Ambox notice.png

GONUTS is under stress! The website is currently experiencing long-wait times and frequent time-outs due to the record number of students, groups, and annotations related to CACAO this semester. We are currently working on increasing performance -- please accept our apologies for the technical difficulties.

You can help reduce stress on the server by:

  1. not reloading pages frequently - this just adds
  2. opening links in new windows (so you can read the old page)

TAIR:AT1G02580

From GONUTS
Jump to: navigation, search

Contents

Species (Taxon ID) Arabidopsis thaliana (thale cress) (taxon:3702)
Gene Name(s) AT1G02580 ( synonyms: AT1G02580, MEA, EMB173, FIS1, SDG5, MEDEA, EMBRYO DEFECTIVE 173, FERTILIZATION INDEPENDENT SEED 1, SET DOMAIN-CONTAINING PROTEIN 5, T14P4.11, T14P4_11 )
Protein Name(s) AT1G02580,
External Links
TAIR locus:2196110

Annotations

Qualifier GO ID GO term name Reference(s) Evidence Code with/from Aspect Notes Status
GO:0003700

transcription factor activity

TAIR:Publication:1345963
PMID:11118137[1]

ISS: Inferred from Sequence or Structural Similarity

F

From TAIR

GO:0005634

nucleus

TAIR:Publication:78
PMID:10962025[2]

IDA: Inferred from Direct Assay

C

From TAIR

GO:0006349

regulation of gene expression by genetic imprinting

TAIR:Publication:501734738
PMID:19783734[3]

IMP: Inferred from Mutant Phenotype

P

From TAIR

GO:0009646

response to absence of light

TAIR:Publication:501682653
PMID:12376626[4]

IEP: Inferred from Expression Pattern

P

From TAIR

GO:0016481

negative regulation of transcription

TAIR:Publication:501719156
PMID:16651654[5]

IMP: Inferred from Mutant Phenotype

P

From TAIR

GO:0043565

sequence-specific DNA binding

TAIR:Publication:501719156
PMID:16651654[5]

IDA: Inferred from Direct Assay

F

From TAIR

GO:0048317

seed morphogenesis

TAIR:Publication:501734738
PMID:19783734[3]

IGI: Inferred from Genetic Interaction

AGI_LocusCode:AT5G54650

P

From TAIR


Notes

References

See Help:References for how to manage references in GONUTS.
  1. Riechmann JL et al. (2000) Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Science 290: 2105-10 PubMed GONUTS page
  2. Luo M et al. (2000) Expression and parent-of-origin effects for FIS2, MEA, and FIE in the endosperm and embryo of developing Arabidopsis seeds. Proc Natl Acad Sci U S A 97: 10637-42 PubMed GONUTS page
  3. 3.0 3.1 Fitz Gerald JN et al. (2009) Polycomb group-dependent imprinting of the actin regulator AtFH5 regulates morphogenesis in Arabidopsis thaliana. Development 136: 3399-404 PubMed GONUTS page
  4. Charrier B et al. (2002) Expression profiling of the whole Arabidopsis shaggy-like kinase multigene family by real-time reverse transcriptase-polymerase chain reaction. Plant Physiol 130: 577-90 PubMed GONUTS page
  5. 5.0 5.1 Baroux C et al. (2006) Dynamic regulatory interactions of Polycomb group genes: MEDEA autoregulation is required for imprinted gene expression in Arabidopsis. Genes Dev 20: 1081-6 PubMed GONUTS page
Personal tools
Namespaces
Variants
Actions
Navigation
Cacao
Journal Clubs
page contributors
Toolbox