Communication:501714663

ISS: Inferred from Sequence or Structural Similarity

Pfam:PF01909

F

From TAIR

GO:0031123

RNA 3'-end processing

TAIR:AnalysisReference:501748310

IEA: Inferred from Electronic Annotation

INTERPRO:IPR011068

P

From TAIR

GO:0031123

RNA 3'-end processing

TAIR:AnalysisReference:501748310

IEA: Inferred from Electronic Annotation

INTERPRO:IPR011068

P

From TAIR

GO:0031123

RNA 3'-end processing

TAIR:AnalysisReference:501748310

IEA: Inferred from Electronic Annotation

INTERPRO:IPR011068

P

From TAIR

GO:0031123

RNA 3'-end processing

TAIR:AnalysisReference:501748310

IEA: Inferred from Electronic Annotation

INTERPRO:IPR011068

P

From TAIR

GO:0043631

RNA polyadenylation

TAIR:AnalysisReference:501748310

IEA: Inferred from Electronic Annotation

INTERPRO:IPR007010
INTERPRO:IPR014492

P

From TAIR

GO:0043631

RNA polyadenylation

TAIR:AnalysisReference:501748310

IEA: Inferred from Electronic Annotation

INTERPRO:IPR007010
INTERPRO:IPR014492

P

From TAIR

GO:0043631

RNA polyadenylation

TAIR:AnalysisReference:501748310

IEA: Inferred from Electronic Annotation

INTERPRO:IPR007010
INTERPRO:IPR014492

P

From TAIR

GO:0043631

RNA polyadenylation

TAIR:AnalysisReference:501748310

IEA: Inferred from Electronic Annotation

INTERPRO:IPR007010
INTERPRO:IPR014492

P

From TAIR

GO:0043631

RNA polyadenylation

TAIR:Publication:501713087
PMID:15297145[2]

IDA: Inferred from Direct Assay

P

From TAIR


Notes

References

See Help:References for how to manage references in GONUTS.
  1. Elliott BJ et al. (2003) An interaction between an Arabidopsis poly(A) polymerase and a homologue of the 100 kDa subunit of CPSF. Plant Mol Biol 51: 373-84 PubMed GONUTS page
  2. 2.0 2.1 2.2 2.3 Addepalli B et al. (2004) Novel alternative splicing of mRNAs encoding poly(A) polymerases in Arabidopsis. Biochim Biophys Acta 1679: 117-28 PubMed GONUTS page
  3. 3.0 3.1 Xu R et al. (2006) The 73 kD subunit of the cleavage and polyadenylation specificity factor (CPSF) complex affects reproductive development in Arabidopsis. Plant Mol Biol 61: 799-815 PubMed GONUTS page
  4. Hunt AG et al. (2008) Arabidopsis mRNA polyadenylation machinery: comprehensive analysis of protein-protein interactions and gene expression profiling. BMC Genomics 9: 220 PubMed GONUTS page
  5. Meeks LR et al. (2009) Characterization of genes encoding poly(A) polymerases in plants: evidence for duplication and functional specialization. PLoS One 4: e8082 PubMed GONUTS page
Personal tools
Namespaces
Variants
Actions
Navigation
Cacao
Journal Clubs
page contributors
Toolbox