GONUTS is under stress! The website is currently experiencing long-wait times and frequent time-outs due to the record number of students, groups, and annotations related to CACAO this semester. We are currently working on increasing performance -- please accept our apologies for the technical difficulties.
You can help reduce stress on the server by:
- not reloading pages frequently - this just adds
- opening links in new windows (so you can read the old page)
SGD:HRP1
Contents |
| Species (Taxon ID) | Saccharomyces cerevisiae (baker's yeast) (taxon:4932) | |
| Gene Name(s) | HRP1 ( synonyms: YOL123W, NAB4, NAB5 ) | |
| Protein Name(s) | Subunit of cleavage factor I, | |
| External Links | ||
| SGD | S000005483 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0000166 |
nucleotide binding |
SGD_REF:S000124036 |
IEA: Inferred from Electronic Annotation |
F |
From SGD |
|||
| GO:0000184 |
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0866 |
P |
From SGD |
||
| GO:0003676 |
nucleic acid binding |
SGD_REF:S000124036 |
IEA: Inferred from Electronic Annotation |
F |
From SGD |
|||
| GO:0003723 |
RNA binding |
SGD_REF:S000052680 |
IDA: Inferred from Direct Assay |
F |
From SGD |
|||
| GO:0003723 |
RNA binding |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0694 |
F |
From SGD |
||
| GO:0003729 |
mRNA binding |
SGD_REF:S000080714 |
IDA: Inferred from Direct Assay |
F |
From SGD |
|||
| GO:0003729 |
mRNA binding |
SGD_REF:S000123768 |
IDA: Inferred from Direct Assay |
F |
From SGD |
|||
| GO:0005634 |
nucleus |
SGD_REF:S000052680 |
IDA: Inferred from Direct Assay |
C |
From SGD |
|||
| GO:0005634 |
nucleus |
SGD_REF:S000069459 |
IDA: Inferred from Direct Assay |
C |
From SGD |
|||
| GO:0005634 |
nucleus |
SGD_REF:S000080288 |
IDA: Inferred from Direct Assay |
C |
From SGD |
|||
| GO:0005634 |
nucleus |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0539 |
C |
From SGD |
||
| GO:0005634 |
nucleus |
SGD_REF:S000148671 |
IEA: Inferred from Electronic Annotation |
UniProtKB-SubCell:SL-0191 |
C |
From SGD |
||
| GO:0005737 |
cytoplasm |
SGD_REF:S000052680 |
IDA: Inferred from Direct Assay |
C |
From SGD |
|||
| GO:0005737 |
cytoplasm |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0963 |
C |
From SGD |
||
| GO:0005737 |
cytoplasm |
SGD_REF:S000148671 |
IEA: Inferred from Electronic Annotation |
UniProtKB-SubCell:SL-0086 |
C |
From SGD |
||
| GO:0005849 |
mRNA cleavage factor complex |
SGD_REF:S000060315 |
IPI: Inferred from Physical Interaction |
C |
From SGD |
|||
| GO:0006378 |
mRNA polyadenylation |
SGD_REF:S000052680 |
IMP: Inferred from Mutant Phenotype |
P |
From SGD |
|||
| GO:0006378 |
mRNA polyadenylation |
SGD_REF:S000060315 |
IDA: Inferred from Direct Assay |
P |
From SGD |
|||
| GO:0006379 |
mRNA cleavage |
SGD_REF:S000060315 |
IDA: Inferred from Direct Assay |
P |
From SGD |
|||
| GO:0006397 |
mRNA processing |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0507 |
P |
From SGD |
||
| GO:0010494 |
cytoplasmic stress granule |
SGD_REF:S000128263 |
IDA: Inferred from Direct Assay |
C |
From SGD |
| ||
| edit table |
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 Kessler MM et al. (1997) Hrp1, a sequence-specific RNA-binding protein that shuttles between the nucleus and the cytoplasm, is required for mRNA 3'-end formation in yeast. Genes Dev 11: 2545-56 PubMed GONUTS page
- ↑ Kim Guisbert K et al. (2005) Functional specificity of shuttling hnRNPs revealed by genome-wide analysis of their RNA binding profiles. RNA 11: 383-93 PubMed GONUTS page
- ↑ Bucheli ME et al. (2007) Polyadenylation site choice in yeast is affected by competition between Npl3 and polyadenylation factor CFI. RNA 13: 1756-64 PubMed GONUTS page
- ↑ Kumar A et al. (2002) Subcellular localization of the yeast proteome. Genes Dev 16: 707-19 PubMed GONUTS page
- ↑ Xu C & Henry MF (2004) Nuclear export of hnRNP Hrp1p and nuclear export of hnRNP Npl3p are linked and influenced by the methylation state of Npl3p. Mol Cell Biol 24: 10742-56 PubMed GONUTS page
- ↑ 6.0 6.1 6.2 Gross S & Moore C (2001) Five subunits are required for reconstitution of the cleavage and polyadenylation activities of Saccharomyces cerevisiae cleavage factor I. Proc Natl Acad Sci U S A 98: 6080-5 PubMed GONUTS page
- ↑ Buchan JR et al. (2008) P bodies promote stress granule assembly in Saccharomyces cerevisiae. J Cell Biol 183: 441-55 PubMed GONUTS page
