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MOUSE:VIME

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Contents

Species (Taxon ID) Mus musculus (Mouse). ([1])
Gene Name(s) Vim
Protein Name(s) Vimentin
External Links
EMBL M24849
X56397
M26251
Z22526
X51438
Y07738
AK033175
D50805
IPI IPI00227299
PIR A43803
RefSeq NP_035831.2
UniGene Mm.268000
ProteinModelPortal P20152
SMR P20152
DIP DIP-188N
IntAct P20152
MINT MINT-1202726
STRING P20152
PhosphoSite P20152
SWISS-2DPAGE P20152
REPRODUCTION-2DPAGE IPI00227299
UCD-2DPAGE P20152
PRIDE P20152
Ensembl ENSMUST00000028062
GeneID 22352
KEGG mmu:22352
CTD 7431
MGI MGI:98932
HOGENOM HBG715391
HOVERGEN HBG013015
InParanoid P20152
OMA ANRTNEK
OrthoDB EOG4GHZPD
PhylomeDB P20152
NextBio 302643
ArrayExpress P20152
Bgee P20152
CleanEx MM_VIM
Genevestigator P20152
GermOnline ENSMUSG00000026728
GO GO:0031252
GO:0045098
GO:0005212
GO:0014002
GO:0060020
GO:0045109
GO:0070307
GO:0010977
InterPro IPR016044
IPR001664
IPR006821
IPR018039
KO K07606
PANTHER PTHR23239
Pfam PF00038
PF04732
PROSITE PS00226

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0005198

structural molecule activity

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR001664

F

Seeded From UniProt

GO:0005198

structural molecule activity

PMID:12177195[1]

IMP: Inferred from Mutant Phenotype

MGI:MGI:1931877

F

Seeded From UniProt

GO:0005200

structural constituent of cytoskeleton

GO_REF:0000019

IEA: Inferred from Electronic Annotation

Ensembl:ENSP00000446007

F

Seeded From UniProt

GO:0005212

structural constituent of eye lens

PMID:15037121[2]

IDA: Inferred from Direct Assay

F

Seeded From UniProt

GO:0005515

protein binding

PMID:11895474[3]

IPI: Inferred from Physical Interaction

UniProtKB:P35465

F

Seeded From UniProt

GO:0005515

protein binding

PMID:12244133[4]

IPI: Inferred from Physical Interaction

UniProtKB:Q9R269

F

Seeded From UniProt

GO:0005515

protein binding

PMID:17356066[5]

IPI: Inferred from Physical Interaction

UniProtKB:Q70IV5

F

Seeded From UniProt

GO:0005515

protein binding

PMID:19029034[6]

IPI: Inferred from Physical Interaction

UniProtKB:Q9R269

F

Seeded From UniProt

GO:0005737

cytoplasm

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0963

C

Seeded From UniProt

GO:0005737

cytoplasm

GO_REF:0000019

IEA: Inferred from Electronic Annotation

Ensembl:ENSP00000446007

C

Seeded From UniProt

GO:0005737

cytoplasm

GO_REF:0000023

IEA: Inferred from Electronic Annotation

SP_SL:SL-0086

C

Seeded From UniProt

GO:0005737

cytoplasm

PMID:15965470[7]

IDA: Inferred from Direct Assay

C

Seeded From UniProt

GO:0005829

cytosol

GO_REF:0000019

IEA: Inferred from Electronic Annotation

Ensembl:ENSP00000446007

C

Seeded From UniProt

GO:0005856

cytoskeleton

GO_REF:0000019

IEA: Inferred from Electronic Annotation

Ensembl:ENSP00000446007

C

Seeded From UniProt

GO:0005882

intermediate filament

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR006821

C

Seeded From UniProt

GO:0005882

intermediate filament

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0403

C

Seeded From UniProt

GO:0005882

intermediate filament

GO_REF:0000019

IEA: Inferred from Electronic Annotation

Ensembl:ENSP00000446007

C

Seeded From UniProt

GO:0005882

intermediate filament

PMID:11487638[8]

IDA: Inferred from Direct Assay

C

Seeded From UniProt

GO:0005882

intermediate filament

PMID:15037121[2]

IDA: Inferred from Direct Assay

C

Seeded From UniProt

GO:0005882

intermediate filament

PMID:17882221[9]

IDA: Inferred from Direct Assay

C

Seeded From UniProt

GO:0005882

intermediate filament

PMID:2493000[10]

IDA: Inferred from Direct Assay

C

Seeded From UniProt

GO:0005882

intermediate filament

PMID:8188282[11]

IDA: Inferred from Direct Assay

C

Seeded From UniProt

GO:0005886

plasma membrane

GO_REF:0000019

IEA: Inferred from Electronic Annotation

Ensembl:ENSP00000446007

C

Seeded From UniProt

GO:0008022

protein C-terminus binding

GO_REF:0000019

IEA: Inferred from Electronic Annotation

Ensembl:ENSP00000446007

F

Seeded From UniProt

GO:0010977

negative regulation of neuron projection development

PMID:11487638[8]

IGI: Inferred from Genetic Interaction

MGI:MGI:95697

P

Seeded From UniProt

GO:0014002

astrocyte development

PMID:11487638[8]

IGI: Inferred from Genetic Interaction

MGI:MGI:95697

P

Seeded From UniProt

GO:0019901

protein kinase binding

GO_REF:0000019

IEA: Inferred from Electronic Annotation

Ensembl:ENSRNOP00000024430

F

Seeded From UniProt

GO:0030424

axon

GO_REF:0000019

IEA: Inferred from Electronic Annotation

Ensembl:ENSRNOP00000024430

C

Seeded From UniProt

GO:0031252

cell leading edge

PMID:15958512[12]

IDA: Inferred from Direct Assay

C

Seeded From UniProt

GO:0042995

cell projection

PMID:10989258[13]

IDA: Inferred from Direct Assay

C

Seeded From UniProt

GO:0045098

type III intermediate filament

PMID:12177195[1]

TAS: Traceable Author Statement

C

Seeded From UniProt

GO:0045103

intermediate filament-based process

PMID:12177195[1]

IMP: Inferred from Mutant Phenotype

MGI:MGI:1931877

P

Seeded From UniProt

GO:0045109

intermediate filament organization

PMID:11487638[8]

IGI: Inferred from Genetic Interaction

MGI:MGI:95697

P

Seeded From UniProt

GO:0045111

intermediate filament cytoskeleton

GO_REF:0000019

IEA: Inferred from Electronic Annotation

Ensembl:ENSP00000446007

C

Seeded From UniProt

GO:0060020

Bergmann glial cell differentiation

PMID:10816608[14]

IMP: Inferred from Mutant Phenotype

MGI:MGI:1931877

P

Seeded From UniProt

GO:0070307

lens fiber cell development

PMID:15037121[2]

IDA: Inferred from Direct Assay

P

Seeded From UniProt


edit table

Notes

References

See Help:References for how to manage references in GONUTS.

  1. ↑ 1.0 1.1 1.2 Takemura M et al. (2002) Protective role of phosphorylation in turnover of glial fibrillary acidic protein in mice. J Neurosci 22: 6972-9 PubMed GONUTS page
  2. ↑ 2.0 2.1 2.2 Sandilands A et al. (2004) Bfsp2 mutation found in mouse 129 strains causes the loss of CP49' and induces vimentin-dependent changes in the lens fibre cell cytoskeleton. Exp Eye Res 78: 875-89 PubMed GONUTS page
  3. ↑ Goto H et al. (2002) Phosphorylation and reorganization of vimentin by p21-activated kinase (PAK). Genes Cells 7: 91-7 PubMed GONUTS page
  4. ↑ van den Heuvel AP et al. (2002) Binding of protein kinase B to the plakin family member periplakin. J Cell Sci 115: 3957-66 PubMed GONUTS page
  5. ↑ Jing R et al. (2007) Synemin is expressed in reactive astrocytes in neurotrauma and interacts differentially with vimentin and GFAP intermediate filament networks. J Cell Sci 120: 1267-77 PubMed GONUTS page
  6. ↑ Yoon KH & FitzGerald PG (2009) Periplakin interactions with lens intermediate and beaded filaments. Invest Ophthalmol Vis Sci 50: 1283-9 PubMed GONUTS page
  7. ↑ Eiraku M et al. (2005) DNER acts as a neuron-specific Notch ligand during Bergmann glial development. Nat Neurosci 8: 873-80 PubMed GONUTS page
  8. ↑ 8.0 8.1 8.2 8.3 Menet V et al. (2001) Inactivation of the glial fibrillary acidic protein gene, but not that of vimentin, improves neuronal survival and neurite growth by modifying adhesion molecule expression. J Neurosci 21: 6147-58 PubMed GONUTS page
  9. ↑ Seandel M et al. (2007) Generation of functional multipotent adult stem cells from GPR125+ germline progenitors. Nature 449: 346-50 PubMed GONUTS page
  10. ↑ Monteiro MJ & Cleveland DW (1989) Expression of NF-L and NF-M in fibroblasts reveals coassembly of neurofilament and vimentin subunits. J Cell Biol 108: 579-93 PubMed GONUTS page
  11. ↑ Engle LJ & Kennett RH (1994) Cloning, analysis, and chromosomal localization of myoxin (MYH12), the human homologue to the mouse dilute gene. Genomics 19: 407-16 PubMed GONUTS page
  12. ↑ Tao H et al. (2005) A dual role of FGF10 in proliferation and coordinated migration of epithelial leading edge cells during mouse eyelid development. Development 132: 3217-30 PubMed GONUTS page
  13. ↑ Ha BK & King JS (2000) Localization of gp130 in the developing and adult mouse cerebellum. J Chem Neuroanat 19: 129-41 PubMed GONUTS page
  14. ↑ Giménez Y Ribotta M et al. (2000) Comparative anatomy of the cerebellar cortex in mice lacking vimentin, GFAP, and both vimentin and GFAP. Glia 31: 69-83 PubMed GONUTS page
Retrieved from "http://gowiki.tamu.edu/wiki/index.php/MOUSE:VIME"
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