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SGD:SEN2
Contents |
| Species (Taxon ID) | Saccharomyces cerevisiae (baker's yeast) (taxon:4932) | |
| Gene Name(s) | SEN2 ( synonyms: YLR105C ) | |
| Protein Name(s) | Subunit of the tRNA splicing endonuclease, | |
| External Links | ||
| SGD | S000004095 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0000213 |
tRNA-intron endonuclease activity |
IMP: Inferred from Mutant Phenotype |
F |
Fig 2 shows sen2 gave least amount of pre-tRNA, i.e. shows the tRNA splicing function of the gene. |
complete | |||
| GO:0000213 |
tRNA-intron endonuclease activity |
SGD_REF:S000049224 |
IMP: Inferred from Mutant Phenotype |
F |
From SGD |
|||
| GO:0000213 |
tRNA-intron endonuclease activity |
SGD_REF:S000049482 |
IDA: Inferred from Direct Assay |
F |
From SGD |
|||
| GO:0000213 |
tRNA-intron endonuclease activity |
SGD_REF:S000124036 |
IEA: Inferred from Electronic Annotation |
F |
From SGD |
|||
| GO:0000213 |
tRNA-intron endonuclease activity |
SGD_REF:S000124037 |
IEA: Inferred from Electronic Annotation |
F |
From SGD |
|||
| GO:0000214 |
tRNA-intron endonuclease complex |
SGD_REF:S000049482 |
IDA: Inferred from Direct Assay |
C |
From SGD |
|||
| GO:0000214 |
tRNA-intron endonuclease complex |
SGD_REF:S000124036 |
IEA: Inferred from Electronic Annotation |
C |
From SGD |
|||
| GO:0000379 |
tRNA-type intron splice site recognition and cleavage |
SGD_REF:S000049224 |
IMP: Inferred from Mutant Phenotype |
P |
From SGD |
|||
| GO:0000379 |
tRNA-type intron splice site recognition and cleavage |
SGD_REF:S000049482 |
IDA: Inferred from Direct Assay |
P |
From SGD |
|||
| GO:0003676 |
nucleic acid binding |
SGD_REF:S000124036 |
IEA: Inferred from Electronic Annotation |
F |
From SGD |
|||
| GO:0004518 |
nuclease activity |
SGD_REF:S000124036 |
IEA: Inferred from Electronic Annotation |
F |
From SGD |
|||
| GO:0004518 |
nuclease activity |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0540 |
F |
From SGD |
||
| GO:0004519 |
endonuclease activity |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0255 |
F |
From SGD |
||
| GO:0005634 |
nucleus |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0539 |
C |
From SGD |
||
| GO:0005634 |
nucleus |
SGD_REF:S000148671 |
IEA: Inferred from Electronic Annotation |
UniProtKB-SubCell:SL-0191 |
C |
From SGD |
||
| GO:0005739 |
mitochondrion |
SGD_REF:S000117178 |
IDA: Inferred from Direct Assay |
C |
From SGD |
|||
| GO:0005739 |
mitochondrion |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0496 |
C |
From SGD |
||
| GO:0005741 |
mitochondrial outer membrane |
SGD_REF:S000076331 |
IDA: Inferred from Direct Assay |
C |
From SGD |
|||
| GO:0005741 |
mitochondrial outer membrane |
SGD_REF:S000076331 |
IMP: Inferred from Mutant Phenotype |
C |
From SGD |
|||
| GO:0005741 |
mitochondrial outer membrane |
SGD_REF:S000114057 |
IDA: Inferred from Direct Assay |
C |
From SGD |
|||
| GO:0005741 |
mitochondrial outer membrane |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-1000 |
C |
From SGD |
||
| GO:0005741 |
mitochondrial outer membrane |
SGD_REF:S000148671 |
IEA: Inferred from Electronic Annotation |
UniProtKB-SubCell:SL-0172 |
C |
From SGD |
||
| GO:0006388 |
tRNA splicing, via endonucleolytic cleavage and ligation |
SGD_REF:S000124036 |
IEA: Inferred from Electronic Annotation |
P |
From SGD |
|||
| GO:0008033 |
tRNA processing |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0819 |
P |
From SGD |
||
| GO:0012505 |
endomembrane system |
SGD_REF:S000148671 |
IEA: Inferred from Electronic Annotation |
UniProtKB-SubCell:SL-0147 |
C |
From SGD |
||
| GO:0016020 |
membrane |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0472 |
C |
From SGD |
||
| GO:0016787 |
hydrolase activity |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0378 |
F |
From SGD |
||
| GO:0090305 |
nucleic acid phosphodiester bond hydrolysis |
SGD_REF:S000124036 |
IEA: Inferred from Electronic Annotation |
P |
From SGD |
| ||
| edit table |
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Yoshihisa T et al. (2007) Cytoplasmic splicing of tRNA in Saccharomyces cerevisiae. Genes Cells 12: 285-97 PubMed GONUTS page
- ↑ 2.0 2.1 Ho CK et al. (1990) Accumulation of pre-tRNA splicing '2/3' intermediates in a Saccharomyces cerevisiae mutant. EMBO J 9: 1245-52 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 Trotta CR et al. (1997) The yeast tRNA splicing endonuclease: a tetrameric enzyme with two active site subunits homologous to the archaeal tRNA endonucleases. Cell 89: 849-58 PubMed GONUTS page
- ↑ Reinders J et al. (2006) Toward the complete yeast mitochondrial proteome: multidimensional separation techniques for mitochondrial proteomics. J Proteome Res 5: 1543-54 PubMed GONUTS page
- ↑ 5.0 5.1 Yoshihisa T et al. (2003) Possibility of cytoplasmic pre-tRNA splicing: the yeast tRNA splicing endonuclease mainly localizes on the mitochondria. Mol Biol Cell 14: 3266-79 PubMed GONUTS page
- ↑ Zahedi RP et al. (2006) Proteomic analysis of the yeast mitochondrial outer membrane reveals accumulation of a subclass of preproteins. Mol Biol Cell 17: 1436-50 PubMed GONUTS page
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