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ROSDO:PCKA
Contents |
| Species (Taxon ID) | sp. (strain OCh 114)) (Roseobacter denitrificans). ([1]) | |
| Gene Name(s) | pckA | |
| Protein Name(s) | Phosphoenolpyruvate carboxykinase [ATP]
PEP carboxykinase PEPCK Phosphoenolpyruvate carboxylase | |
| External Links | ||
| EMBL | CP000362 | |
| RefSeq | YP_681703.1 | |
| ProteinModelPortal | Q16AH6 | |
| STRING | Q16AH6 | |
| GeneID | 4197310 | |
| GenomeReviews | CP000362_GR | |
| KEGG | rde:RD1_1376 | |
| NMPDR | fig|375451.6.peg.1289 | |
| eggNOG | COG1866 | |
| HOGENOM | HBG293387 | |
| OMA | FAQDLYG | |
| PhylomeDB | Q16AH6 | |
| ProtClustDB | PRK09344 | |
| BioCyc | RDEN375451:RD1_1376-MONOMER | |
| GO | GO:0005737 GO:0005524 GO:0004612 GO:0006094 | |
| HAMAP | MF_00453 | |
| InterPro | IPR001272 IPR013035 IPR008210 | |
| Gene3D | G3DSA:3.90.228.20 G3DSA:3.40.449.10 | |
| Pfam | PF01293 | |
| PIRSF | PIRSF006294 | |
| SUPFAM | SSF68923 | |
| TIGRFAMs | TIGR00224 | |
| PROSITE | PS00532 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0000166 |
nucleotide binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0004611 |
phosphoenolpyruvate carboxykinase activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0004611 |
phosphoenolpyruvate carboxykinase activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0004612 |
phosphoenolpyruvate carboxykinase (ATP) activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0004612 |
phosphoenolpyruvate carboxykinase (ATP) activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0005524 |
ATP binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0005524 |
ATP binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0005737 |
cytoplasm |
IEA: Inferred from Electronic Annotation |
C |
Seeded From UniProt |
||||
| GO:0005737 |
cytoplasm |
IEA: Inferred from Electronic Annotation |
SP_SL:SL-0086 |
C |
Seeded From UniProt |
|||
| GO:0006094 |
gluconeogenesis |
IEA: Inferred from Electronic Annotation |
P |
Seeded From UniProt |
||||
| GO:0006094 |
gluconeogenesis |
IEA: Inferred from Electronic Annotation |
P |
Seeded From UniProt |
||||
| GO:0006094 |
gluconeogenesis |
IEA: Inferred from Electronic Annotation |
P |
Seeded From UniProt |
||||
| GO:0006094 |
gluconeogenesis |
IEA: Inferred from Electronic Annotation |
P |
Seeded From UniProt |
||||
| GO:0016829 |
lyase activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0016831 |
carboxy-lyase activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0017076 |
purine nucleotide binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0017076 |
purine nucleotide binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0004611 |
phosphoenolpyruvate carboxykinase activity |
IEP: Inferred from Expression Pattern |
F |
Four anaplerotic enzymes are known to assimilate CO2 and replenish the intermediates of the TCA cycle, and genes encoding these anaplerotic enzymes can be all found in the genome of R. denitrificans OCh114; malic enzyme (tme, RD1_0421, EC 1.1.1.40, pyruvatemalate), PEP carboxykinase (pckA, RD1_1376, EC 4.1.1.49, PEPOAA).... In the conditions we tested, the transcript level is higher for pckA (RD1_1376) and tme (RD1_0421) than for pyc (RD1_3376) and ppc (RD1_4248) (Figure 3). |
complete | |||
| edit table |
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Tang KH et al. (2009) Carbohydrate metabolism and carbon fixation in Roseobacter denitrificans OCh114. PLoS One 4: e7233 PubMed GONUTS page
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