SCHPO:MSH3

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Species (Taxon ID)	Schizosaccharomyces pombe (Fission yeast). (taxon:4896)
Gene Name(s)	msh3 ( synonyms: swi4 )
Protein Name(s)	DNA mismatch repair protein msh3 MutS protein homolog 3 Mating-type switching protein swi4
External Links
UniProt Identifier	MSH3_SCHPO
UniProt Accessions	P26359,
EMBL	X61306, CU329670,
PIR	S22569,
RefSeq	NP_593952.1,
Pfam	PF01624, PF05188, PF05192, PF05190, PF00488,

Annotations

Qualifier	GO ID	GO term name	Reference(s)	Evidence Code	with/from	Aspect	Notes
	GO:0000166	nucleotide binding	GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0547	F
	GO:0003677	DNA binding	GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0238	F
	GO:0005524	ATP binding	GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR000432	F
	GO:0005524	ATP binding	GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR007695	F
	GO:0005524	ATP binding	GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR007696	F
	GO:0005524	ATP binding	GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR007860	F
	GO:0005524	ATP binding	GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR007861	F
	GO:0005524	ATP binding	GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR016151	F
	GO:0005524	ATP binding	GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0067	F
	GO:0005634	nucleus	GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0539	C
	GO:0005634	nucleus	GO_REF:0000023	IEA: Inferred from Electronic Annotation	SP_SL:SL-0191	C
	GO:0005634	nucleus	PMID:16823372^[1]	IDA: Inferred from Direct Assay		C
	GO:0006281	DNA repair	GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0234	P
	GO:0006298	mismatch repair	GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR000432	P
	GO:0006298	mismatch repair	GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR007695	P
	GO:0006298	mismatch repair	GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR007696	P
	GO:0006298	mismatch repair	GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR007860	P
	GO:0006298	mismatch repair	GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR007861	P
	GO:0006298	mismatch repair	GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR016151	P
	GO:0006974	response to DNA damage stimulus	GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0227	P
	GO:0007131	reciprocal meiotic recombination	PMID:11333218^[2]	IMP: Inferred from Mutant Phenotype		P
	GO:0007534	gene conversion at mating-type locus	PMID:6587363^[3]	IMP: Inferred from Mutant Phenotype		P
	GO:0030983	mismatched DNA binding	GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR000432	F
	GO:0030983	mismatched DNA binding	GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR007695	F
	GO:0030983	mismatched DNA binding	GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR007696	F
	GO:0030983	mismatched DNA binding	GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR007860	F
	GO:0030983	mismatched DNA binding	GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR007861	F
	GO:0030983	mismatched DNA binding	GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR016151	F
	GO:0043570	maintenance of DNA repeat elements	PMID:11333219^[4]	IMP: Inferred from Mutant Phenotype		P
NOT	GO:0006298	mismatch repair	PMID:11333218^[2]	TAS: Traceable Author Statement		P
	GO:0000794	condensed nuclear chromosome	PMID:17208035^[5]	ISS: Inferred from Sequence or Structural Similarity	PTHR11361:AN26	C	Seeded From PANTHER
	GO:0003006	reproductive developmental process	PMID:17208035^[5]	ISS: Inferred from Sequence or Structural Similarity	PTHR11361:AN26	P	Seeded From PANTHER
	GO:0003684	damaged DNA binding	PMID:17208035^[5]	ISS: Inferred from Sequence or Structural Similarity	PTHR11361:AN26	F	Seeded From PANTHER
	GO:0006298	mismatch repair	PMID:17208035^[5]	ISS: Inferred from Sequence or Structural Similarity	PTHR11361:AN292	P	Seeded From PANTHER
	GO:0006298	mismatch repair	PMID:17208035^[5]	ISS: Inferred from Sequence or Structural Similarity	PTHR11361:AN24	P	Seeded From PANTHER
	GO:0006310	DNA recombination	PMID:17208035^[5]	ISS: Inferred from Sequence or Structural Similarity	PTHR11361:AN292	P	Seeded From PANTHER
	GO:0007126	meiosis	PMID:17208035^[5]	ISS: Inferred from Sequence or Structural Similarity	PTHR11361:AN279	P	Seeded From PANTHER
	GO:0007126	meiosis	PMID:17208035^[5]	ISS: Inferred from Sequence or Structural Similarity	PTHR11361:AN26	P	Seeded From PANTHER
	GO:0016887	ATPase activity	PMID:17208035^[5]	ISS: Inferred from Sequence or Structural Similarity	PTHR11361:AN24	F	Seeded From PANTHER
	GO:0030983	mismatched DNA binding	PMID:17208035^[5]	ISS: Inferred from Sequence or Structural Similarity	PTHR11361:AN278	F	Seeded From PANTHER
	GO:0030983	mismatched DNA binding	PMID:17208035^[5]	ISS: Inferred from Sequence or Structural Similarity	PTHR11361:AN24	F	Seeded From PANTHER
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Notes

References

See Help:References for how to manage references in GONUTS.

↑ Matsuyama A et al. (2006) ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Nat Biotechnol 24: 841-7 PubMed GONUTS page
↑ ^2.0 ^2.1 Tornier C et al. (2001) Requirement for Msh6, but not for Swi4 (Msh3), in Msh2-dependent repair of base-base mismatches and mononucleotide loops in Schizosaccharomyces pombe. Genetics 158: 65-75 PubMed GONUTS page
↑ Egel R et al. (1984) Genes required for initiation and resolution steps of mating-type switching in fission yeast. Proc Natl Acad Sci U S A 81: 3481-5 PubMed GONUTS page
↑ Mansour AA et al. (2001) Control of GT repeat stability in Schizosaccharomyces pombe by mismatch repair factors. Genetics 158: 77-85 PubMed GONUTS page
↑ ^5.00 ^5.01 ^5.02 ^5.03 ^5.04 ^5.05 ^5.06 ^5.07 ^5.08 ^5.09 ^5.10 Thomas PD et al. (2007) Ontology annotation: mapping genomic regions to biological function. Curr Opin Chem Biol 11: 4-11 PubMed GONUTS page

[PMID:16823372-0] Matsuyama A et al. (2006) ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Nat Biotechnol 24: 841-7 PubMed GONUTS page

[PMID:11333218-1] 2.0 ^2.1 Tornier C et al. (2001) Requirement for Msh6, but not for Swi4 (Msh3), in Msh2-dependent repair of base-base mismatches and mononucleotide loops in Schizosaccharomyces pombe. Genetics 158: 65-75 PubMed GONUTS page

[PMID:6587363-2] Egel R et al. (1984) Genes required for initiation and resolution steps of mating-type switching in fission yeast. Proc Natl Acad Sci U S A 81: 3481-5 PubMed GONUTS page

[PMID:11333219-3] Mansour AA et al. (2001) Control of GT repeat stability in Schizosaccharomyces pombe by mismatch repair factors. Genetics 158: 77-85 PubMed GONUTS page

[PMID:17208035-4] 5.00 ^5.01 ^5.02 ^5.03 ^5.04 ^5.05 ^5.06 ^5.07 ^5.08 ^5.09 ^5.10 Thomas PD et al. (2007) Ontology annotation: mapping genomic regions to biological function. Curr Opin Chem Biol 11: 4-11 PubMed GONUTS page

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SCHPO:MSH3

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