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SGD:SNX4
Contents |
| Species (Taxon ID) | Saccharomyces cerevisiae (baker's yeast) (taxon:4932) | |
| Gene Name(s) | SNX4 ( synonyms: YJL036W, ATG24, CVT13 ) | |
| Protein Name(s) | Sorting nexin, | |
| External Links | ||
| SGD | S000003573 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0000300 |
peripheral to membrane of membrane fraction |
SGD_REF:S000070289 |
IDA: Inferred from Direct Assay |
C |
From SGD |
|||
| GO:0000407 |
pre-autophagosomal structure |
SGD_REF:S000070289 |
IDA: Inferred from Direct Assay |
C |
From SGD |
|||
| GO:0000407 |
pre-autophagosomal structure |
SGD_REF:S000126495 |
IDA: Inferred from Direct Assay |
C |
From SGD |
|||
| GO:0000422 |
mitochondrion degradation |
SGD_REF:S000132617 |
IMP: Inferred from Mutant Phenotype |
P |
From SGD |
|||
| GO:0005737 |
cytoplasm |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0963 |
C |
From SGD |
||
| GO:0005737 |
cytoplasm |
SGD_REF:S000148671 |
IEA: Inferred from Electronic Annotation |
UniProtKB-SubCell:SL-0086 |
C |
From SGD |
||
| GO:0005768 |
endosome |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0967 |
C |
From SGD |
||
| GO:0005769 |
early endosome |
SGD_REF:S000122446 |
IDA: Inferred from Direct Assay |
C |
From SGD |
|||
| GO:0005829 |
cytosol |
SGD_REF:S000070289 |
IDA: Inferred from Direct Assay |
C |
From SGD |
|||
| GO:0006623 |
protein targeting to vacuole |
SGD_REF:S000072811 |
IMP: Inferred from Mutant Phenotype |
P |
From SGD |
|||
| GO:0006810 |
transport |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0813 |
P |
From SGD |
||
| GO:0007154 |
cell communication |
SGD_REF:S000124036 |
IEA: Inferred from Electronic Annotation |
P |
From SGD |
|||
| GO:0008289 |
lipid binding |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0446 |
F |
From SGD |
||
| GO:0010008 |
endosome membrane |
SGD_REF:S000148671 |
IEA: Inferred from Electronic Annotation |
UniProtKB-SubCell:SL-0100 |
C |
From SGD |
||
| GO:0015031 |
protein transport |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0653 |
P |
From SGD |
||
| GO:0016020 |
membrane |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0472 |
C |
From SGD |
||
| GO:0016020 |
membrane |
SGD_REF:S000148671 |
IEA: Inferred from Electronic Annotation |
UniProtKB-SubCell:SL-0162 |
C |
From SGD |
||
| GO:0032258 |
CVT pathway |
SGD_REF:S000070289 |
IMP: Inferred from Mutant Phenotype |
P |
From SGD |
|||
| GO:0032258 |
CVT pathway |
SGD_REF:S000072811 |
IMP: Inferred from Mutant Phenotype |
P |
From SGD |
|||
| GO:0032266 |
phosphatidylinositol-3-phosphate binding |
SGD_REF:S000072811 |
IDA: Inferred from Direct Assay |
F |
From SGD |
|||
| GO:0032266 |
phosphatidylinositol-3-phosphate binding |
SGD_REF:S000118872 |
IDA: Inferred from Direct Assay |
F |
From SGD |
|||
| GO:0034498 |
early endosome to Golgi transport |
SGD_REF:S000072811 |
IGI: Inferred from Genetic Interaction |
SGD:S000002833 |
P |
From SGD |
||
| GO:0034498 |
early endosome to Golgi transport |
SGD_REF:S000072811 |
IMP: Inferred from Mutant Phenotype |
P |
From SGD |
|||
| GO:0034498 |
early endosome to Golgi transport |
SGD_REF:S000072811 |
IPI: Inferred from Physical Interaction |
SGD:S000002833 |
P |
From SGD |
||
| GO:0034727 |
piecemeal microautophagy of nucleus |
SGD_REF:S000127377 |
IMP: Inferred from Mutant Phenotype |
P |
From SGD |
|||
| GO:0035091 |
phosphatidylinositol binding |
SGD_REF:S000124036 |
IEA: Inferred from Electronic Annotation |
F |
From SGD |
| ||
| edit table |
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 Nice DC et al. (2002) Cooperative binding of the cytoplasm to vacuole targeting pathway proteins, Cvt13 and Cvt20, to phosphatidylinositol 3-phosphate at the pre-autophagosomal structure is required for selective autophagy. J Biol Chem 277: 30198-207 PubMed GONUTS page
- ↑ Ma J et al. (2008) Localization of autophagy-related proteins in yeast using a versatile plasmid-based resource of fluorescent protein fusions. Autophagy 4: 792-800 PubMed GONUTS page
- ↑ Kanki T et al. (2009) A genomic screen for yeast mutants defective in selective mitochondria autophagy. Mol Biol Cell 20: 4730-8 PubMed GONUTS page
- ↑ Strochlic TI et al. (2007) Grd19/Snx3p functions as a cargo-specific adapter for retromer-dependent endocytic recycling. J Cell Biol 177: 115-25 PubMed GONUTS page
- ↑ 5.0 5.1 5.2 5.3 5.4 5.5 Hettema EH et al. (2003) Retromer and the sorting nexins Snx4/41/42 mediate distinct retrieval pathways from yeast endosomes. EMBO J 22: 548-57 PubMed GONUTS page
- ↑ Yu JW & Lemmon MA (2001) All phox homology (PX) domains from Saccharomyces cerevisiae specifically recognize phosphatidylinositol 3-phosphate. J Biol Chem 276: 44179-84 PubMed GONUTS page
- ↑ Krick R et al. (2008) Piecemeal microautophagy of the nucleus requires the core macroautophagy genes. Mol Biol Cell 19: 4492-505 PubMed GONUTS page
