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SGD:CDC39
Contents |
| Species (Taxon ID) | Saccharomyces cerevisiae (baker's yeast) (taxon:4932) | |
| Gene Name(s) | CDC39 ( synonyms: YCR093W, NOT1, ROS1, SMD6 ) | |
| Protein Name(s) | Component of the CCR4-NOT transcriptional complex, | |
| External Links | ||
| SGD | S000000689 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0000122 |
negative regulation of transcription from RNA polymerase II promoter |
SGD_REF:S000054264 |
TAS: Traceable Author Statement |
P |
From SGD |
|||
| GO:0000288 |
nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay |
SGD_REF:S000069437 |
IDA: Inferred from Direct Assay |
P |
From SGD |
|||
| GO:0000288 |
nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay |
SGD_REF:S000069437 |
IGI: Inferred from Genetic Interaction |
P |
From SGD |
|||
| GO:0000288 |
nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay |
SGD_REF:S000069437 |
IMP: Inferred from Mutant Phenotype |
P |
From SGD |
|||
| GO:0000289 |
nuclear-transcribed mRNA poly(A) tail shortening |
SGD_REF:S000069437 |
IDA: Inferred from Direct Assay |
P |
From SGD |
|||
| GO:0000749 |
response to pheromone involved in conjugation with cellular fusion |
SGD_REF:S000040388 |
IMP: Inferred from Mutant Phenotype |
P |
From SGD |
|||
| GO:0003674 |
molecular function |
SGD_REF:S000069584 |
ND: No biological Data available |
F |
From SGD |
|||
| GO:0005634 |
nucleus |
SGD_REF:S000054264 |
IDA: Inferred from Direct Assay |
C |
From SGD |
|||
| GO:0005634 |
nucleus |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0539 |
C |
From SGD |
||
| GO:0005634 |
nucleus |
SGD_REF:S000148671 |
IEA: Inferred from Electronic Annotation |
UniProtKB-SubCell:SL-0191 |
C |
From SGD |
||
| GO:0005737 |
cytoplasm |
SGD_REF:S000069437 |
IDA: Inferred from Direct Assay |
C |
From SGD |
|||
| GO:0005737 |
cytoplasm |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0963 |
C |
From SGD |
||
| GO:0005737 |
cytoplasm |
SGD_REF:S000148671 |
IEA: Inferred from Electronic Annotation |
UniProtKB-SubCell:SL-0086 |
C |
From SGD |
||
| GO:0006351 |
transcription, DNA-dependent |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0804 |
P |
From SGD |
||
| GO:0006355 |
regulation of transcription, DNA-dependent |
SGD_REF:S000148669 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0805 |
P |
From SGD |
||
| GO:0006357 |
regulation of transcription from RNA polymerase II promoter |
SGD_REF:S000042122 |
IPI: Inferred from Physical Interaction |
P |
From SGD |
|||
| GO:0006368 |
transcription elongation from RNA polymerase II promoter |
SGD_REF:S000074806 |
IGI: Inferred from Genetic Interaction |
SGD:S000004470 |
P |
From SGD |
||
| GO:0006368 |
transcription elongation from RNA polymerase II promoter |
SGD_REF:S000074806 |
IMP: Inferred from Mutant Phenotype |
P |
From SGD |
|||
| GO:0007124 |
pseudohyphal growth |
SGD_REF:S000042772 |
IMP: Inferred from Mutant Phenotype |
P |
From SGD |
|||
| GO:0030015 |
CCR4-NOT core complex |
SGD_REF:S000042122 |
IPI: Inferred from Physical Interaction |
C |
From SGD |
|||
| GO:0032968 |
positive regulation of transcription elongation from RNA polymerase II promoter |
SGD_REF:S000145305 |
IDA: Inferred from Direct Assay |
P |
From SGD |
|||
| GO:0032968 |
positive regulation of transcription elongation from RNA polymerase II promoter |
SGD_REF:S000145305 |
IPI: Inferred from Physical Interaction |
SGD:S000002299 |
P |
From SGD |
||
| GO:0051726 |
regulation of cell cycle |
SGD_REF:S000041086 |
IMP: Inferred from Mutant Phenotype |
P |
From SGD |
| ||
| edit table |
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Collart MA & Struhl K (1994) NOT1(CDC39), NOT2(CDC36), NOT3, and NOT4 encode a global-negative regulator of transcription that differentially affects TATA-element utilization. Genes Dev 8: 525-37 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 2.4 Tucker M et al. (2002) Ccr4p is the catalytic subunit of a Ccr4p/Pop2p/Notp mRNA deadenylase complex in Saccharomyces cerevisiae. EMBO J 21: 1427-36 PubMed GONUTS page
- ↑ Neiman AM et al. (1990) CDC36 and CDC39 are negative elements in the signal transduction pathway of yeast. Cell Regul 1: 391-401 PubMed GONUTS page
- ↑ 4.0 4.1 Bai Y et al. (1999) The CCR4 and CAF1 proteins of the CCR4-NOT complex are physically and functionally separated from NOT2, NOT4, and NOT5. Mol Cell Biol 19: 6642-51 PubMed GONUTS page
- ↑ 5.0 5.1 Denis CL et al. (2001) Genetic evidence supports a role for the yeast CCR4-NOT complex in transcriptional elongation. Genetics 158: 627-34 PubMed GONUTS page
- ↑ Mösch HU & Fink GR (1997) Dissection of filamentous growth by transposon mutagenesis in Saccharomyces cerevisiae. Genetics 145: 671-84 PubMed GONUTS page
- ↑ 7.0 7.1 Kruk JA et al. (2011) The multifunctional Ccr4-Not complex directly promotes transcription elongation. Genes Dev 25: 581-93 PubMed GONUTS page
- ↑ Shuster EO & Byers B (1989) Pachytene arrest and other meiotic effects of the start mutations in Saccharomyces cerevisiae. Genetics 123: 29-43 PubMed GONUTS page
