RefGenome Electronic Jamboree 2009-02 LONP2
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Contents |
Orthoset
Participants
| Name | Group | Organism(s)/Genome(s) | Notes |
|---|---|---|---|
|
Stan Laulederkind |
RGD |
Rat | |
|
Rachael Huntley |
GOA |
Human |
LONP2 (Q86WA8) |
|
Donghui Li |
TAIR |
A. thaliana |
Lon2/At5g47040, no experimental annotation |
|
Susan Tweedie |
flyBase |
D. melanogaster |
No fly ortholog for LONP2. |
|
Lakshmi Pillai |
AgBase |
G. gallus |
No papers |
|
Li Ni |
MGI |
Mouse |
Lonp2=MGI:1914137=Q9DBN5 |
|
Kimberly Van Auken |
WormBase |
C. elegans |
WBGene00013541 (Y75B8A.4) - no experimental annotations |
| edit table |
LONP2
| Category | ID | Term | Human | Mouse | Rat | Chicken | Zfish | Fly | Worm | Dicty | Dicot | Yeast | Pombe | Ecoli |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Biological Process | GO:0014070 | response to organic cyclic substance | X | X | IEP | X | X | X | X | X | X | X | X | X |
| Biological Process | GO:0016485 | protein processing | IMP | X | X | X | X | X | X | X | X | X | X | X |
| Cellular Component | GO:0005782 | peroxisomal matrix | X | X | IDA | X | X | X | X | X | X | X | X | X |
| Cellular Component | GO:0005777 | peroxisome | IDA | X | X | X | X | X | X | X | X | X | X | X |
| Cellular Component | GO:0005737 | cytoplasm | X | IDA | X | X | X | X | X | X | X | X | X | X |
| Cellular Component | GO:0005634 | nucleus | X | IDA | X | X | X | X | X | X | X | X | X | X |
| Molecular Function | GO:0008233 | peptidase activity | IDA | X | X | X | X | X | X | X | X | X | X | X |
| Molecular Function | GO:0005515 | protein binding | IPI | IPI | X | X | X | X | X | X | X | X | X | X |
| Molecular Function | GO:0019899 | enzyme binding | IPI | X | X | X | X | X | X | X | X | X | X | X |
| Group | Organism | gene | Qualifier | GO ID | GO term name | Reference(s) | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|---|
|
RGD |
Rat |
Lonp2 | GO:0014070 |
response to organic cyclic substance |
IEP: Inferred from Expression Pattern |
P |
complete | ||||
|
RGD |
Rat |
Lonp2 | GO:0005782 |
peroxisomal matrix |
IDA: Inferred from Direct Assay |
C |
complete | ||||
|
GOA |
Human |
LONP2 | GO:0016485 |
protein processing |
IMP: Inferred from Mutant Phenotype |
P |
complete | ||||
|
GOA |
Human |
LONP2 | GO:0008233 |
peptidase activity |
IDA: Inferred from Direct Assay |
F |
complete | ||||
|
GOA |
Human |
LONP2 | GO:0005515 |
protein binding |
IPI: Inferred from Physical Interaction |
Q15067 |
F |
complete | |||
|
GOA |
Human |
LONP2 | GO:0019899 |
enzyme binding |
IPI: Inferred from Physical Interaction |
P09110 |
F |
complete | |||
|
GOA |
Human |
LONP2 | GO:0005777 |
peroxisome |
IDA: Inferred from Direct Assay |
C |
complete | ||||
|
GOA |
Human |
LONP2 | GO:0005777 |
peroxisome |
IDA: Inferred from Direct Assay |
C |
complete | ||||
|
MGI |
Mouse |
Lonp2 | GO:0005737 |
cytoplasm |
IDA: Inferred from Direct Assay |
C |
complete | ||||
|
MGI |
Mouse |
Lonp2 | GO:0005634 |
nucleus |
IDA: Inferred from Direct Assay |
C |
complete | ||||
|
MGI |
Mouse |
Lonp2 | GO:0005515 |
protein binding |
IPI: Inferred from Physical Interaction |
UniprotKB:Q61658 |
F |
complete | |||
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Notes
Minutes
No issues were raised.
References
See Help:References for how to manage references in GONUTS.
- ↑ Yokota S et al. (2008) Induction of peroxisomal Lon protease in rat liver after di-(2-ethylhexyl)phthalate treatment. Histochem Cell Biol 129: 73-83 PubMed GONUTS page
- ↑ 2.0 2.1 Kikuchi M et al. (2004) Proteomic analysis of rat liver peroxisome: presence of peroxisome-specific isozyme of Lon protease. J Biol Chem 279: 421-8 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 3.3 3.4 Omi S et al. (2008) Contribution of peroxisome-specific isoform of Lon protease in sorting PTS1 proteins to peroxisomes. J Biochem 143: 649-60 PubMed GONUTS page
- ↑ 4.0 4.1 4.2 Sajedi E et al. (2008) DNMT1 interacts with the developmental transcriptional repressor HESX1. Biochim Biophys Acta 1783: 131-43 PubMed GONUTS page
