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SGD:RPB9
Contents |
| Species (Taxon ID) | Saccharomyces cerevisiae (baker's yeast) (taxon:4932) | |
| Gene Name(s) | RPB9 ( synonyms: YGL070C, SHI, SSU73 ) | |
| Protein Name(s) | RNA polymerase II subunit B12.6, | |
| External Links | ||
| SGD | S000003038 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0001193 |
maintenance of transcriptional fidelity during DNA-dependent transcription elongation from RNA polymerase II promoter |
SGD_REF:S000114553 |
IMP: Inferred from Mutant Phenotype |
P |
From SGD |
|||
| GO:0001193 |
maintenance of transcriptional fidelity during DNA-dependent transcription elongation from RNA polymerase II promoter |
SGD_REF:S000122886 |
IGI: Inferred from Genetic Interaction |
SGD:S000003011 |
P |
From SGD |
||
| GO:0003676 |
nucleic acid binding |
SGD_REF:S000124036 |
IEA: Inferred from Electronic Annotation |
F |
From SGD |
|||
| GO:0003677 |
DNA binding |
SGD_REF:S000124036 |
IEA: Inferred from Electronic Annotation |
F |
From SGD |
|||
| GO:0003899 |
DNA-directed RNA polymerase activity |
SGD_REF:S000124036 |
IEA: Inferred from Electronic Annotation |
F |
From SGD |
|||
| GO:0003899 |
DNA-directed RNA polymerase activity |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0240 |
F |
From SGD |
||
| GO:0005634 |
nucleus |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0539 |
C |
From SGD |
||
| GO:0005634 |
nucleus |
SGD_REF:S000148671 |
IEA: Inferred from Electronic Annotation |
UniProtKB-SubCell:SL-0191 |
C |
From SGD |
||
| GO:0005665 |
DNA-directed RNA polymerase II, core complex |
SGD_REF:S000042098 |
IDA: Inferred from Direct Assay |
C |
From SGD |
|||
| GO:0005665 |
DNA-directed RNA polymerase II, core complex |
SGD_REF:S000049159 |
IDA: Inferred from Direct Assay |
C |
From SGD |
|||
| GO:0005665 |
DNA-directed RNA polymerase II, core complex |
SGD_REF:S000061012 |
IDA: Inferred from Direct Assay |
C |
From SGD |
|||
| GO:0006281 |
DNA repair |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0234 |
P |
From SGD |
||
| GO:0006283 |
transcription-coupled nucleotide-excision repair |
SGD_REF:S000119171 |
IGI: Inferred from Genetic Interaction |
SGD:S000000318 |
P |
From SGD |
||
| GO:0006351 |
transcription, DNA-dependent |
SGD_REF:S000124036 |
IEA: Inferred from Electronic Annotation |
P |
From SGD |
|||
| GO:0006351 |
transcription, DNA-dependent |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0804 |
P |
From SGD |
||
| GO:0006366 |
transcription from RNA polymerase II promoter |
SGD_REF:S000120254 |
IMP: Inferred from Mutant Phenotype |
P |
From SGD |
|||
| GO:0006367 |
transcription initiation from RNA polymerase II promoter |
SGD_REF:S000047690 |
IMP: Inferred from Mutant Phenotype |
P |
From SGD |
|||
| GO:0006974 |
response to DNA damage stimulus |
SGD_REF:S000076175 |
IMP: Inferred from Mutant Phenotype |
P |
From SGD |
|||
| GO:0006974 |
response to DNA damage stimulus |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0227 |
P |
From SGD |
||
| GO:0008270 |
zinc ion binding |
SGD_REF:S000124036 |
IEA: Inferred from Electronic Annotation |
F |
From SGD |
|||
| GO:0046872 |
metal ion binding |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0479 |
F |
From SGD |
||
|
contributes_to |
GO:0003968 |
RNA-directed RNA polymerase activity |
SGD_REF:S000136117 |
IDA: Inferred from Direct Assay |
F |
From SGD |
| |
| edit table |
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Nesser NK et al. (2006) RNA polymerase II subunit Rpb9 is important for transcriptional fidelity in vivo. Proc Natl Acad Sci U S A 103: 3268-73 PubMed GONUTS page
- ↑ Koyama H et al. (2007) Stimulation of RNA polymerase II transcript cleavage activity contributes to maintain transcriptional fidelity in yeast. Genes Cells 12: 547-59 PubMed GONUTS page
- ↑ Woychik NA et al. (1990) Subunits shared by eukaryotic nuclear RNA polymerases. Genes Dev 4: 313-23 PubMed GONUTS page
- ↑ Kolodziej PA et al. (1990) RNA polymerase II subunit composition, stoichiometry, and phosphorylation. Mol Cell Biol 10: 1915-20 PubMed GONUTS page
- ↑ Sayre MH et al. (1992) Reconstitution of transcription with five purified initiation factors and RNA polymerase II from Saccharomyces cerevisiae. J Biol Chem 267: 23376-82 PubMed GONUTS page
- ↑ Li S et al. (2006) Evidence that the transcription elongation function of Rpb9 is involved in transcription-coupled DNA repair in Saccharomyces cerevisiae. Mol Cell Biol 26: 9430-41 PubMed GONUTS page
- ↑ Zaros C et al. (2007) Functional organization of the Rpb5 subunit shared by the three yeast RNA polymerases. Nucleic Acids Res 35: 634-47 PubMed GONUTS page
- ↑ Furter-Graves EM et al. (1994) Role of a small RNA pol II subunit in TATA to transcription start site spacing. Nucleic Acids Res 22: 4932-6 PubMed GONUTS page
- ↑ Chang M et al. (2002) A genome-wide screen for methyl methanesulfonate-sensitive mutants reveals genes required for S phase progression in the presence of DNA damage. Proc Natl Acad Sci U S A 99: 16934-9 PubMed GONUTS page
- ↑ Lehmann E et al. (2007) Molecular basis of RNA-dependent RNA polymerase II activity. Nature 450: 445-9 PubMed GONUTS page
