GONUTS is under stress! The website is currently experiencing long-wait times and frequent time-outs due to the record number of students, groups, and annotations related to CACAO this semester. We are currently working on increasing performance -- please accept our apologies for the technical difficulties.
You can help reduce stress on the server by:
- not reloading pages frequently - this just adds
- opening links in new windows (so you can read the old page)
SGD:RNH70
Contents |
| Species (Taxon ID) | Saccharomyces cerevisiae (baker's yeast) (taxon:4932) | |
| Gene Name(s) | RNH70 ( synonyms: YGR276C, REX1, RNA82 ) | |
| Protein Name(s) | 3'-5' exoribonuclease, | |
| External Links | ||
| SGD | S000003508 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0000175 |
3'-5'-exoribonuclease activity |
SGD_REF:S000044002 |
IMP: Inferred from Mutant Phenotype |
F |
From SGD |
|||
| GO:0000467 |
exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
SGD_REF:S000044002 |
IGI: Inferred from Genetic Interaction |
SGD:S000004097 |
P |
From SGD |
||
| GO:0002107 |
generation of mature 3'-end of 5S rRNA generated by RNA polymerase III |
SGD_REF:S000044002 |
IMP: Inferred from Mutant Phenotype |
P |
From SGD |
|||
| GO:0003676 |
nucleic acid binding |
SGD_REF:S000124036 |
IEA: Inferred from Electronic Annotation |
F |
From SGD |
|||
| GO:0003723 |
RNA binding |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0694 |
F |
From SGD |
||
| GO:0004518 |
nuclease activity |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0540 |
F |
From SGD |
||
| GO:0004527 |
exonuclease activity |
SGD_REF:S000124036 |
IEA: Inferred from Electronic Annotation |
F |
From SGD |
|||
| GO:0004527 |
exonuclease activity |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0269 |
F |
From SGD |
||
| GO:0005622 |
intracellular |
SGD_REF:S000124036 |
IEA: Inferred from Electronic Annotation |
C |
From SGD |
|||
| GO:0005634 |
nucleus |
SGD_REF:S000052595 |
IDA: Inferred from Direct Assay |
C |
From SGD |
|||
| GO:0005634 |
nucleus |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0539 |
C |
From SGD |
||
| GO:0005634 |
nucleus |
SGD_REF:S000148671 |
IEA: Inferred from Electronic Annotation |
UniProtKB-SubCell:SL-0191 |
C |
From SGD |
||
| GO:0006364 |
rRNA processing |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0698 |
P |
From SGD |
||
| GO:0008033 |
tRNA processing |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0819 |
P |
From SGD |
||
| GO:0008408 |
3'-5' exonuclease activity |
SGD_REF:S000044092 |
ISS: Inferred from Sequence or Structural Similarity |
F |
From SGD |
|||
| GO:0016787 |
hydrolase activity |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0378 |
F |
From SGD |
||
| GO:0034415 |
tRNA 3'-trailer cleavage, exonucleolytic |
SGD_REF:S000044002 |
IMP: Inferred from Mutant Phenotype |
P |
From SGD |
|||
| GO:0034415 |
tRNA 3'-trailer cleavage, exonucleolytic |
SGD_REF:S000126376 |
IGI: Inferred from Genetic Interaction |
SGD:S000002209 |
P |
From SGD |
||
| GO:0034415 |
tRNA 3'-trailer cleavage, exonucleolytic |
SGD_REF:S000126376 |
IMP: Inferred from Mutant Phenotype |
P |
From SGD |
|||
| GO:0034476 |
U5 snRNA 3'-end processing |
SGD_REF:S000044002 |
IGI: Inferred from Genetic Interaction |
SGD:S000004097 |
P |
From SGD |
||
| GO:0042254 |
ribosome biogenesis |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0690 |
P |
From SGD |
| |
| edit table |
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 1.4 van Hoof A et al. (2000) Three conserved members of the RNase D family have unique and overlapping functions in the processing of 5S, 5.8S, U4, U5, RNase MRP and RNase P RNAs in yeast. EMBO J 19: 1357-65 PubMed GONUTS page
- ↑ Frank P et al. (1999) Purification of Saccharomyces cerevisiae RNase H(70) and identification of the corresponding gene. FEBS Lett 450: 251-6 PubMed GONUTS page
- ↑ Moser MJ et al. (1997) The proofreading domain of Escherichia coli DNA polymerase I and other DNA and/or RNA exonuclease domains. Nucleic Acids Res 25: 5110-8 PubMed GONUTS page
- ↑ 4.0 4.1 Copela LA et al. (2008) Competition between the Rex1 exonuclease and the La protein affects both Trf4p-mediated RNA quality control and pre-tRNA maturation. RNA 14: 1214-27 PubMed GONUTS page
