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SGD:SNR6
Contents |
| Species (Taxon ID) | Saccharomyces cerevisiae (baker's yeast) (taxon:4932) | |
| Gene Name(s) | SNR6 ( synonyms: snR6 ) | |
| Protein Name(s) | U6 spliceosomal RNA (U6 snRNA), interacts with U4, | |
| External Links | ||
| SGD | S000006494 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0000388 |
spliceosome conformational change to release U4 (or U4atac) and U1 (or U11) |
SGD_REF:S000124366 |
IMP: Inferred from Mutant Phenotype |
P |
From SGD |
|||
| GO:0000398 |
nuclear mRNA splicing, via spliceosome |
SGD_REF:S000050382 |
IPI: Inferred from Physical Interaction |
P |
From SGD |
|||
| GO:0000398 |
nuclear mRNA splicing, via spliceosome |
SGD_REF:S000050382 |
ISS: Inferred from Sequence or Structural Similarity |
P |
From SGD |
|||
| GO:0005688 |
U6 snRNP |
SGD_REF:S000066234 |
IDA: Inferred from Direct Assay |
C |
From SGD |
|||
| GO:0005688 |
U6 snRNP |
SGD_REF:S000069987 |
TAS: Traceable Author Statement |
C |
From SGD |
|||
| GO:0017069 |
snRNA binding |
SGD_REF:S000050382 |
IPI: Inferred from Physical Interaction |
SGD:S000006499 |
F |
From SGD |
||
| GO:0046540 |
U4/U6 x U5 tri-snRNP complex |
SGD_REF:S000039461 |
IDA: Inferred from Direct Assay |
C |
From SGD |
|||
| GO:0046540 |
U4/U6 x U5 tri-snRNP complex |
SGD_REF:S000056376 |
IDA: Inferred from Direct Assay |
C |
From SGD |
| ||
| edit table |
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ McManus CJ et al. (2007) A dynamic bulge in the U6 RNA internal stem-loop functions in spliceosome assembly and activation. RNA 13: 2252-65 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Siliciano PG et al. (1987) An essential snRNA from S. cerevisiae has properties predicted for U4, including interaction with a U6-like snRNA. Cell 50: 585-92 PubMed GONUTS page
- ↑ Stevens SW et al. (2001) Biochemical and genetic analyses of the U5, U6, and U4/U6 x U5 small nuclear ribonucleoproteins from Saccharomyces cerevisiae. RNA 7: 1543-53 PubMed GONUTS page
- ↑ Guthrie C & Patterson B (1988) Spliceosomal snRNAs. Annu Rev Genet 22: 387-419 PubMed GONUTS page
- ↑ Gottschalk A et al. (1999) Identification by mass spectrometry and functional analysis of novel proteins of the yeast [U4/U6.U5] tri-snRNP. EMBO J 18: 4535-48 PubMed GONUTS page
- ↑ Stevens SW & Abelson J (1999) Purification of the yeast U4/U6.U5 small nuclear ribonucleoprotein particle and identification of its proteins. Proc Natl Acad Sci U S A 96: 7226-31 PubMed GONUTS page
