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MGI:Tnf

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Contents

Species (Taxon ID) Mus musculus (house mouse) (taxon:10090)
Gene Name(s) Tnf ( synonyms: DIF, TNF alpha, TNF-alpha, Tnfa, TNFalpha, Tnfsf1a, tumor necrosis factor-alpha )
Protein Name(s) tumor necrosis factor,
External Links
MGI MGI:104798

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0000060

protein import into nucleus, translocation

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0000122

negative regulation of transcription from RNA polymerase II promoter

MGI:MGI:1097308
PMID:9305915[1]

IDA: Inferred from Direct Assay

P

From MGI

GO:0000122

negative regulation of transcription from RNA polymerase II promoter

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0000122

negative regulation of transcription from RNA polymerase II promoter

MGI:MGI:5285024
PMID:21689636[2]

IDA: Inferred from Direct Assay

P

From MGI

GO:0000165

MAPK cascade

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0000185

activation of MAPKKK activity

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0000187

activation of MAPK activity

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0001775

cell activation

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P16599

P

From MGI

GO:0001819

positive regulation of cytokine production

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0001891

phagocytic cup

MGI:MGI:3610792
PMID:16282525[3]

IDA: Inferred from Direct Assay

C

From MGI

GO:0001932

regulation of protein phosphorylation

MGI:MGI:3045683
PMID:15169905[4]

IDA: Inferred from Direct Assay

P

From MGI

GO:0001934

positive regulation of protein phosphorylation

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0002020

protease binding

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

F

From MGI

GO:0002020

protease binding

MGI:MGI:4942254
PMID:12135759[5]

IPI: Inferred from Physical Interaction

UniProtKB:Q05910

F

From MGI

GO:0002037

negative regulation of L-glutamate transport

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P16599

P

From MGI

GO:0002439

chronic inflammatory response to antigenic stimulus

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0002740

negative regulation of cytokine secretion involved in immune response

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0002876

positive regulation of chronic inflammatory response to antigenic stimulus

MGI:MGI:3690573
PMID:9834074[6]

IGI: Inferred from Genetic Interaction

MGI:MGI:104797

P

From MGI

GO:0002925

positive regulation of humoral immune response mediated by circulating immunoglobulin

MGI:MGI:3690573
PMID:9834074[6]

IGI: Inferred from Genetic Interaction

MGI:MGI:104797

P

From MGI

GO:0005125

cytokine activity

MGI:MGI:2152007
PMID:11588035[7]

IDA: Inferred from Direct Assay

F

From MGI

GO:0005125

cytokine activity

MGI:MGI:2176422
PMID:11894098[8]

IDA: Inferred from Direct Assay

F

From MGI

GO:0005125

cytokine activity

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

F

From MGI

GO:0005164

tumor necrosis factor receptor binding

MGI:MGI:1095831
PMID:9256477[9]

TAS: Traceable Author Statement

F

From MGI

GO:0005164

tumor necrosis factor receptor binding

MGI:MGI:1098089
PMID:9368616[10]

TAS: Traceable Author Statement

F

From MGI

GO:0005164

tumor necrosis factor receptor binding

MGI:MGI:1203431
PMID:9565643[11]

TAS: Traceable Author Statement

F

From MGI

GO:0005164

tumor necrosis factor receptor binding

MGI:MGI:2152007
PMID:11588035[7]

IDA: Inferred from Direct Assay

F

From MGI

GO:0005164

tumor necrosis factor receptor binding

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P16599

F

From MGI

GO:0005164

tumor necrosis factor receptor binding

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

F

From MGI

GO:0005164

tumor necrosis factor receptor binding

MGI:MGI:53235
PMID:8387893[12]

TAS: Traceable Author Statement

F

From MGI

GO:0005164

tumor necrosis factor receptor binding

MGI:MGI:59648
PMID:1645445[13]

IPI: Inferred from Physical Interaction

UniProtKB:P25119
UniProtKB:P25118

F

From MGI

GO:0005164

tumor necrosis factor receptor binding

MGI:MGI:62592
PMID:8395024[14]

TAS: Traceable Author Statement

F

From MGI

GO:0005164

tumor necrosis factor receptor binding

MGI:MGI:65999
PMID:8171322[15]

TAS: Traceable Author Statement

F

From MGI

GO:0005164

tumor necrosis factor receptor binding

MGI:MGI:894912
PMID:9223320[16]

TAS: Traceable Author Statement

F

From MGI

GO:0005515

protein binding

MGI:MGI:3624581
PMID:16702408[17]

IPI: Inferred from Physical Interaction

UniProtKB:Q9QWL7

F

From MGI

GO:0005576

extracellular region

MGI:MGI:1354194

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0964

C

From MGI

GO:0005615

extracellular space

MGI:MGI:1347429
PMID:10545106[18]

IDA: Inferred from Direct Assay

C

From MGI

GO:0005615

extracellular space

MGI:MGI:1861065
PMID:10899905[19]

IDA: Inferred from Direct Assay

C

From MGI

GO:0005615

extracellular space

MGI:MGI:1930064
PMID:11168643[20]

IDA: Inferred from Direct Assay

C

From MGI

GO:0005615

extracellular space

MGI:MGI:2154458

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

C

From MGI

GO:0005615

extracellular space

MGI:MGI:2176422
PMID:11894098[8]

IDA: Inferred from Direct Assay

C

From MGI

GO:0005615

extracellular space

MGI:MGI:2178646
PMID:10549626[21]

IDA: Inferred from Direct Assay

C

From MGI

GO:0005615

extracellular space

MGI:MGI:2669022
PMID:12855817[22]

IDA: Inferred from Direct Assay

C

From MGI

GO:0005615

extracellular space

MGI:MGI:2670551
PMID:12872135[23]

IDA: Inferred from Direct Assay

C

From MGI

GO:0005615

extracellular space

MGI:MGI:3029067
PMID:14764707[24]

IDA: Inferred from Direct Assay

C

From MGI

GO:0005615

extracellular space

MGI:MGI:3050756
PMID:15220916[25]

IDA: Inferred from Direct Assay

C

From MGI

GO:0005615

extracellular space

MGI:MGI:3510555
PMID:11728336[26]

IDA: Inferred from Direct Assay

C

From MGI

GO:0005615

extracellular space

MGI:MGI:3608246
PMID:16236719[27]

IDA: Inferred from Direct Assay

C

From MGI

GO:0005615

extracellular space

MGI:MGI:3611539
PMID:16239543[28]

IDA: Inferred from Direct Assay

C

From MGI

GO:0005615

extracellular space

MGI:MGI:3695768
PMID:16275384[29]

IDA: Inferred from Direct Assay

C

From MGI

GO:0005615

extracellular space

MGI:MGI:3761982
PMID:17693256[30]

IDA: Inferred from Direct Assay

C

From MGI

GO:0005615

extracellular space

MGI:MGI:3775161
PMID:18261938[31]

IDA: Inferred from Direct Assay

C

From MGI

GO:0005615

extracellular space

MGI:MGI:3823129
PMID:18997793[32]

IDA: Inferred from Direct Assay

C

From MGI

GO:0005615

extracellular space

MGI:MGI:49296
PMID:1577194[33]

IDA: Inferred from Direct Assay

C

From MGI

GO:0005622

intracellular

MGI:MGI:3689241
PMID:17015619[34]

IGI: Inferred from Genetic Interaction

MGI:MGI:1341850

C

From MGI

GO:0005622

intracellular

MGI:MGI:4358631
PMID:19723499[35]

IDA: Inferred from Direct Assay

C

From MGI

GO:0005622

intracellular

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P16599

C

From MGI

GO:0005622

intracellular

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

C

From MGI

GO:0005886

plasma membrane

MGI:MGI:3050738
PMID:15155767[36]

IDA: Inferred from Direct Assay

C

From MGI

GO:0005887

integral to plasma membrane

MGI:MGI:1306673
PMID:8879212[37]

TAS: Traceable Author Statement

C

From MGI

GO:0005887

integral to plasma membrane

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

C

From MGI

GO:0006006

glucose metabolic process

MGI:MGI:2181851
PMID:12068289[38]

IDA: Inferred from Direct Assay

P

From MGI

GO:0006915

apoptotic process

MGI:MGI:3709926
PMID:17242187[39]

IGI: Inferred from Genetic Interaction

MGI:MGI:97583

P

From MGI

GO:0006915

apoptotic process

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P16599

P

From MGI

GO:0006916

anti-apoptosis

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0006917

induction of apoptosis

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P16599

P

From MGI

GO:0006917

induction of apoptosis

MGI:MGI:4420852
PMID:20080598[40]

IGI: Inferred from Genetic Interaction

MGI:MGI:1928487
MGI:MGI:1929004

P

From MGI

GO:0006917

induction of apoptosis

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0006917

induction of apoptosis

MGI:MGI:67096
PMID:8208546[41]

IDA: Inferred from Direct Assay

P

From MGI

GO:0006919

activation of cysteine-type endopeptidase activity involved in apoptotic process

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0006927

transformed cell apoptotic process

MGI:MGI:1098089
PMID:9368616[10]

TAS: Traceable Author Statement

P

From MGI

GO:0006927

transformed cell apoptotic process

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0006927

transformed cell apoptotic process

MGI:MGI:65999
PMID:8171322[15]

TAS: Traceable Author Statement

P

From MGI

GO:0006927

transformed cell apoptotic process

MGI:MGI:75691
PMID:7636227[42]

TAS: Traceable Author Statement

P

From MGI

GO:0006952

defense response

MGI:MGI:62592
PMID:8395024[14]

IMP: Inferred from Mutant Phenotype

MGI:MGI:1861040

P

From MGI

GO:0006952

defense response

MGI:MGI:894912
PMID:9223320[16]

IMP: Inferred from Mutant Phenotype

MGI:MGI:1860250

P

From MGI

GO:0006954

inflammatory response

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0006954

inflammatory response

MGI:MGI:53235
PMID:8387893[12]

TAS: Traceable Author Statement

P

From MGI

GO:0006954

inflammatory response

MGI:MGI:65999
PMID:8171322[15]

TAS: Traceable Author Statement

P

From MGI

GO:0006955

immune response

MGI:MGI:2152098

IEA: Inferred from Electronic Annotation

InterPro:IPR006052
InterPro:IPR006053
InterPro:IPR002959

P

From MGI

GO:0006959

humoral immune response

MGI:MGI:1306673
PMID:8879212[37]

IMP: Inferred from Mutant Phenotype

MGI:MGI:2149024

P

From MGI

GO:0007165

signal transduction

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P16599

P

From MGI

GO:0007254

JNK cascade

MGI:MGI:3689241
PMID:17015619[34]

IGI: Inferred from Genetic Interaction

MGI:MGI:1341850

P

From MGI

GO:0007275

multicellular organismal development

MGI:MGI:1098089
PMID:9368616[10]

IMP: Inferred from Mutant Phenotype

MGI:MGI:1860953

P

From MGI

GO:0008283

cell proliferation

MGI:MGI:75691
PMID:7636227[42]

TAS: Traceable Author Statement

P

From MGI

GO:0008284

positive regulation of cell proliferation

MGI:MGI:65999
PMID:8171322[15]

TAS: Traceable Author Statement

P

From MGI

GO:0008285

negative regulation of cell proliferation

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P16599

P

From MGI

GO:0008624

induction of apoptosis by extracellular signals

MGI:MGI:3525895
PMID:15629131[43]

IDA: Inferred from Direct Assay

P

From MGI

GO:0008624

induction of apoptosis by extracellular signals

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0008625

induction of apoptosis via death domain receptors

MGI:MGI:3029504
PMID:12431371[44]

IGI: Inferred from Genetic Interaction

MGI:MGI:1096330

P

From MGI

GO:0008625

induction of apoptosis via death domain receptors

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0009615

response to virus

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0009887

organ morphogenesis

MGI:MGI:1306673
PMID:8879212[37]

IMP: Inferred from Mutant Phenotype

MGI:MGI:2149024

P

From MGI

GO:0009897

external side of plasma membrane

MGI:MGI:3610792
PMID:16282525[3]

IDA: Inferred from Direct Assay

C

From MGI

GO:0009897

external side of plasma membrane

MGI:MGI:5013872
PMID:21606376[45]

IDA: Inferred from Direct Assay

C

From MGI

GO:0009986

cell surface

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

C

From MGI

GO:0010629

negative regulation of gene expression

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0010693

negative regulation of alkaline phosphatase activity

MGI:MGI:5285024
PMID:21689636[2]

IDA: Inferred from Direct Assay

P

From MGI

GO:0016020

membrane

MGI:MGI:1354194

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0472

C

From MGI

GO:0016020

membrane

MGI:MGI:2152098

IEA: Inferred from Electronic Annotation

InterPro:IPR006052
InterPro:IPR006053
InterPro:IPR002959

C

From MGI

GO:0016021

integral to membrane

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P16599

C

From MGI

GO:0019722

calcium-mediated signaling

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P16599

P

From MGI

GO:0030141

secretory granule

MGI:MGI:1306673
PMID:8879212[37]

TAS: Traceable Author Statement

C

From MGI

GO:0030198

extracellular matrix organization

MGI:MGI:3510270
PMID:15381731[46]

IDA: Inferred from Direct Assay

P

From MGI

GO:0030316

osteoclast differentiation

MGI:MGI:3525391
PMID:15485831[47]

IGI: Inferred from Genetic Interaction

MGI:MGI:1100089
MGI:MGI:99484

P

From MGI

GO:0030730

sequestering of triglyceride

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0031334

positive regulation of protein complex assembly

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0031622

positive regulation of fever generation

MGI:MGI:4413614
PMID:19940926[48]

IDA: Inferred from Direct Assay

P

From MGI

GO:0031663

lipopolysaccharide-mediated signaling pathway

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0032715

negative regulation of interleukin-6 production

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0032722

positive regulation of chemokine production

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0032729

positive regulation of interferon-gamma production

MGI:MGI:3690573
PMID:9834074[6]

IGI: Inferred from Genetic Interaction

MGI:MGI:104797

P

From MGI

GO:0032755

positive regulation of interleukin-6 production

MGI:MGI:2176422
PMID:11894098[8]

IDA: Inferred from Direct Assay

P

From MGI

GO:0032800

receptor biosynthetic process

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0033138

positive regulation of peptidyl-serine phosphorylation

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0033209

tumor necrosis factor-mediated signaling pathway

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0033209

tumor necrosis factor-mediated signaling pathway

MGI:MGI:63487
PMID:3898078[49]

IDA: Inferred from Direct Assay

P

From MGI

GO:0034116

positive regulation of heterotypic cell-cell adhesion

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0042127

regulation of cell proliferation

MGI:MGI:2176657
PMID:11799106[50]

IDA: Inferred from Direct Assay

P

From MGI

GO:0042346

positive regulation of NF-kappaB import into nucleus

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0042346

positive regulation of NF-kappaB import into nucleus

MGI:MGI:5285024
PMID:21689636[2]

IMP: Inferred from Mutant Phenotype

P

From MGI

GO:0042742

defense response to bacterium

MGI:MGI:1861065
PMID:10899905[19]

IDA: Inferred from Direct Assay

P

From MGI

GO:0042802

identical protein binding

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

F

From MGI

GO:0043065

positive regulation of apoptotic process

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0043066

negative regulation of apoptotic process

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0043068

positive regulation of programmed cell death

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0043122

regulation of I-kappaB kinase/NF-kappaB cascade

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0043123

positive regulation of I-kappaB kinase/NF-kappaB cascade

MGI:MGI:3039643
PMID:12867038[51]

IDA: Inferred from Direct Assay

P

From MGI

GO:0043123

positive regulation of I-kappaB kinase/NF-kappaB cascade

MGI:MGI:3607973
PMID:16260493[52]

IDA: Inferred from Direct Assay

P

From MGI

GO:0043123

positive regulation of I-kappaB kinase/NF-kappaB cascade

MGI:MGI:3607973
PMID:16260493[52]

IGI: Inferred from Genetic Interaction

MGI:MGI:1346877

P

From MGI

GO:0043123

positive regulation of I-kappaB kinase/NF-kappaB cascade

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P16599

P

From MGI

GO:0043123

positive regulation of I-kappaB kinase/NF-kappaB cascade

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0043243

positive regulation of protein complex disassembly

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0043406

positive regulation of MAP kinase activity

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0043491

protein kinase B signaling cascade

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0043525

positive regulation of neuron apoptotic process

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P16599

P

From MGI

GO:0044130

negative regulation of growth of symbiont in host

MGI:MGI:3690573
PMID:9834074[6]

IGI: Inferred from Genetic Interaction

MGI:MGI:104797

P

From MGI

GO:0044212

transcription regulatory region DNA binding

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

F

From MGI

GO:0045071

negative regulation of viral genome replication

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0045080

positive regulation of chemokine biosynthetic process

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0045121

membrane raft

MGI:MGI:3828392
PMID:17010968[53]

IDA: Inferred from Direct Assay

C

From MGI

GO:0045121

membrane raft

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

C

From MGI

GO:0045123

cellular extravasation

MGI:MGI:2658799
PMID:10528208[54]

IDA: Inferred from Direct Assay

P

From MGI

GO:0045416

positive regulation of interleukin-8 biosynthetic process

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0045429

positive regulation of nitric oxide biosynthetic process

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0045668

negative regulation of osteoblast differentiation

MGI:MGI:5285024
PMID:21689636[2]

IDA: Inferred from Direct Assay

P

From MGI

GO:0045670

regulation of osteoclast differentiation

MGI:MGI:2448204
PMID:12490655[55]

IDA: Inferred from Direct Assay

P

From MGI

GO:0045672

positive regulation of osteoclast differentiation

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0045840

positive regulation of mitosis

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P16599

P

From MGI

GO:0045892

negative regulation of transcription, DNA-dependent

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0045893

positive regulation of transcription, DNA-dependent

MGI:MGI:3608448
PMID:12761567[56]

IDA: Inferred from Direct Assay

P

From MGI

GO:0045893

positive regulation of transcription, DNA-dependent

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0045944

positive regulation of transcription from RNA polymerase II promoter

MGI:MGI:1097308
PMID:9305915[1]

IDA: Inferred from Direct Assay

P

From MGI

GO:0045944

positive regulation of transcription from RNA polymerase II promoter

MGI:MGI:2154458

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0045944

positive regulation of transcription from RNA polymerase II promoter

MGI:MGI:3761912
PMID:17670746[57]

IDA: Inferred from Direct Assay

P

From MGI

GO:0045944

positive regulation of transcription from RNA polymerase II promoter

MGI:MGI:3844151
PMID:19404405[58]

IDA: Inferred from Direct Assay

P

From MGI

GO:0045944

positive regulation of transcription from RNA polymerase II promoter

MGI:MGI:4412460
PMID:18025219[59]

IGI: Inferred from Genetic Interaction

MGI:MGI:107656

P

From MGI

GO:0045994

positive regulation of translational initiation by iron

MGI:MGI:2152007
PMID:11588035[7]

IDA: Inferred from Direct Assay

P

From MGI

GO:0046325

negative regulation of glucose import

MGI:MGI:2181851
PMID:12068289[38]

IDA: Inferred from Direct Assay

P

From MGI

GO:0046325

negative regulation of glucose import

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P16599

P

From MGI

GO:0046330

positive regulation of JNK cascade

MGI:MGI:3607973
PMID:16260493[52]

IDA: Inferred from Direct Assay

P

From MGI

GO:0046330

positive regulation of JNK cascade

MGI:MGI:3607973
PMID:16260493[52]

IGI: Inferred from Genetic Interaction

MGI:MGI:1346877

P

From MGI

GO:0046330

positive regulation of JNK cascade

MGI:MGI:4420852
PMID:20080598[40]

IDA: Inferred from Direct Assay

P

From MGI

GO:0048661

positive regulation of smooth muscle cell proliferation

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0050708

regulation of protein secretion

MGI:MGI:3848759
PMID:19293336[60]

IDA: Inferred from Direct Assay

P

From MGI

GO:0050715

positive regulation of cytokine secretion

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0050796

regulation of insulin secretion

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0050806

positive regulation of synaptic transmission

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P16599

P

From MGI

GO:0050830

defense response to Gram-positive bacterium

MGI:MGI:3690573
PMID:9834074[6]

IGI: Inferred from Genetic Interaction

MGI:MGI:104797

P

From MGI

GO:0050900

leukocyte migration

MGI:MGI:3036957
PMID:15034066[61]

IDA: Inferred from Direct Assay

P

From MGI

GO:0050901

leukocyte tethering or rolling

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0050995

negative regulation of lipid catabolic process

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0051023

regulation of immunoglobulin secretion

MGI:MGI:2680840
PMID:12958312[62]

IDA: Inferred from Direct Assay

P

From MGI

GO:0051044

positive regulation of membrane protein ectodomain proteolysis

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0051091

positive regulation of sequence-specific DNA binding transcription factor activity

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0051092

positive regulation of NF-kappaB transcription factor activity

MGI:MGI:3575325
PMID:15790681[63]

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0051092

positive regulation of NF-kappaB transcription factor activity

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0051222

positive regulation of protein transport

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P16599

P

From MGI

GO:0051222

positive regulation of protein transport

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0051384

response to glucocorticoid stimulus

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0051533

positive regulation of NFAT protein import into nucleus

MGI:MGI:2154458

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0051798

positive regulation of hair follicle development

MGI:MGI:3624581
PMID:16702408[17]

IMP: Inferred from Mutant Phenotype

P

From MGI

GO:0051897

positive regulation of protein kinase B signaling cascade

MGI:MGI:4420852
PMID:20080598[40]

IDA: Inferred from Direct Assay

P

From MGI

GO:0055037

recycling endosome

MGI:MGI:3610792
PMID:16282525[3]

IDA: Inferred from Direct Assay

C

From MGI

GO:0060555

induction of necroptosis by extracellular signals

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0060557

positive regulation of vitamin D biosynthetic process

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0060559

positive regulation of calcidiol 1-monooxygenase activity

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0060664

epithelial cell proliferation involved in salivary gland morphogenesis

MGI:MGI:1931422
PMID:11241200[64]

IDA: Inferred from Direct Assay

P

From MGI

GO:0060693

regulation of branching involved in salivary gland morphogenesis

MGI:MGI:1931422
PMID:11241200[64]

IDA: Inferred from Direct Assay

P

From MGI

GO:0060693

regulation of branching involved in salivary gland morphogenesis

MGI:MGI:1931422
PMID:11241200[64]

IMP: Inferred from Mutant Phenotype

P

From MGI

GO:0061048

negative regulation of branching involved in lung morphogenesis

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0070265

necrotic cell death

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0071230

cellular response to amino acid stimulus

MGI:MGI:4833768
PMID:20548288[65]

IDA: Inferred from Direct Assay

P

From MGI

GO:0071316

cellular response to nicotine

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0071407

cellular response to organic cyclic compound

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0071803

positive regulation of podosome assembly

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:0097191

extrinsic apoptotic signaling pathway

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:2000010

positive regulation of protein localization at cell surface

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI

GO:2000343

positive regulation of chemokine (C-X-C motif) ligand 2 production

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P01375

P

From MGI


Notes

References

See Help:References for how to manage references in GONUTS.
  1. ↑ 1.0 1.1 Hadri KE et al. (1997) Differential regulation by tumor necrosis factor-alpha of beta1-, beta2-, and beta3-adrenoreceptor gene expression in 3T3-F442A adipocytes. J Biol Chem 272: 24514-21 PubMed GONUTS page
  2. ↑ 2.0 2.1 2.2 2.3 Tsukasaki M et al. (2011) Expression of POEM, a positive regulator of osteoblast differentiation, is suppressed by TNF-α. Biochem Biophys Res Commun 410: 766-70 PubMed GONUTS page
  3. ↑ 3.0 3.1 3.2 Murray RZ et al. (2005) A role for the phagosome in cytokine secretion. Science 310: 1492-5 PubMed GONUTS page
  4. ↑ Ueki K et al. (2004) Suppressor of cytokine signaling 1 (SOCS-1) and SOCS-3 cause insulin resistance through inhibition of tyrosine phosphorylation of insulin receptor substrate proteins by discrete mechanisms. Mol Cell Biol 24: 5434-46 PubMed GONUTS page
  5. ↑ Amour A et al. (2002) The enzymatic activity of ADAM8 and ADAM9 is not regulated by TIMPs. FEBS Lett 524: 154-8 PubMed GONUTS page
  6. ↑ 6.0 6.1 6.2 6.3 6.4 Hultgren O et al. (1998) TNF/lymphotoxin-alpha double-mutant mice resist septic arthritis but display increased mortality in response to Staphylococcus aureus. J Immunol 161: 5937-42 PubMed GONUTS page
  7. ↑ 7.0 7.1 7.2 Carballo E & Blackshear PJ (2001) Roles of tumor necrosis factor-alpha receptor subtypes in the pathogenesis of the tristetraprolin-deficiency syndrome. Blood 98: 2389-95 PubMed GONUTS page
  8. ↑ 8.0 8.1 8.2 Kobayashi K et al. (2002) RICK/Rip2/CARDIAK mediates signalling for receptors of the innate and adaptive immune systems. Nature 416: 194-9 PubMed GONUTS page
  9. ↑ Alimzhanov MB et al. (1997) Abnormal development of secondary lymphoid tissues in lymphotoxin beta-deficient mice. Proc Natl Acad Sci U S A 94: 9302-7 PubMed GONUTS page
  10. ↑ 10.0 10.1 10.2 Körner H et al. (1997) Distinct roles for lymphotoxin-alpha and tumor necrosis factor in organogenesis and spatial organization of lymphoid tissue. Eur J Immunol 27: 2600-9 PubMed GONUTS page
  11. ↑ Sean Riminton D et al. (1998) Challenging cytokine redundancy: inflammatory cell movement and clinical course of experimental autoimmune encephalomyelitis are normal in lymphotoxin-deficient, but not tumor necrosis factor-deficient, mice. J Exp Med 187: 1517-28 PubMed GONUTS page
  12. ↑ 12.0 12.1 Pfeffer K et al. (1993) Mice deficient for the 55 kd tumor necrosis factor receptor are resistant to endotoxic shock, yet succumb to L. monocytogenes infection. Cell 73: 457-67 PubMed GONUTS page
  13. ↑ Goodwin RG et al. (1991) Molecular cloning and expression of the type 1 and type 2 murine receptors for tumor necrosis factor. Mol Cell Biol 11: 3020-6 PubMed GONUTS page
  14. ↑ 14.0 14.1 Rothe J et al. (1993) Mice lacking the tumour necrosis factor receptor 1 are resistant to TNF-mediated toxicity but highly susceptible to infection by Listeria monocytogenes. Nature 364: 798-802 PubMed GONUTS page
  15. ↑ 15.0 15.1 15.2 15.3 De Togni P et al. (1994) Abnormal development of peripheral lymphoid organs in mice deficient in lymphotoxin. Science 264: 703-7 PubMed GONUTS page
  16. ↑ 16.0 16.1 Marino MW et al. (1997) Characterization of tumor necrosis factor-deficient mice. Proc Natl Acad Sci U S A 94: 8093-8 PubMed GONUTS page
  17. ↑ 17.0 17.1 Tong X & Coulombe PA (2006) Keratin 17 modulates hair follicle cycling in a TNFalpha-dependent fashion. Genes Dev 20: 1353-64 PubMed GONUTS page
  18. ↑ Xiao X et al. (1999) HSF1 is required for extra-embryonic development, postnatal growth and protection during inflammatory responses in mice. EMBO J 18: 5943-52 PubMed GONUTS page
  19. ↑ 19.0 19.1 Fratazzi C et al. (2000) A macrophage invasion mechanism for mycobacteria implicating the extracellular domain of CD43. J Exp Med 192: 183-92 PubMed GONUTS page
  20. ↑ Bune AJ et al. (2001) Mice lacking tartrate-resistant acid phosphatase (Acp 5) have disordered macrophage inflammatory responses and reduced clearance of the pathogen, Staphylococcus aureus. Immunology 102: 103-13 PubMed GONUTS page
  21. ↑ Takeuchi O et al. (1999) Differential roles of TLR2 and TLR4 in recognition of gram-negative and gram-positive bacterial cell wall components. Immunity 11: 443-51 PubMed GONUTS page
  22. ↑ Yamamoto M et al. (2003) Role of adaptor TRIF in the MyD88-independent toll-like receptor signaling pathway. Science 301: 640-3 PubMed GONUTS page
  23. ↑ Hoebe K et al. (2003) Identification of Lps2 as a key transducer of MyD88-independent TIR signalling. Nature 424: 743-8 PubMed GONUTS page
  24. ↑ Sakurai D et al. (2004) Fc epsilon RI gamma-ITAM is differentially required for mast cell function in vivo. J Immunol 172: 2374-81 PubMed GONUTS page
  25. ↑ Watanabe T et al. (2004) NOD2 is a negative regulator of Toll-like receptor 2-mediated T helper type 1 responses. Nat Immunol 5: 800-8 PubMed GONUTS page
  26. ↑ Allenspach EJ et al. (2001) ERM-dependent movement of CD43 defines a novel protein complex distal to the immunological synapse. Immunity 15: 739-50 PubMed GONUTS page
  27. ↑ Negishi H et al. (2005) Negative regulation of Toll-like-receptor signaling by IRF-4. Proc Natl Acad Sci U S A 102: 15989-94 PubMed GONUTS page
  28. ↑ Kielian T et al. (2005) Toll-like receptor 2 modulates the proinflammatory milieu in Staphylococcus aureus-induced brain abscess. Infect Immun 73: 7428-35 PubMed GONUTS page
  29. ↑ Lin W et al. (2005) Allergic dysregulation and hyperimmunoglobulinemia E in Foxp3 mutant mice. J Allergy Clin Immunol 116: 1106-15 PubMed GONUTS page
  30. ↑ Lee NK et al. (2007) Endocrine regulation of energy metabolism by the skeleton. Cell 130: 456-69 PubMed GONUTS page
  31. ↑ Kim YG et al. (2008) The cytosolic sensors Nod1 and Nod2 are critical for bacterial recognition and host defense after exposure to Toll-like receptor ligands. Immunity 28: 246-57 PubMed GONUTS page
  32. ↑ Dardalhon V et al. (2008) IL-4 inhibits TGF-beta-induced Foxp3+ T cells and, together with TGF-beta, generates IL-9+ IL-10+ Foxp3(-) effector T cells. Nat Immunol 9: 1347-55 PubMed GONUTS page
  33. ↑ De M et al. (1992) Interleukin-1, interleukin-6, and tumor necrosis factor alpha are produced in the mouse uterus during the estrous cycle and are induced by estrogen and progesterone. Dev Biol 151: 297-305 PubMed GONUTS page
  34. ↑ 34.0 34.1 Gan B et al. (2006) Role of FIP200 in cardiac and liver development and its regulation of TNFalpha and TSC-mTOR signaling pathways. J Cell Biol 175: 121-33 PubMed GONUTS page
  35. ↑ Terauchi M et al. (2009) T lymphocytes amplify the anabolic activity of parathyroid hormone through Wnt10b signaling. Cell Metab 10: 229-40 PubMed GONUTS page
  36. ↑ Marchetti L et al. (2004) Tumor necrosis factor (TNF)-mediated neuroprotection against glutamate-induced excitotoxicity is enhanced by N-methyl-D-aspartate receptor activation. Essential role of a TNF receptor 2-mediated phosphatidylinositol 3-kinase-dependent NF-kappa B pathway. J Biol Chem 279: 32869-81 PubMed GONUTS page
  37. ↑ 37.0 37.1 37.2 37.3 Pasparakis M et al. (1996) Immune and inflammatory responses in TNF alpha-deficient mice: a critical requirement for TNF alpha in the formation of primary B cell follicles, follicular dendritic cell networks and germinal centers, and in the maturation of the humoral immune response. J Exp Med 184: 1397-411 PubMed GONUTS page
  38. ↑ 38.0 38.1 Maeda N et al. (2002) Diet-induced insulin resistance in mice lacking adiponectin/ACRP30. Nat Med 8: 731-7 PubMed GONUTS page
  39. ↑ Song L et al. (2007) p85alpha acts as a novel signal transducer for mediation of cellular apoptotic response to UV radiation. Mol Cell Biol 27: 2713-31 PubMed GONUTS page
  40. ↑ 40.0 40.1 40.2 Song H et al. (2010) Mammalian Mst1 and Mst2 kinases play essential roles in organ size control and tumor suppression. Proc Natl Acad Sci U S A 107: 1431-6 PubMed GONUTS page
  41. ↑ Fernandez A et al. (1994) Differential sensitivity of normal and Ha-ras-transformed C3H mouse embryo fibroblasts to tumor necrosis factor: induction of bcl-2, c-myc, and manganese superoxide dismutase in resistant cells. Oncogene 9: 2009-17 PubMed GONUTS page
  42. ↑ 42.0 42.1 Banks TA et al. (1995) Lymphotoxin-alpha-deficient mice. Effects on secondary lymphoid organ development and humoral immune responsiveness. J Immunol 155: 1685-93 PubMed GONUTS page
  43. ↑ Hsu LJ et al. (2005) Cloning and characterization of a small-size peptide Zfra that regulates the cytotoxic function of tumor necrosis factor by interacting with JNK1. Biochem Biophys Res Commun 327: 415-23 PubMed GONUTS page
  44. ↑ Datta SR et al. (2002) Survival factor-mediated BAD phosphorylation raises the mitochondrial threshold for apoptosis. Dev Cell 3: 631-43 PubMed GONUTS page
  45. ↑ Day EB et al. (2011) Structural basis for enabling T-cell receptor diversity within biased virus-specific CD8+ T-cell responses. Proc Natl Acad Sci U S A 108: 9536-41 PubMed GONUTS page
  46. ↑ Katakai T et al. (2004) Lymph node fibroblastic reticular cells construct the stromal reticulum via contact with lymphocytes. J Exp Med 200: 783-95 PubMed GONUTS page
  47. ↑ Chaisson ML et al. (2004) Osteoclast differentiation is impaired in the absence of inhibitor of kappa B kinase alpha. J Biol Chem 279: 54841-8 PubMed GONUTS page
  48. ↑ Hanada R et al. (2009) Central control of fever and female body temperature by RANKL/RANK. Nature 462: 505-9 PubMed GONUTS page
  49. ↑ Pennica D et al. (1985) Cloning and expression in Escherichia coli of the cDNA for murine tumor necrosis factor. Proc Natl Acad Sci U S A 82: 6060-4 PubMed GONUTS page
  50. ↑ Chang NS (2002) The non-ankyrin C terminus of Ikappa Balpha physically interacts with p53 in vivo and dissociates in response to apoptotic stress, hypoxia, DNA damage, and transforming growth factor-beta 1-mediated growth suppression. J Biol Chem 277: 10323-31 PubMed GONUTS page
  51. ↑ Egawa T et al. (2003) Requirement for CARMA1 in antigen receptor-induced NF-kappa B activation and lymphocyte proliferation. Curr Biol 13: 1252-8 PubMed GONUTS page
  52. ↑ 52.0 52.1 52.2 52.3 Shim JH et al. (2005) TAK1, but not TAB1 or TAB2, plays an essential role in multiple signaling pathways in vivo. Genes Dev 19: 2668-81 PubMed GONUTS page
  53. ↑ Tellier E et al. (2006) The shedding activity of ADAM17 is sequestered in lipid rafts. Exp Cell Res 312: 3969-80 PubMed GONUTS page
  54. ↑ Ding ZM et al. (1999) Relative contribution of LFA-1 and Mac-1 to neutrophil adhesion and migration. J Immunol 163: 5029-38 PubMed GONUTS page
  55. ↑ Toraldo G et al. (2003) IL-7 induces bone loss in vivo by induction of receptor activator of nuclear factor kappa B ligand and tumor necrosis factor alpha from T cells. Proc Natl Acad Sci U S A 100: 125-30 PubMed GONUTS page
  56. ↑ Abrantes EF et al. (2003) Identification, structural characterization, and tissue distribution of Tsg-5: a new TNF-stimulated gene. Genes Immun 4: 298-311 PubMed GONUTS page
  57. ↑ Yao D et al. (2007) High glucose increases angiopoietin-2 transcription in microvascular endothelial cells through methylglyoxal modification of mSin3A. J Biol Chem 282: 31038-45 PubMed GONUTS page
  58. ↑ Esteban V et al. (2009) Angiotensin-(1-7) and the g protein-coupled receptor MAS are key players in renal inflammation. PLoS One 4: e5406 PubMed GONUTS page
  59. ↑ Degrandi D et al. (2007) Extensive characterization of IFN-induced GTPases mGBP1 to mGBP10 involved in host defense. J Immunol 179: 7729-40 PubMed GONUTS page
  60. ↑ Fowler JD et al. (2009) Regulated renin release from 3T3-L1 adipocytes. Am J Physiol Endocrinol Metab 296: E1383-91 PubMed GONUTS page
  61. ↑ Young RE et al. (2004) Neutrophil elastase (NE)-deficient mice demonstrate a nonredundant role for NE in neutrophil migration, generation of proinflammatory mediators, and phagocytosis in response to zymosan particles in vivo. J Immunol 172: 4493-502 PubMed GONUTS page
  62. ↑ Hostager BS et al. (2003) Tumor necrosis factor receptor-associated factor 2 (TRAF2)-deficient B lymphocytes reveal novel roles for TRAF2 in CD40 signaling. J Biol Chem 278: 45382-90 PubMed GONUTS page
  63. ↑ Bettelli E et al. (2005) Foxp3 interacts with nuclear factor of activated T cells and NF-kappa B to repress cytokine gene expression and effector functions of T helper cells. Proc Natl Acad Sci U S A 102: 5138-43 PubMed GONUTS page
  64. ↑ 64.0 64.1 64.2 Melnick M et al. (2001) Embryonic mouse submandibular salivary gland morphogenesis and the TNF/TNF-R1 signal transduction pathway. Anat Rec 262: 318-30 PubMed GONUTS page
  65. ↑ Pogribny IP et al. (2010) Difference in expression of hepatic microRNAs miR-29c, miR-34a, miR-155, and miR-200b is associated with strain-specific susceptibility to dietary nonalcoholic steatohepatitis in mice. Lab Invest 90: 1437-46 PubMed GONUTS page
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