Ambox notice.png

GONUTS is under stress! The website is currently experiencing long-wait times and frequent time-outs due to the record number of students, groups, and annotations related to CACAO this semester. We are currently working on increasing performance -- please accept our apologies for the technical difficulties.

You can help reduce stress on the server by:

  1. not reloading pages frequently - this just adds
  2. opening links in new windows (so you can read the old page)

SGD:FUN30

From GONUTS
Jump to: navigation, search

Contents

Species (Taxon ID) Saccharomyces cerevisiae (baker's yeast) (taxon:4932)
Gene Name(s) FUN30 ( synonyms: YAL019W )
Protein Name(s) ATPase of the Snf2p family with chromatin remodeling activity,
External Links
SGD S000000017

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0000166

nucleotide binding

SGD_REF:S000148669

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0547

F

From SGD

GO:0000183

chromatin silencing at rDNA

SGD_REF:S000132432
PMID:19956593[1]

IMP: Inferred from Mutant Phenotype

P

From SGD

GO:0003676

nucleic acid binding

SGD_REF:S000124036

IEA: Inferred from Electronic Annotation

InterPro:IPR001650

F

From SGD

GO:0003677

DNA binding

SGD_REF:S000124036

IEA: Inferred from Electronic Annotation

InterPro:IPR000330

F

From SGD

GO:0003677

DNA binding

SGD_REF:S000132810
PMID:20075079[2]

IDA: Inferred from Direct Assay

F

From SGD

GO:0003677

DNA binding

SGD_REF:S000148669

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0238

F

From SGD

GO:0003682

chromatin binding

SGD_REF:S000132810
PMID:20075079[2]

IDA: Inferred from Direct Assay

F

From SGD

GO:0004386

helicase activity

SGD_REF:S000124036

IEA: Inferred from Electronic Annotation

InterPro:IPR001650

F

From SGD

GO:0004386

helicase activity

SGD_REF:S000148669

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0347

F

From SGD

GO:0005524

ATP binding

SGD_REF:S000124036

IEA: Inferred from Electronic Annotation

InterPro:IPR000330
InterPro:IPR001650

F

From SGD

GO:0005524

ATP binding

SGD_REF:S000148669

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0067

F

From SGD

GO:0005634

nucleus

SGD_REF:S000074185
PMID:14562095[3]

IDA: Inferred from Direct Assay

C

From SGD

GO:0005634

nucleus

SGD_REF:S000148669

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0539

C

From SGD

GO:0005634

nucleus

SGD_REF:S000148671

IEA: Inferred from Electronic Annotation

UniProtKB-SubCell:SL-0191

C

From SGD

GO:0005739

mitochondrion

SGD_REF:S000075100
PMID:14576278[4]

IDA: Inferred from Direct Assay

C

From SGD

GO:0005739

mitochondrion

SGD_REF:S000117178
PMID:16823961[5]

IDA: Inferred from Direct Assay

C

From SGD

GO:0006348

chromatin silencing at telomere

SGD_REF:S000132432
PMID:19956593[1]

IMP: Inferred from Mutant Phenotype

P

From SGD

GO:0008094

DNA-dependent ATPase activity

SGD_REF:S000132810
PMID:20075079[2]

IDA: Inferred from Direct Assay

F

From SGD

GO:0016787

hydrolase activity

SGD_REF:S000148669

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0378

F

From SGD

GO:0030466

chromatin silencing at silent mating-type cassette

SGD_REF:S000132432
PMID:19956593[1]

IMP: Inferred from Mutant Phenotype

P

From SGD

GO:0030466

chromatin silencing at silent mating-type cassette

SGD_REF:S000132432
PMID:19956593[1]

IPI: Inferred from Physical Interaction

P

From SGD

GO:0031934

mating-type region heterochromatin

SGD_REF:S000132432
PMID:19956593[1]

IPI: Inferred from Physical Interaction

C

From SGD

GO:0042803

protein homodimerization activity

SGD_REF:S000132810
PMID:20075079[2]

IDA: Inferred from Direct Assay

F

From SGD

GO:0051276

chromosome organization

SGD_REF:S000052609
PMID:10454593[6]

IGI: Inferred from Genetic Interaction

P

From SGD

GO:0070869

heterochromatin assembly involved in chromatin silencing

SGD_REF:S000144601
PMID:21388962[7]

IMP: Inferred from Mutant Phenotype

P

From SGD

GO:0070870

heterochromatin maintenance involved in chromatin silencing

SGD_REF:S000144601
PMID:21388962[7]

IGI: Inferred from Genetic Interaction

SGD:S000000449

P

From SGD

GO:0070870

heterochromatin maintenance involved in chromatin silencing

SGD_REF:S000144601
PMID:21388962[7]

IMP: Inferred from Mutant Phenotype

P

From SGD


Notes

References

See Help:References for how to manage references in GONUTS.
  1. 1.0 1.1 1.2 1.3 1.4 Neves-Costa A et al. (2009) The SNF2-family member Fun30 promotes gene silencing in heterochromatic loci. PLoS One 4: e8111 PubMed GONUTS page
  2. 2.0 2.1 2.2 2.3 Awad S et al. (2010) The Snf2 homolog Fun30 acts as a homodimeric ATP-dependent chromatin-remodeling enzyme. J Biol Chem 285: 9477-84 PubMed GONUTS page
  3. Huh WK et al. (2003) Global analysis of protein localization in budding yeast. Nature 425: 686-91 PubMed GONUTS page
  4. Sickmann A et al. (2003) The proteome of Saccharomyces cerevisiae mitochondria. Proc Natl Acad Sci U S A 100: 13207-12 PubMed GONUTS page
  5. Reinders J et al. (2006) Toward the complete yeast mitochondrial proteome: multidimensional separation techniques for mitochondrial proteomics. J Proteome Res 5: 1543-54 PubMed GONUTS page
  6. Ouspenski II et al. (1999) New yeast genes important for chromosome integrity and segregation identified by dosage effects on genome stability. Nucleic Acids Res 27: 3001-8 PubMed GONUTS page
  7. 7.0 7.1 7.2 Yu Q et al. (2011) Roles of chromatin remodeling factors in the formation and maintenance of heterochromatin structure. J Biol Chem 286: 14659-69 PubMed GONUTS page
Personal tools
Namespaces
Variants
Actions
Navigation
Cacao
Journal Clubs
page contributors
Toolbox