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SGD:RSC30
Contents |
| Species (Taxon ID) | Saccharomyces cerevisiae (baker's yeast) (taxon:4932) | |
| Gene Name(s) | RSC30 ( synonyms: YHR056C ) | |
| Protein Name(s) | Component of the RSC chromatin remodeling complex, | |
| External Links | ||
| SGD | S000001098 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0000981 |
sequence-specific DNA binding RNA polymerase II transcription factor activity |
SGD_REF:S000124036 |
IEA: Inferred from Electronic Annotation |
F |
From SGD |
|||
| GO:0003677 |
DNA binding |
SGD_REF:S000060732 |
ISS: Inferred from Sequence or Structural Similarity |
F |
From SGD |
|||
| GO:0003677 |
DNA binding |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0238 |
F |
From SGD |
||
| GO:0005634 |
nucleus |
SGD_REF:S000124036 |
IEA: Inferred from Electronic Annotation |
C |
From SGD |
|||
| GO:0005634 |
nucleus |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0539 |
C |
From SGD |
||
| GO:0005634 |
nucleus |
SGD_REF:S000148671 |
IEA: Inferred from Electronic Annotation |
UniProtKB-SubCell:SL-0191 |
C |
From SGD |
||
| GO:0006303 |
double-strand break repair via nonhomologous end joining |
SGD_REF:S000081821 |
IDA: Inferred from Direct Assay |
P |
From SGD |
|||
| GO:0006303 |
double-strand break repair via nonhomologous end joining |
SGD_REF:S000081821 |
IMP: Inferred from Mutant Phenotype |
P |
From SGD |
|||
| GO:0006337 |
nucleosome disassembly |
SGD_REF:S000127685 |
IDA: Inferred from Direct Assay |
P |
From SGD |
|||
| GO:0006351 |
transcription, DNA-dependent |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0804 |
P |
From SGD |
||
| GO:0006355 |
regulation of transcription, DNA-dependent |
SGD_REF:S000060732 |
IMP: Inferred from Mutant Phenotype |
P |
From SGD |
|||
| GO:0006355 |
regulation of transcription, DNA-dependent |
SGD_REF:S000124036 |
IEA: Inferred from Electronic Annotation |
P |
From SGD |
|||
| GO:0006355 |
regulation of transcription, DNA-dependent |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0805 |
P |
From SGD |
||
| GO:0006357 |
regulation of transcription from RNA polymerase II promoter |
SGD_REF:S000124036 |
IEA: Inferred from Electronic Annotation |
P |
From SGD |
|||
| GO:0006366 |
transcription from RNA polymerase II promoter |
SGD_REF:S000124036 |
IEA: Inferred from Electronic Annotation |
P |
From SGD |
|||
| GO:0006368 |
transcription elongation from RNA polymerase II promoter |
SGD_REF:S000119500 |
IDA: Inferred from Direct Assay |
P |
From SGD |
|||
| GO:0008270 |
zinc ion binding |
SGD_REF:S000124036 |
IEA: Inferred from Electronic Annotation |
F |
From SGD |
|||
| GO:0016568 |
chromatin modification |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0156 |
P |
From SGD |
||
| GO:0016586 |
RSC complex |
SGD_REF:S000060732 |
IDA: Inferred from Direct Assay |
C |
From SGD |
|||
| GO:0016586 |
RSC complex |
SGD_REF:S000074929 |
IDA: Inferred from Direct Assay |
C |
From SGD |
|||
| GO:0043044 |
ATP-dependent chromatin remodeling |
SGD_REF:S000074929 |
IDA: Inferred from Direct Assay |
P |
From SGD |
|||
| GO:0043565 |
sequence-specific DNA binding |
SGD_REF:S000128778 |
IDA: Inferred from Direct Assay |
F |
From SGD |
|||
| GO:0043565 |
sequence-specific DNA binding |
SGD_REF:S000129025 |
IDA: Inferred from Direct Assay |
F |
From SGD |
|||
| GO:0046872 |
metal ion binding |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0479 |
F |
From SGD |
||
|
contributes_to |
GO:0015616 |
DNA translocase activity |
SGD_REF:S000074929 |
IDA: Inferred from Direct Assay |
F |
From SGD |
| |
| edit table |
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Angus-Hill ML et al. (2001) A Rsc3/Rsc30 zinc cluster dimer reveals novel roles for the chromatin remodeler RSC in gene expression and cell cycle control. Mol Cell 7: 741-51 PubMed GONUTS page
- ↑ 2.0 2.1 Shim EY et al. (2005) The yeast chromatin remodeler RSC complex facilitates end joining repair of DNA double-strand breaks. Mol Cell Biol 25: 3934-44 PubMed GONUTS page
- ↑ Lorch Y et al. (2006) Chromatin remodeling by nucleosome disassembly in vitro. Proc Natl Acad Sci U S A 103: 3090-3 PubMed GONUTS page
- ↑ Carey M et al. (2006) RSC exploits histone acetylation to abrogate the nucleosomal block to RNA polymerase II elongation. Mol Cell 24: 481-7 PubMed GONUTS page
- ↑ 5.0 5.1 5.2 Saha A et al. (2002) Chromatin remodeling by RSC involves ATP-dependent DNA translocation. Genes Dev 16: 2120-34 PubMed GONUTS page
- ↑ Badis G et al. (2008) A library of yeast transcription factor motifs reveals a widespread function for Rsc3 in targeting nucleosome exclusion at promoters. Mol Cell 32: 878-87 PubMed GONUTS page
- ↑ Zhu C et al. (2009) High-resolution DNA-binding specificity analysis of yeast transcription factors. Genome Res 19: 556-66 PubMed GONUTS page
