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SGD:NOP1
Contents |
| Species (Taxon ID) | Saccharomyces cerevisiae (baker's yeast) (taxon:4932) | |
| Gene Name(s) | NOP1 ( synonyms: YDL014W, LOT3 ) | |
| Protein Name(s) | Nucleolar protein, | |
| External Links | ||
| SGD | S000002172 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0000494 |
box C/D snoRNA 3'-end processing |
SGD_REF:S000043312 |
IMP: Inferred from Mutant Phenotype |
P |
From SGD |
|||
| GO:0000494 |
box C/D snoRNA 3'-end processing |
SGD_REF:S000077164 |
IMP: Inferred from Mutant Phenotype |
P |
From SGD |
|||
| GO:0001510 |
RNA methylation |
SGD_REF:S000071539 |
IMP: Inferred from Mutant Phenotype |
P |
From SGD |
|||
| GO:0001510 |
RNA methylation |
SGD_REF:S000071539 |
IPI: Inferred from Physical Interaction |
P |
From SGD |
|||
| GO:0001510 |
RNA methylation |
SGD_REF:S000071539 |
ISS: Inferred from Sequence or Structural Similarity |
P |
From SGD |
|||
| GO:0003723 |
RNA binding |
SGD_REF:S000124036 |
IEA: Inferred from Electronic Annotation |
F |
From SGD |
|||
| GO:0003723 |
RNA binding |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0694 |
F |
From SGD |
||
| GO:0005634 |
nucleus |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0539 |
C |
From SGD |
||
| GO:0005730 |
nucleolus |
SGD_REF:S000052452 |
IDA: Inferred from Direct Assay |
C |
From SGD |
|||
| GO:0005730 |
nucleolus |
SGD_REF:S000069775 |
IDA: Inferred from Direct Assay |
C |
From SGD |
|||
| GO:0005730 |
nucleolus |
SGD_REF:S000148671 |
IEA: Inferred from Electronic Annotation |
UniProtKB-SubCell:SL-0188 |
C |
From SGD |
||
| GO:0006364 |
rRNA processing |
SGD_REF:S000050162 |
IMP: Inferred from Mutant Phenotype |
P |
From SGD |
|||
| GO:0006364 |
rRNA processing |
SGD_REF:S000124036 |
IEA: Inferred from Electronic Annotation |
P |
From SGD |
|||
| GO:0006364 |
rRNA processing |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0698 |
P |
From SGD |
||
| GO:0008033 |
tRNA processing |
SGD_REF:S000124036 |
IEA: Inferred from Electronic Annotation |
P |
From SGD |
|||
| GO:0008168 |
methyltransferase activity |
SGD_REF:S000071539 |
IMP: Inferred from Mutant Phenotype |
F |
From SGD |
|||
| GO:0008168 |
methyltransferase activity |
SGD_REF:S000071539 |
IPI: Inferred from Physical Interaction |
F |
From SGD |
|||
| GO:0008168 |
methyltransferase activity |
SGD_REF:S000071539 |
ISS: Inferred from Sequence or Structural Similarity |
F |
From SGD |
|||
| GO:0008168 |
methyltransferase activity |
SGD_REF:S000124036 |
IEA: Inferred from Electronic Annotation |
F |
From SGD |
|||
| GO:0008168 |
methyltransferase activity |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0489 |
F |
From SGD |
||
| GO:0016740 |
transferase activity |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0808 |
F |
From SGD |
||
| GO:0030529 |
ribonucleoprotein complex |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0687 |
C |
From SGD |
||
| GO:0030686 |
90S preribosome |
SGD_REF:S000086600 |
IDA: Inferred from Direct Assay |
C |
From SGD |
|||
| GO:0031167 |
rRNA methylation |
SGD_REF:S000048318 |
IMP: Inferred from Mutant Phenotype |
P |
From SGD |
|||
| GO:0031428 |
box C/D snoRNP complex |
SGD_REF:S000064243 |
IDA: Inferred from Direct Assay |
C |
From SGD |
|||
| GO:0032040 |
small-subunit processome |
SGD_REF:S000070145 |
IDA: Inferred from Direct Assay |
C |
From SGD |
|||
| GO:0032259 |
methylation |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0489 |
P |
From SGD |
||
| GO:0042254 |
ribosome biogenesis |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0690 |
P |
From SGD |
||
| GO:0043144 |
snoRNA processing |
SGD_REF:S000050162 |
IMP: Inferred from Mutant Phenotype |
P |
From SGD |
|||
|
colocalizes_with |
GO:0005840 |
ribosome |
SGD_REF:S000115662 |
IDA: Inferred from Direct Assay |
C |
From SGD |
| |
| edit table |
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Lafontaine DL & Tollervey D (2000) Synthesis and assembly of the box C+D small nucleolar RNPs. Mol Cell Biol 20: 2650-9 PubMed GONUTS page
- ↑ Morlando M et al. (2004) Coupling between snoRNP assembly and 3' processing controls box C/D snoRNA biosynthesis in yeast. EMBO J 23: 2392-401 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 3.3 3.4 3.5 Galardi S et al. (2002) Purified box C/D snoRNPs are able to reproduce site-specific 2'-O-methylation of target RNA in vitro. Mol Cell Biol 22: 6663-8 PubMed GONUTS page
- ↑ Schimmang T et al. (1989) A yeast nucleolar protein related to mammalian fibrillarin is associated with small nucleolar RNA and is essential for viability. EMBO J 8: 4015-24 PubMed GONUTS page
- ↑ Moy TI et al. (2002) Identification of a role for Saccharomyces cerevisiae Cgr1p in pre-rRNA processing and 60S ribosome subunit synthesis. Microbiology 148: 1081-90 PubMed GONUTS page
- ↑ 6.0 6.1 Tollervey D et al. (1991) The small nucleolar RNP protein NOP1 (fibrillarin) is required for pre-rRNA processing in yeast. EMBO J 10: 573-83 PubMed GONUTS page
- ↑ Grandi P et al. (2002) 90S pre-ribosomes include the 35S pre-rRNA, the U3 snoRNP, and 40S subunit processing factors but predominantly lack 60S synthesis factors. Mol Cell 10: 105-15 PubMed GONUTS page
- ↑ Tollervey D et al. (1993) Temperature-sensitive mutations demonstrate roles for yeast fibrillarin in pre-rRNA processing, pre-rRNA methylation, and ribosome assembly. Cell 72: 443-57 PubMed GONUTS page
- ↑ Watkins NJ et al. (2000) A common core RNP structure shared between the small nucleoar box C/D RNPs and the spliceosomal U4 snRNP. Cell 103: 457-66 PubMed GONUTS page
- ↑ Dragon F et al. (2002) A large nucleolar U3 ribonucleoprotein required for 18S ribosomal RNA biogenesis. Nature 417: 967-70 PubMed GONUTS page
- ↑ Fleischer TC et al. (2006) Systematic identification and functional screens of uncharacterized proteins associated with eukaryotic ribosomal complexes. Genes Dev 20: 1294-307 PubMed GONUTS page
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