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SGD:NUP2
Contents |
| Species (Taxon ID) | Saccharomyces cerevisiae (baker's yeast) (taxon:4932) | |
| Gene Name(s) | NUP2 ( synonyms: YLR335W ) | |
| Protein Name(s) | Nucleoporin involved in nucleocytoplasmic transport, | |
| External Links | ||
| SGD | S000004327 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0000790 |
nuclear chromatin |
SGD_REF:S000114102 |
IDA: Inferred from Direct Assay |
C |
From SGD |
|||
| GO:0000972 |
transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery |
SGD_REF:S000138391 |
IMP: Inferred from Mutant Phenotype |
P |
From SGD |
|||
| GO:0000973 |
posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery |
SGD_REF:S000138391 |
IMP: Inferred from Mutant Phenotype |
P |
From SGD |
|||
| GO:0005198 |
structural molecule activity |
SGD_REF:S000058277 |
TAS: Traceable Author Statement |
F |
From SGD |
|||
| GO:0005634 |
nucleus |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0539 |
C |
From SGD |
||
| GO:0005643 |
nuclear pore |
SGD_REF:S000058277 |
IDA: Inferred from Direct Assay |
C |
From SGD |
|||
| GO:0005643 |
nuclear pore |
SGD_REF:S000124036 |
IEA: Inferred from Electronic Annotation |
C |
From SGD |
|||
| GO:0005643 |
nuclear pore |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0906 |
C |
From SGD |
||
| GO:0005643 |
nuclear pore |
SGD_REF:S000148671 |
IEA: Inferred from Electronic Annotation |
UniProtKB-SubCell:SL-0185 |
C |
From SGD |
||
| GO:0005739 |
mitochondrion |
SGD_REF:S000075100 |
IDA: Inferred from Direct Assay |
C |
From SGD |
|||
| GO:0005739 |
mitochondrion |
SGD_REF:S000117178 |
IDA: Inferred from Direct Assay |
C |
From SGD |
|||
| GO:0006348 |
chromatin silencing at telomere |
SGD_REF:S000114102 |
IMP: Inferred from Mutant Phenotype |
P |
From SGD |
|||
| GO:0006406 |
mRNA export from nucleus |
SGD_REF:S000058277 |
TAS: Traceable Author Statement |
P |
From SGD |
|||
| GO:0006407 |
rRNA export from nucleus |
SGD_REF:S000058277 |
TAS: Traceable Author Statement |
P |
From SGD |
|||
| GO:0006408 |
snRNA export from nucleus |
SGD_REF:S000058277 |
TAS: Traceable Author Statement |
P |
From SGD |
|||
| GO:0006409 |
tRNA export from nucleus |
SGD_REF:S000058277 |
TAS: Traceable Author Statement |
P |
From SGD |
|||
| GO:0006607 |
NLS-bearing substrate import into nucleus |
SGD_REF:S000058277 |
TAS: Traceable Author Statement |
P |
From SGD |
|||
| GO:0006607 |
NLS-bearing substrate import into nucleus |
SGD_REF:S000075845 |
IGI: Inferred from Genetic Interaction |
SGD:S000000063 |
P |
From SGD |
||
| GO:0006608 |
snRNP protein import into nucleus |
SGD_REF:S000058277 |
TAS: Traceable Author Statement |
P |
From SGD |
|||
| GO:0006609 |
mRNA-binding (hnRNP) protein import into nucleus |
SGD_REF:S000058277 |
TAS: Traceable Author Statement |
P |
From SGD |
|||
| GO:0006610 |
ribosomal protein import into nucleus |
SGD_REF:S000058277 |
TAS: Traceable Author Statement |
P |
From SGD |
|||
| GO:0006611 |
protein export from nucleus |
SGD_REF:S000058277 |
TAS: Traceable Author Statement |
P |
From SGD |
|||
| GO:0006612 |
protein targeting to membrane |
SGD_REF:S000123937 |
IMP: Inferred from Mutant Phenotype |
P |
From SGD |
|||
| GO:0006810 |
transport |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0813 |
P |
From SGD |
||
| GO:0006999 |
nuclear pore organization |
SGD_REF:S000058277 |
TAS: Traceable Author Statement |
P |
From SGD |
|||
| GO:0015031 |
protein transport |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0653 |
P |
From SGD |
||
| GO:0016020 |
membrane |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0472 |
C |
From SGD |
||
| GO:0016021 |
integral to membrane |
SGD_REF:S000114049 |
ISM: Inferred from Sequence Model |
C |
From SGD |
|||
| GO:0016973 |
poly(A)+ mRNA export from nucleus |
SGD_REF:S000139600 |
IMP: Inferred from Mutant Phenotype |
P |
From SGD |
|||
| GO:0031965 |
nuclear membrane |
SGD_REF:S000148671 |
IEA: Inferred from Electronic Annotation |
UniProtKB-SubCell:SL-0182 |
C |
From SGD |
||
| GO:0031990 |
mRNA export from nucleus in response to heat stress |
SGD_REF:S000125466 |
IMP: Inferred from Mutant Phenotype |
P |
From SGD |
|||
| GO:0046907 |
intracellular transport |
SGD_REF:S000124036 |
IEA: Inferred from Electronic Annotation |
P |
From SGD |
|||
| GO:0051028 |
mRNA transport |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0509 |
P |
From SGD |
||
| GO:0070481 |
nuclear-transcribed mRNA catabolic process, non-stop decay |
SGD_REF:S000123716 |
IMP: Inferred from Mutant Phenotype |
P |
From SGD |
| ||
| edit table |
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Dilworth DJ et al. (2005) The mobile nucleoporin Nup2p and chromatin-bound Prp20p function in endogenous NPC-mediated transcriptional control. J Cell Biol 171: 955-65 PubMed GONUTS page
- ↑ 2.0 2.1 Light WH et al. (2010) Interaction of a DNA zip code with the nuclear pore complex promotes H2A.Z incorporation and INO1 transcriptional memory. Mol Cell 40: 112-25 PubMed GONUTS page
- ↑ 3.00 3.01 3.02 3.03 3.04 3.05 3.06 3.07 3.08 3.09 3.10 3.11 Fabre E & Hurt E (1997) Yeast genetics to dissect the nuclear pore complex and nucleocytoplasmic trafficking. Annu Rev Genet 31: 277-313 PubMed GONUTS page
- ↑ Sickmann A et al. (2003) The proteome of Saccharomyces cerevisiae mitochondria. Proc Natl Acad Sci U S A 100: 13207-12 PubMed GONUTS page
- ↑ Reinders J et al. (2006) Toward the complete yeast mitochondrial proteome: multidimensional separation techniques for mitochondrial proteomics. J Proteome Res 5: 1543-54 PubMed GONUTS page
- ↑ Strawn LA et al. (2004) Minimal nuclear pore complexes define FG repeat domains essential for transport. Nat Cell Biol 6: 197-206 PubMed GONUTS page
- ↑ King MC et al. (2006) Karyopherin-mediated import of integral inner nuclear membrane proteins. Nature 442: 1003-7 PubMed GONUTS page
- ↑ De Hertogh B et al. (2002) Phylogenetic classification of transporters and other membrane proteins from Saccharomyces cerevisiae. Funct Integr Genomics 2: 154-70 PubMed GONUTS page
- ↑ Powrie EA et al. (2011) A nucleoporin, Nup60p, affects the nuclear and cytoplasmic localization of ASH1 mRNA in S. cerevisiae. RNA 17: 134-44 PubMed GONUTS page
- ↑ Thomsen R et al. (2008) General, rapid, and transcription-dependent fragmentation of nucleolar antigens in S. cerevisiae mRNA export mutants. RNA 14: 706-16 PubMed GONUTS page
- ↑ Wilson MA et al. (2007) A genomic screen in yeast reveals novel aspects of nonstop mRNA metabolism. Genetics 177: 773-84 PubMed GONUTS page
