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TAIR:AT1G01040
Contents |
| Species (Taxon ID) | Arabidopsis thaliana (thale cress) (taxon:3702) | |
| Gene Name(s) | AT1G01040 ( synonyms: AT1G01040, DCL1, CAF, SUS1, SIN1, ASU1, EMB76, EMB60, ATDCL1, DICER-LIKE 1, CARPEL FACTORY, SUSPENSOR 1, SHORT INTEGUMENTS 1, ABNORMAL SUSPENSOR 1, EMBRYO DEFECTIVE 76, EMBRYO DEFECTIVE 60, T25K16.4, T25K16_4 ) | |
| Protein Name(s) | AT1G01040, | |
| External Links | ||
| TAIR | locus:2200960 | |
Annotations
| Qualifier | GO ID | GO term name | Reference(s) | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0000910 |
cytokinesis |
TAIR:Publication:1032 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0003725 |
double-stranded RNA binding |
TAIR:Publication:501717798 |
IDA: Inferred from Direct Assay |
F |
From TAIR |
|||
| GO:0004525 |
ribonuclease III activity |
TAIR:Communication:501714663 |
ISS: Inferred from Sequence or Structural Similarity |
INTERPRO:IPR000999 |
F |
From TAIR |
||
| GO:0005515 |
protein binding |
TAIR:Publication:501717798 |
IPI: Inferred from Physical Interaction |
AGI_LocusCode:AT1G09700 |
F |
From TAIR |
||
| GO:0005634 |
nucleus |
TAIR:Publication:501717798 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0005634 |
nucleus |
TAIR:Publication:501721259 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0006396 |
RNA processing |
TAIR:Publication:501682323 |
ISS: Inferred from Sequence or Structural Similarity |
P |
From TAIR |
|||
| GO:0008026 |
ATP-dependent helicase activity |
TAIR:Communication:501714663 |
ISS: Inferred from Sequence or Structural Similarity |
INTERPRO:IPR001410 |
F |
From TAIR |
||
| GO:0009616 |
virus induced gene silencing |
TAIR:Publication:501720410 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0009880 |
embryonic pattern specification |
TAIR:Publication:3740 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0009908 |
flower development |
TAIR:Publication:3740 |
TAS: Traceable Author Statement |
P |
From TAIR |
|||
| GO:0010098 |
suspensor development |
TAIR:Publication:501678309 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0010228 |
vegetative to reproductive phase transition of meristem |
TAIR:Publication:3740 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0010267 |
production of ta-siRNAs involved in RNA interference |
TAIR:Publication:501719090 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0010445 |
nuclear dicing body |
TAIR:Publication:501721376 |
IDA: Inferred from Direct Assay |
C |
From TAIR |
|||
| GO:0010599 |
production of lsiRNA involved in RNA interference |
TAIR:Publication:501723562 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0030422 |
production of siRNA involved in RNA interference |
TAIR:Publication:501722556 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
|||
| GO:0031053 |
primary microRNA processing |
TAIR:Publication:501717767 |
TAS: Traceable Author Statement |
P |
From TAIR |
|||
| GO:0035196 |
production of miRNAs involved in gene silencing by miRNA |
TAIR:Publication:501719300 |
IGI: Inferred from Genetic Interaction |
P |
From TAIR |
|||
| GO:0035279 |
mRNA cleavage involved in gene silencing by miRNA |
TAIR:Publication:501715201 |
IMP: Inferred from Mutant Phenotype |
P |
From TAIR |
| ||
| edit table |
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Jacobsen SE et al. (1999) Disruption of an RNA helicase/RNAse III gene in Arabidopsis causes unregulated cell division in floral meristems. Development 126: 5231-43 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Hiraguri A et al. (2005) Specific interactions between Dicer-like proteins and HYL1/DRB-family dsRNA-binding proteins in Arabidopsis thaliana. Plant Mol Biol 57: 173-88 PubMed GONUTS page
- ↑ Song L et al. (2007) Arabidopsis primary microRNA processing proteins HYL1 and DCL1 define a nuclear body distinct from the Cajal body. Proc Natl Acad Sci U S A 104: 5437-42 PubMed GONUTS page
- ↑ Park W et al. (2002) CARPEL FACTORY, a Dicer homolog, and HEN1, a novel protein, act in microRNA metabolism in Arabidopsis thaliana. Curr Biol 12: 1484-95 PubMed GONUTS page
- ↑ Blevins T et al. (2006) Four plant Dicers mediate viral small RNA biogenesis and DNA virus induced silencing. Nucleic Acids Res 34: 6233-46 PubMed GONUTS page
- ↑ 6.0 6.1 6.2 Ray A et al. (1996) SHORT INTEGUMENT (SIN1), a gene required for ovule development in Arabidopsis, also controls flowering time. Development 122: 2631-8 PubMed GONUTS page
- ↑ Henderson IR et al. (2006) Dissecting Arabidopsis thaliana DICER function in small RNA processing, gene silencing and DNA methylation patterning. Nat Genet 38: 721-5 PubMed GONUTS page
- ↑ Fang Y & Spector DL (2007) Identification of nuclear dicing bodies containing proteins for microRNA biogenesis in living Arabidopsis plants. Curr Biol 17: 818-23 PubMed GONUTS page
- ↑ Katiyar-Agarwal S et al. (2007) A novel class of bacteria-induced small RNAs in Arabidopsis. Genes Dev 21: 3123-34 PubMed GONUTS page
- ↑ Dunoyer P et al. (2007) Intra- and intercellular RNA interference in Arabidopsis thaliana requires components of the microRNA and heterochromatic silencing pathways. Nat Genet 39: 848-56 PubMed GONUTS page
- ↑ Chen X (2005) MicroRNA biogenesis and function in plants. FEBS Lett 579: 5923-31 PubMed GONUTS page
- ↑ Bouché N et al. (2006) An antagonistic function for Arabidopsis DCL2 in development and a new function for DCL4 in generating viral siRNAs. EMBO J 25: 3347-56 PubMed GONUTS page
- ↑ Allen E et al. (2005) microRNA-directed phasing during trans-acting siRNA biogenesis in plants. Cell 121: 207-21 PubMed GONUTS page
