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MOUSE:P53

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Contents

Species (Taxon ID) Mus musculus (Mouse). (taxon:10090)
Gene Name(s) Tp53 ( synonyms: P53, Trp53 )
Protein Name(s)
  • Cellular tumor antigen p53
  • Tumor suppressor p53
External Links
UniProt Identifier P53_MOUSE
UniProt Accessions P02340, Q9QUP3,
EMBL X00876, X00877, X00878, X00879, X00880, X00881, X00882, X00883, X00884, X00885, X01237, X00741, M13872, M13873, M13874, AB021961, AF151353, AB017815, AB017816, AB020317, BC005448, S77930,
PIR A22739, S38824,
RefSeq NP_001120705.1, NP_035770.2,
PDB 1HU8, 2GEQ, 2IOI, 2IOM, 2IOO, 2P52, 3EXJ, 3EXL,
IntAct P02340,
Ensembl ENSMUST00000005371,
Pfam PF00870, PF08563, PF07710,

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0005829

cytosol

IDA: Inferred from Direct Assay

C

Source: MGI

GO:0005783

endoplasmic reticulum

IEA: Inferred from Electronic Annotation

C

Source: UniProtKB-SubCell

GO:0005739

mitochondrion

ISS: Inferred from Sequence or Structural Similarity

C

Source: UniProtKB

GO:0005730

nucleolus

ISS: Inferred from Sequence or Structural Similarity

C

Source: UniProtKB

GO:0005657

replication fork

IDA: Inferred from Direct Assay

C

Source: MGI

GO:0005524

ATP binding

ISS: Inferred from Sequence or Structural Similarity

F

Source: UniProtKB

GO:0003682

chromatin binding

IDA: Inferred from Direct Assay

F

Source: MGI

GO:0005507

copper ion binding

ISS: Inferred from Sequence or Structural Similarity

F

Source: UniProtKB

GO:0000739

DNA strand annealing activity

ISS: Inferred from Sequence or Structural Similarity

F

Source: UniProtKB

GO:0035033

histone deacetylase regulator activity

IDA: Inferred from Direct Assay

F

Source: MGI

GO:0003700

sequence-specific DNA binding transcription factor activity

IDA: Inferred from Direct Assay

F

Source: MGI

GO:0016566

specific transcriptional repressor activity

IMP: Inferred from Mutant Phenotype

F

Source: BHF-UCL

GO:0008270

zinc ion binding

IEA: Inferred from Electronic Annotation

F

Source: InterPro

GO:0008635

activation of caspase activity by cytochrome c

ISS: Inferred from Sequence or Structural Similarity

P

Source: UniProtKB

GO:0002326

B cell lineage commitment

IMP: Inferred from Mutant Phenotype

P

Source: MGI

GO:0007569

cell aging

ISS: Inferred from Sequence or Structural Similarity

P

Source: UniProtKB

GO:0034644

cellular response to UV

IGI: Inferred from Genetic Interaction

P

Source: MGI

GO:0007417

central nervous system development

IGI: Inferred from Genetic Interaction

P

Source: MGI

GO:0051276

chromosome organization

IGI: Inferred from Genetic Interaction

P

Source: MGI

GO:0006977

DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest

IGI: Inferred from Genetic Interaction

P

Source: MGI

GO:0042771

DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis

IMP: Inferred from Mutant Phenotype

P

Source: MGI

GO:0006302

double-strand break repair

IMP: Inferred from Mutant Phenotype

P

Source: MGI

GO:0007369

gastrulation

IGI: Inferred from Genetic Interaction

P

Source: MGI

GO:0001701

in utero embryonic development

IGI: Inferred from Genetic Interaction

P

Source: MGI

GO:0035264

multicellular organism growth

IGI: Inferred from Genetic Interaction

P

Source: MGI

GO:0043066

negative regulation of apoptosis

IMP: Inferred from Mutant Phenotype

P

Source: MGI

GO:0030308

negative regulation of cell growth

ISS: Inferred from Sequence or Structural Similarity

P

Source: UniProtKB

GO:0008156

negative regulation of DNA replication

IDA: Inferred from Direct Assay

P

Source: MGI

GO:0048147

negative regulation of fibroblast proliferation

IMP: Inferred from Mutant Phenotype

P

Source: MGI

GO:0010553

negative regulation of gene-specific transcription from RNA polymerase II promoter

IMP: Inferred from Mutant Phenotype

P

Source: BHF-UCL

GO:0007406

negative regulation of neuroblast proliferation

IGI: Inferred from Genetic Interaction

P

Source: MGI

GO:0030512

negative regulation of transforming growth factor beta receptor signaling pathway

IMP: Inferred from Mutant Phenotype

P

Source: MGI

GO:0006289

nucleotide-excision repair

ISS: Inferred from Sequence or Structural Similarity

P

Source: UniProtKB

GO:0031065

positive regulation of histone deacetylation

IDA: Inferred from Direct Assay

P

Source: MGI

GO:0043525

positive regulation of neuron apoptosis

IDA: Inferred from Direct Assay

P

Source: MGI

GO:0050731

positive regulation of peptidyl-tyrosine phosphorylation

IMP: Inferred from Mutant Phenotype

P

Source: BHF-UCL

GO:0000060

protein import into nucleus, translocation

IDA: Inferred from Direct Assay

P

Source: MGI

GO:0046902

regulation of mitochondrial membrane permeability

IGI: Inferred from Genetic Interaction

P

Source: MGI

GO:0001836

release of cytochrome c from mitochondria

IDA: Inferred from Direct Assay

P

Source: MGI

GO:0042493

response to drug

IDA: Inferred from Direct Assay

P

Source: MGI

GO:0010332

response to gamma radiation

IDA: Inferred from Direct Assay

P

Source: MGI

GO:0009651

response to salt stress

IGI: Inferred from Genetic Interaction

P

Source: MGI

GO:0002347

response to tumor cell

IEA: Inferred from Electronic Annotation

P

Source: InterPro

GO:0010165

response to X-ray

IDA: Inferred from Direct Assay

P

Source: MGI

GO:0009303

rRNA transcription

IGI: Inferred from Genetic Interaction

P

Source: MGI

GO:0001756

somitogenesis

IGI: Inferred from Genetic Interaction

P

Source: MGI

GO:0033077

T cell differentiation in thymus

IGI: Inferred from Genetic Interaction

P

Source: MGI

GO:0002360

T cell lineage commitment

IMP: Inferred from Mutant Phenotype

P

Source: MGI

GO:0002309

T cell proliferation involved in immune response

IGI: Inferred from Genetic Interaction

P

Source: MGI

GO:0007179

transforming growth factor beta receptor signaling pathway

IGI: Inferred from Genetic Interaction

P

Source: MGI

GO:0010259

multicellular organismal aging

PMID:20818388[1]

IMP: Inferred from Mutant Phenotype

P

When compared with p53+/+ mice, p53TSD/– mice had a significantly shorter lifespan and died by 6 weeks of age (Fig. 1c)

complete

GO:0090343

positive regulation of cell aging

PMID:20818388[1]

IMP: Inferred from Mutant Phenotype

P

Furthermore, p53TSD/– mice exhibited a number of ageing-related phenotypes, including acute spine curvature (Fig. 1d), hypoplasia in the bone marrow (Fig. 2a) and lymphopenia and anaemia (Fig. 2c, d).

complete

GO:0071865

regulation of apoptosis in bone marrow

PMID:20818388[1]

IMP: Inferred from Mutant Phenotype

P

Figure 2b Progressive degeneration of the haematopoietic system in p53TSD/– mice. LSK cells are progressively depleted in p53+/+ and p53TSD/– mice.

Note: a new more specific term (Positive regulation of apoptosis in haematopoietic stem cells) is suggested.

complete

GO:0071425

cell proliferation in bone marrow

PMID:20818388[1]

IMP: Inferred from Mutant Phenotype

P

Figure 2 Progressive degeneration of the haematopoietic system in p53TSD/– mice. (b) LSK cells are progressively depleted in p53+/+ and p53TSD/– mice.

Note: a new more specific term (Negative regulation of hemopoietic stem cell proliferation) is suggested

complete

GO:0002902

regulation of B cell apoptosis

PMID:20818388[1]

IMP: Inferred from Mutant Phenotype

P

Figure 2c. Lymphopenia in p53TSD/– mice. The number of T- and B-cells in the spleen of two-week-old p53TSD/– is decreased compared to wild type.

Note: a new more specific term (Negative regulation of B cell apoptosis) is suggested

complete

GO:0070232

regulation of T cell apoptosis

PMID:20818388[1]

IMP: Inferred from Mutant Phenotype

P

Figure 2c. Lymphopenia in p53TSD/– mice. The number of T- and B-cells in the spleen of two-week-old p53TSD/– is decreased compared to wild type.


Note: a new more specific term (Negative regulation of T cell apoptosis) is suggested

complete

GO:0070245

positive regulation of thymocyte apoptosis

PMID:20818388[1]

IMP: Inferred from Mutant Phenotype

P

The number of thymocytes was markedly reduced in p53TSD/– mice when compared with wild-type controls (Fig. 1f).

complete

GO:2000178

negative regulation of neural precursor cell proliferation

PMID:20818388[1]

IMP: Inferred from Mutant Phenotype

P

Using Sox2, a marker specific for adult neural stem cells, we confirmed that neural stem cells are depleted in the dentate gyrus of one-month-old p53TSD/– mice (Fig. 3b).

complete

GO:2000019

negative regulation of male gonad development

PMID:20818388[1]

IMP: Inferred from Mutant Phenotype

P

The size of the p53TSD/– mice testes became increasingly smaller (Testicular atrophy) (Fig. 4a, b).

complete

GO:0048133

male germ-line stem cell division

PMID:20818388[1]

IMP: Inferred from Mutant Phenotype

P

The impaired spermatogenesis was because of the decreased number of SSCs (spermatogonial stem cells) (Epcam+, α6-integrin+ and c-Kit–) in the testes of p53TSD/– mice (Fig. 4c).


Note: a new more specific term (Negative regulation of male germ-line stem cell division) is suggested

complete

GO:0008630

DNA damage response, signal transduction resulting in induction of apoptosis

PMID:20818388[1]

IMP: Inferred from Mutant Phenotype

P

Figure S2 DNA damage responses in thymocytes of different genotypes. (a) p53-dependent apoptosis in p53-/-, p53+/+, p53+/- and p53TSD/- thymocytes 10hrs after treating with 5, 10 and 20Gy of IR.

complete

GO:0050680

negative regulation of epithelial cell proliferation

PMID:20818388[1]

IMP: Inferred from Mutant Phenotype

P

Figure S6 Apoptosis is significantly increased in the crypt of small intestine of p53TSD/- mice.

complete

GO:0042769

DNA damage response, detection of DNA damage

PMID:20818388[1]

IMP: Inferred from Mutant Phenotype

P

Figure S2 DNA damage responses in thymocytes of different genotypes. (a) p53-dependent apoptosis in p53-/-, p53+/+, p53+/- and p53TSD/- thymocytes 10hrs after treating with 5, 10 and 20Gy of IR.

complete

GO:0008285

negative regulation of cell proliferation

PMID:20818388[1]

IMP: Inferred from Mutant Phenotype

P

the p53TSD/– mice were similar to their wild-type littermates by 2 weeks of age, these mice became runted and weighed about 50% of the sex- and age-matched p53+/+- and p53+/–-mice by 4 weeks of age (Fig. 1a,b).

complete

GO:0010552

positive regulation of gene-specific transcription from RNA polymerase II promoter

PMID:20818388[1]

IMP: Inferred from Mutant Phenotype

P

the expression of p53-target genes p21 and Puma in different tissues of p53TSD/– and wild-type mice were compared, including in brain, kidney, small intestine, liver, lung, skin and spleen. The mRNA levels of Puma and p21 were increased in most tissues of p53TSD/– mice, indicating that p53 is constitutively active in p53TSD/– mice (Supplementary Information, Fig. S2).

complete

GO:0030308

negative regulation of cell growth

PMID:20818388[1]

IMP: Inferred from Mutant Phenotype

P

Figure 1B. Growth rate of p53+/+, p53+/– and p53TSD/– mice between 14 and 28 days postnatal show decreased growth.

complete

GO:0043065

positive regulation of apoptosis

PMID:20818388[1]

IMP: Inferred from Mutant Phenotype

P

Figure S4e. Increased apoptosis of spermatogonia.

complete

GO:0070215

MDM2 binding

PMID:20818388[1]

IPI: Inferred from Physical Interaction

UniProtKB:P23804


F

The TSD mutation partially disrupted the interaction between p53 and its negative regulator Mdm2, accounting for the increased p53 stability and activity in p53TSD/– cells (Fig. 1g, h and Supplementary Information, Fig. S1g).

complete

GO:0000060

protein import into nucleus, translocation

PMID:11799106[2]

IDA: Inferred from Direct Assay

P

GO:0000122

negative regulation of transcription from RNA polymerase II promoter

PMID:15657445[3]

IGI: Inferred from Genetic Interaction

MGI:MGI:106203

P

GO:0000122

negative regulation of transcription from RNA polymerase II promoter

PMID:18212064[4]

IGI: Inferred from Genetic Interaction

MGI:MGI:98725

P

GO:0000122

negative regulation of transcription from RNA polymerase II promoter

PMID:19411634[5]

IGI: Inferred from Genetic Interaction

MGI:MGI:95661

P

GO:0000122

negative regulation of transcription from RNA polymerase II promoter

PMID:19749791[6]

IMP: Inferred from Mutant Phenotype

P

GO:0000122

negative regulation of transcription from RNA polymerase II promoter

PMID:8183579[7]

IDA: Inferred from Direct Assay

P

GO:0000733

DNA strand renaturation

GO_REF:0000024

ISS: Inferred from Sequence or Structural Similarity

UniProtKB:P04637

P

GO:0000739

DNA strand annealing activity

GO_REF:0000024

ISS: Inferred from Sequence or Structural Similarity

UniProtKB:P04637

F

GO:0000785

chromatin

GO_REF:0000033

ISS: Inferred from Sequence or Structural Similarity

PANTHER:PTHR11447

C

GO:0001701

in utero embryonic development

PMID:17325035[8]

IGI: Inferred from Genetic Interaction

MGI:MGI:1343101

P

GO:0001701

in utero embryonic development

PMID:9288110[9]

IGI: Inferred from Genetic Interaction

MGI:MGI:101816

P

GO:0001756

somitogenesis

PMID:17320900[10]

IGI: Inferred from Genetic Interaction

MGI:MGI:1343101

P

GO:0001836

release of cytochrome c from mitochondria

PMID:14963330[11]

IGI: Inferred from Genetic Interaction

MGI:MGI:99702

P

GO:0001836

release of cytochrome c from mitochondria

PMID:15483136[12]

IDA: Inferred from Direct Assay

P

GO:0002039

p53 binding

GO_REF:0000033

ISS: Inferred from Sequence or Structural Similarity

PANTHER:PTHR11447

F

GO:0002309

T cell proliferation involved in immune response

PMID:16357222[13]

IGI: Inferred from Genetic Interaction

MGI:MGI:98159

P

GO:0002326

B cell lineage commitment

PMID:8788039[14]

IMP: Inferred from Mutant Phenotype

MGI:MGI:1857590

P

GO:0002360

T cell lineage commitment

PMID:8788039[14]

IMP: Inferred from Mutant Phenotype

MGI:MGI:1857590

P

GO:0003677

DNA binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR002117

F

GO:0003677

DNA binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR012346

F

GO:0003677

DNA binding

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0238

F

GO:0003677

DNA binding

GO_REF:0000024

ISS: Inferred from Sequence or Structural Similarity

UniProtKB:P04637

F

GO:0003677

DNA binding

PMID:10205143[15]

IDA: Inferred from Direct Assay

F

GO:0003677

DNA binding

PMID:12135983[16]

IDA: Inferred from Direct Assay

F

GO:0003677

DNA binding

PMID:16107883[17]

IDA: Inferred from Direct Assay

F

GO:0003677

DNA binding

PMID:16363065[18]

IDA: Inferred from Direct Assay

F

GO:0003682

chromatin binding

PMID:15657445[3]

IDA: Inferred from Direct Assay

F

GO:0003682

chromatin binding

PMID:18212064[4]

IDA: Inferred from Direct Assay

F

GO:0003684

damaged DNA binding

GO_REF:0000033

ISS: Inferred from Sequence or Structural Similarity

PANTHER:PTHR11447

F

GO:0003690

double-stranded DNA binding

GO_REF:0000033

ISS: Inferred from Sequence or Structural Similarity

PANTHER:PTHR11447

F

GO:0003700

sequence-specific DNA binding transcription factor activity

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR002117

F

GO:0003700

sequence-specific DNA binding transcription factor activity

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR008967

F

GO:0003700

sequence-specific DNA binding transcription factor activity

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR012346

F

GO:0003700

sequence-specific DNA binding transcription factor activity

PMID:12135983[16]

IDA: Inferred from Direct Assay

F

GO:0003700

sequence-specific DNA binding transcription factor activity

PMID:16044147[19]

IDA: Inferred from Direct Assay

F

GO:0003700

sequence-specific DNA binding transcription factor activity

PMID:16098148[20]

IDA: Inferred from Direct Assay

F

GO:0005507

copper ion binding

GO_REF:0000024

ISS: Inferred from Sequence or Structural Similarity

UniProtKB:P04637

F

GO:0005515

protein binding

PMID:10205143[15]

IPI: Inferred from Physical Interaction

UniProtKB:P23804

F

GO:0005515

protein binding

PMID:10329696[21]

IPI: Inferred from Physical Interaction

UniProtKB:Q9Z2R2

F

GO:0005515

protein binding

PMID:10951572[22]

IPI: Inferred from Physical Interaction

UniProtKB:Q99986

F

GO:0005515

protein binding

PMID:11274052[23]

IPI: Inferred from Physical Interaction

UniProtKB:P03070

F

GO:0005515

protein binding

PMID:11388671[24]

IPI: Inferred from Physical Interaction

UniProtKB:Q8N2W9

F

GO:0005515

protein binding

PMID:11672522[25]

IPI: Inferred from Physical Interaction

UniProtKB:Q923E4

F

GO:0005515

protein binding

PMID:11799106[2]

IPI: Inferred from Physical Interaction

UniProtKB:Q9Z1E3

F

GO:0005515

protein binding

PMID:11900485[26]

IPI: Inferred from Physical Interaction

UniProtKB:P38647

F

GO:0005515

protein binding

PMID:14963330[11]

IPI: Inferred from Physical Interaction

UniProtKB:Q64373-1

F

GO:0005515

protein binding

PMID:15364958[27]

IPI: Inferred from Physical Interaction

UniProtKB:P70399

F

GO:0005515

protein binding

PMID:15526030[28]

IPI: Inferred from Physical Interaction

UniProtKB:O35625

F

GO:0005515

protein binding

PMID:15526030[28]

IPI: Inferred from Physical Interaction

UniProtKB:Q9QZR5

F

GO:0005515

protein binding

PMID:15678128[29]

IPI: Inferred from Physical Interaction

UniProtKB:P23804

F

GO:0005515

protein binding

PMID:15735665[30]

IPI: Inferred from Physical Interaction

UniProtKB:Q80Z37

F

GO:0005515

protein binding

PMID:15782130[31]

IPI: Inferred from Physical Interaction

UniProtKB:O70445

F

GO:0005515

protein binding

PMID:15989966[32]

IPI: Inferred from Physical Interaction

UniProtKB:P23804

F

GO:0005515

protein binding

PMID:16151013[33]

IPI: Inferred from Physical Interaction

UniProtKB:Q07817-1

F

GO:0005515

protein binding

PMID:16151013[33]

IPI: Inferred from Physical Interaction

UniProtKB:Q64373

F

GO:0005515

protein binding

PMID:17157788[34]

IPI: Inferred from Physical Interaction

UniProtKB:O96017

F

GO:0005515

protein binding

PMID:17157788[34]

IPI: Inferred from Physical Interaction

UniProtKB:Q13315

F

GO:0005515

protein binding

PMID:17254968[35]

IPI: Inferred from Physical Interaction

UniProtKB:O54992

F

GO:0005515

protein binding

PMID:17274640[36]

IPI: Inferred from Physical Interaction

UniProtKB:P63087-1

F

GO:0005515

protein binding

PMID:17936560[37]

IPI: Inferred from Physical Interaction

UniProtKB:P23804

F

GO:0005515

protein binding

PMID:18303029[38]

IPI: Inferred from Physical Interaction

UniProtKB:Q61466

F

GO:0005515

protein binding

PMID:18332125[39]

IPI: Inferred from Physical Interaction

UniProtKB:O08586

F

GO:0005515

protein binding

PMID:18612383[40]

IPI: Inferred from Physical Interaction

UniProtKB:Q09472

F

GO:0005515

protein binding

PMID:19411634[5]

IPI: Inferred from Physical Interaction

UniProtKB:P17679

F

GO:0005515

protein binding

PMID:19556538[41]

IPI: Inferred from Physical Interaction

UniProtKB:Q64127

F

GO:0005515

protein binding

PMID:20697359[42]

IPI: Inferred from Physical Interaction

UniProtKB:P23804-1

F

GO:0005524

ATP binding

GO_REF:0000024

ISS: Inferred from Sequence or Structural Similarity

UniProtKB:P04637

F

GO:0005634

nucleus

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR002117

C

GO:0005634

nucleus

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR012346

C

GO:0005634

nucleus

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0539

C

GO:0005634

nucleus

GO_REF:0000023

IEA: Inferred from Electronic Annotation

SP_SL:SL-0191

C

GO:0005634

nucleus

GO_REF:0000024

ISS: Inferred from Sequence or Structural Similarity

UniProtKB:P04637

C

GO:0005634

nucleus

PMID:11799106[2]

IDA: Inferred from Direct Assay

C

GO:0005634

nucleus

PMID:11900485[26]

IDA: Inferred from Direct Assay

C

GO:0005634

nucleus

PMID:12524542[43]

IDA: Inferred from Direct Assay

C

GO:0005634

nucleus

PMID:14729462[44]

IDA: Inferred from Direct Assay

C

GO:0005634

nucleus

PMID:18332125[39]

IDA: Inferred from Direct Assay

C

GO:0005634

nucleus

PMID:18545656[45]

IDA: Inferred from Direct Assay

C

GO:0005657

replication fork

PMID:15364958[27]

IDA: Inferred from Direct Assay

C

GO:0005667

transcription factor complex

GO_REF:0000033

ISS: Inferred from Sequence or Structural Similarity

PANTHER:PTHR11447

C

GO:0005730

nucleolus

GO_REF:0000024

ISS: Inferred from Sequence or Structural Similarity

UniProtKB:P04637

C

GO:0005737

cytoplasm

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0963

C

GO:0005737

cytoplasm

GO_REF:0000023

IEA: Inferred from Electronic Annotation

SP_SL:SL-0086

C

GO:0005737

cytoplasm

GO_REF:0000024

ISS: Inferred from Sequence or Structural Similarity

UniProtKB:P04637

C

GO:0005737

cytoplasm

PMID:11799106[2]

IDA: Inferred from Direct Assay

C

GO:0005737

cytoplasm

PMID:11900485[26]

IDA: Inferred from Direct Assay

C

GO:0005737

cytoplasm

PMID:12524542[43]

IDA: Inferred from Direct Assay

C

GO:0005739

mitochondrion

GO_REF:0000024

ISS: Inferred from Sequence or Structural Similarity

UniProtKB:P04637

C

GO:0005739

mitochondrion

GO_REF:0000033

ISS: Inferred from Sequence or Structural Similarity

PANTHER:PTHR11447

C

GO:0005783

endoplasmic reticulum

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0256

C

GO:0005783

endoplasmic reticulum

GO_REF:0000023

IEA: Inferred from Electronic Annotation

SP_SL:SL-0095

C

GO:0005829

cytosol

PMID:11799106[2]

IDA: Inferred from Direct Assay

C

GO:0006289

nucleotide-excision repair

GO_REF:0000024

ISS: Inferred from Sequence or Structural Similarity

UniProtKB:P04637

P

GO:0006302

double-strand break repair

PMID:17912366[46]

IMP: Inferred from Mutant Phenotype

MGI:MGI:1857989

P

GO:0006351

transcription, DNA-dependent

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0804

P

GO:0006351

transcription, DNA-dependent

PMID:12135983[16]

IDA: Inferred from Direct Assay

P

GO:0006351

transcription, DNA-dependent

PMID:16044147[19]

IDA: Inferred from Direct Assay

P

GO:0006351

transcription, DNA-dependent

PMID:16098148[20]

IDA: Inferred from Direct Assay

P

GO:0006355

regulation of transcription, DNA-dependent

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR002117

P

GO:0006355

regulation of transcription, DNA-dependent

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR008967

P

GO:0006355

regulation of transcription, DNA-dependent

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR012346

P

GO:0006355

regulation of transcription, DNA-dependent

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0805

P

GO:0006355

regulation of transcription, DNA-dependent

PMID:12135983[16]

IDA: Inferred from Direct Assay

P

GO:0006915

apoptosis

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR002117

P

GO:0006915

apoptosis

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0053

P

GO:0006915

apoptosis

GO_REF:0000024

ISS: Inferred from Sequence or Structural Similarity

UniProtKB:P04637

P

GO:0006915

apoptosis

PMID:14963330[11]

IGI: Inferred from Genetic Interaction

MGI:MGI:99702

P

GO:0006915

apoptosis

PMID:15485914[47]

IGI: Inferred from Genetic Interaction

MGI:MGI:97740

P

GO:0006915

apoptosis

PMID:16183742[48]

IDA: Inferred from Direct Assay

P

GO:0006915

apoptosis

PMID:17325035[8]

IGI: Inferred from Genetic Interaction

MGI:MGI:1343101

P

GO:0006917

induction of apoptosis

PMID:16107883[17]

IDA: Inferred from Direct Assay

P

GO:0006917

induction of apoptosis

PMID:17210642[49]

IMP: Inferred from Mutant Phenotype

MGI:MGI:1857590

P

GO:0006974

response to DNA damage stimulus

PMID:11092819[50]

IMP: Inferred from Mutant Phenotype

MGI:MGI:1857590

P

GO:0006974

response to DNA damage stimulus

PMID:12952892[51]

IMP: Inferred from Mutant Phenotype

MGI:MGI:1926340

P

GO:0006974

response to DNA damage stimulus

PMID:14744935[52]

IDA: Inferred from Direct Assay

P

GO:0006974

response to DNA damage stimulus

PMID:15383658[53]

IDA: Inferred from Direct Assay

P

GO:0006977

DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest

PMID:16107883[17]

IGI: Inferred from Genetic Interaction

MGI:MGI:108027

P

GO:0006978

DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator

GO_REF:0000033

ISS: Inferred from Sequence or Structural Similarity

PANTHER:PTHR11447

P

GO:0007049

cell cycle

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0131

P

GO:0007275

multicellular organismal development

GO_REF:0000024

ISS: Inferred from Sequence or Structural Similarity

UniProtKB:P04637

P

GO:0007369

gastrulation

PMID:17000767[54]

IGI: Inferred from Genetic Interaction

MGI:MGI:98159

P

GO:0007406

negative regulation of neuroblast proliferation

PMID:9608530[55]

IGI: Inferred from Genetic Interaction

MGI:MGI:97306

P

GO:0007417

central nervous system development

PMID:16199867[56]

IGI: Inferred from Genetic Interaction

MGI:MGI:1335098

P

GO:0007569

cell aging

GO_REF:0000024

ISS: Inferred from Sequence or Structural Similarity

UniProtKB:P04637

P

GO:0007569

cell aging

PMID:17053789[57]

IGI: Inferred from Genetic Interaction

MGI:MGI:1920086

P

GO:0008156

negative regulation of DNA replication

PMID:11884608[58]

IDA: Inferred from Direct Assay

P

GO:0008156

negative regulation of DNA replication

PMID:11884608[58]

IMP: Inferred from Mutant Phenotype

MGI:MGI:1926340

P

GO:0008285

negative regulation of cell proliferation

PMID:10591652[59]

IGI: Inferred from Genetic Interaction

MGI:MGI:97306

P

GO:0008285

negative regulation of cell proliferation

PMID:10591653[60]

IGI: Inferred from Genetic Interaction

MGI:MGI:97306

P

GO:0008285

negative regulation of cell proliferation

PMID:10973261[61]

IGI: Inferred from Genetic Interaction

MGI:MGI:97306

P

GO:0008285

negative regulation of cell proliferation

PMID:11246230[62]

IGI: Inferred from Genetic Interaction

MGI:MGI:97306

P

GO:0008285

negative regulation of cell proliferation

PMID:16107883[17]

IGI: Inferred from Genetic Interaction

MGI:MGI:108027

P

GO:0008285

negative regulation of cell proliferation

PMID:19749791[6]

IMP: Inferred from Mutant Phenotype

P

GO:0008340

determination of adult lifespan

PMID:20818388[1]

IMP: Inferred from Mutant Phenotype

P

GO:0008635

activation of caspase activity by cytochrome c

GO_REF:0000024

ISS: Inferred from Sequence or Structural Similarity

UniProtKB:P04637

P

GO:0009303

rRNA transcription

PMID:18809582[63]

IGI: Inferred from Genetic Interaction

MGI:MGI:104738

P

GO:0009411

response to UV

PMID:10815637[64]

IMP: Inferred from Mutant Phenotype

MGI:MGI:1857590

P

GO:0009411

response to UV

PMID:11092819[50]

IMP: Inferred from Mutant Phenotype

MGI:MGI:1857590

P

GO:0009411

response to UV

PMID:12952892[51]

IMP: Inferred from Mutant Phenotype

MGI:MGI:1926340

P

GO:0009411

response to UV

PMID:14744935[52]

IDA: Inferred from Direct Assay

P

GO:0009792

embryo development ending in birth or egg hatching

PMID:16702401[65]

IGI: Inferred from Genetic Interaction

MGI:MGI:2138319

P

GO:0010165

response to X-ray

PMID:11884608[58]

IDA: Inferred from Direct Assay

P

GO:0010332

response to gamma radiation

PMID:14744935[52]

IDA: Inferred from Direct Assay

P

GO:0010332

response to gamma radiation

PMID:17068116[66]

IMP: Inferred from Mutant Phenotype

MGI:MGI:1857590

P

GO:0016605

PML body

GO_REF:0000023

IEA: Inferred from Electronic Annotation

SP_SL:SL-0465

C

GO:0030308

negative regulation of cell growth

GO_REF:0000024

ISS: Inferred from Sequence or Structural Similarity

UniProtKB:P04637

P

GO:0030330

DNA damage response, signal transduction by p53 class mediator

PMID:11790307[67]

IDA: Inferred from Direct Assay

P

GO:0030330

DNA damage response, signal transduction by p53 class mediator

PMID:11884608[58]

IDA: Inferred from Direct Assay

P

GO:0030330

DNA damage response, signal transduction by p53 class mediator

PMID:16199867[56]

IGI: Inferred from Genetic Interaction

MGI:MGI:106184

P

GO:0030330

DNA damage response, signal transduction by p53 class mediator

PMID:17476307[68]

IGI: Inferred from Genetic Interaction

MGI:MGI:109337

P

GO:0030512

negative regulation of transforming growth factor beta receptor signaling pathway

PMID:15657445[3]

IMP: Inferred from Mutant Phenotype

P

GO:0031065

positive regulation of histone deacetylation

PMID:15657445[3]

IDA: Inferred from Direct Assay

P

GO:0031571

mitotic cell cycle G1/S transition DNA damage checkpoint

PMID:16107883[17]

IMP: Inferred from Mutant Phenotype

P

GO:0033077

T cell differentiation in thymus

PMID:16357222[13]

IGI: Inferred from Genetic Interaction

MGI:MGI:98159

P

GO:0034644

cellular response to UV

PMID:14963330[11]

IGI: Inferred from Genetic Interaction

MGI:MGI:99702

P

GO:0035033

histone deacetylase regulator activity

PMID:15657445[3]

IDA: Inferred from Direct Assay

F

GO:0035264

multicellular organism growth

PMID:17325035[8]

IGI: Inferred from Genetic Interaction

MGI:MGI:1343101

P

GO:0042127

regulation of cell proliferation

PMID:10716720[69]

IGI: Inferred from Genetic Interaction

MGI:MGI:88039

P

GO:0042127

regulation of cell proliferation

PMID:12878730[70]

IMP: Inferred from Mutant Phenotype

MGI:MGI:1857263

P

GO:0042493

response to drug

PMID:9098922[71]

IDA: Inferred from Direct Assay

P

GO:0042771

DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis

PMID:12952892[51]

IMP: Inferred from Mutant Phenotype

MGI:MGI:1926340

P

GO:0042771

DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis

PMID:16777961[72]

IMP: Inferred from Mutant Phenotype

MGI:MGI:1857263

P

GO:0042771

DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis

PMID:17476307[68]

IGI: Inferred from Genetic Interaction

MGI:MGI:109337

P

GO:0042771

DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis

PMID:20818388[1]

IMP: Inferred from Mutant Phenotype

P

GO:0043065

positive regulation of apoptosis

PMID:17068116[66]

IMP: Inferred from Mutant Phenotype

MGI:MGI:1857590

P

GO:0043065

positive regulation of apoptosis

PMID:9024662[73]

IGI: Inferred from Genetic Interaction

MGI:MGI:99702

P

GO:0043066

negative regulation of apoptosis

PMID:12952892[51]

IMP: Inferred from Mutant Phenotype

MGI:MGI:1926340

P

GO:0043066

negative regulation of apoptosis

PMID:17912366[46]

IMP: Inferred from Mutant Phenotype

MGI:MGI:1857989

P

GO:0043066

negative regulation of apoptosis

PMID:8183579[7]

IMP: Inferred from Mutant Phenotype

P

GO:0043523

regulation of neuron apoptosis

PMID:15483136[12]

IGI: Inferred from Genetic Interaction

MGI:MGI:1336991

P

GO:0043525

positive regulation of neuron apoptosis

PMID:10894779[74]

IDA: Inferred from Direct Assay

P

GO:0043525

positive regulation of neuron apoptosis

PMID:10911993[75]

IGI: Inferred from Genetic Interaction

MGI:MGI:1335098

P

GO:0043525

positive regulation of neuron apoptosis

PMID:11092819[50]

IMP: Inferred from Mutant Phenotype

MGI:MGI:1857590

P

GO:0043525

positive regulation of neuron apoptosis

PMID:11150333[76]

IMP: Inferred from Mutant Phenotype

MGI:MGI:1857590

P

GO:0043525

positive regulation of neuron apoptosis

PMID:15483136[12]

IMP: Inferred from Mutant Phenotype

MGI:MGI:1857590

P

GO:0043525

positive regulation of neuron apoptosis

PMID:16777961[72]

IGI: Inferred from Genetic Interaction

MGI:MGI:1927345

P

GO:0043525

positive regulation of neuron apoptosis

PMID:9608530[55]

IMP: Inferred from Mutant Phenotype

MGI:MGI:1857263

P

GO:0043565

sequence-specific DNA binding

GO_REF:0000033

ISS: Inferred from Sequence or Structural Similarity

PANTHER:PTHR11447

F

GO:0044212

transcription regulatory region DNA binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR011615

F

GO:0045892

negative regulation of transcription, DNA-dependent

PMID:19749791[6]

IMP: Inferred from Mutant Phenotype

P

GO:0045893

positive regulation of transcription, DNA-dependent

PMID:15735665[30]

IDA: Inferred from Direct Assay

P

GO:0045893

positive regulation of transcription, DNA-dependent

PMID:15735665[30]

IGI: Inferred from Genetic Interaction

MGI:MGI:2146189

P

GO:0045893

positive regulation of transcription, DNA-dependent

PMID:16044147[19]

IDA: Inferred from Direct Assay

P

GO:0045944

positive regulation of transcription from RNA polymerase II promoter

GO_REF:0000033

ISS: Inferred from Sequence or Structural Similarity

PANTHER:PTHR11447

P

GO:0045944

positive regulation of transcription from RNA polymerase II promoter

PMID:16098148[20]

IDA: Inferred from Direct Assay

P

GO:0045944

positive regulation of transcription from RNA polymerase II promoter

PMID:16107883[17]

IDA: Inferred from Direct Assay

P

GO:0045944

positive regulation of transcription from RNA polymerase II promoter

PMID:19411634[5]

IDA: Inferred from Direct Assay

P

GO:0045944

positive regulation of transcription from RNA polymerase II promoter

PMID:8183579[7]

IDA: Inferred from Direct Assay

P

GO:0046872

metal ion binding

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0479

F

GO:0046902

regulation of mitochondrial membrane permeability

PMID:14963330[11]

IGI: Inferred from Genetic Interaction

MGI:MGI:99702

P

GO:0048147

negative regulation of fibroblast proliferation

PMID:12952892[51]

IMP: Inferred from Mutant Phenotype

MGI:MGI:1926340

P

GO:0048147

negative regulation of fibroblast proliferation

PMID:17332504[77]

IMP: Inferred from Mutant Phenotype

P

GO:0050731

positive regulation of peptidyl-tyrosine phosphorylation

PMID:19749791[6]

IMP: Inferred from Mutant Phenotype

P

GO:0051262

protein tetramerization

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR010991

P

GO:0051276

chromosome organization

PMID:17200209[78]

IGI: Inferred from Genetic Interaction

MGI:MGI:88039

P

GO:0051726

regulation of cell cycle

PMID:15898111[79]

IMP: Inferred from Mutant Phenotype

MGI:MGI:1857263

P

GO:0051726

regulation of cell cycle

PMID:18332125[39]

IGI: Inferred from Genetic Interaction

MGI:MGI:109583

P

GO:0070215

MDM2 binding

PMID:20818388[1]

IPI: Inferred from Physical Interaction

UniProtKB:P23804

F

GO:0070245

positive regulation of thymocyte apoptosis

PMID:20818388[1]

IMP: Inferred from Mutant Phenotype

P

GO:0090343

positive regulation of cell aging

PMID:10562313[80]

IMP: Inferred from Mutant Phenotype

P

NOT

GO:0001701

in utero embryonic development

PMID:9425892[81]

IGI: Inferred from Genetic Interaction

MGI:MGI:101816

P


Notes

References

See Help:References for how to manage references in GONUTS.

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