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MGI:Syngap1

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Contents

Species (Taxon ID) Mus musculus (house mouse) (taxon:10090)
Gene Name(s) Syngap1 ( synonyms: Syngap )
Protein Name(s) synaptic Ras GTPase activating protein 1 homolog (rat),
External Links
MGI MGI:3039785

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0005096

GTPase activator activity

MGI:MGI:1354194

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0343

F

From MGI

GO:0005096

GTPase activator activity

MGI:MGI:2152098

IEA: Inferred from Electronic Annotation

InterPro:IPR001936

F

From MGI

GO:0005097

Rab GTPase activator activity

MGI:MGI:3037621
PMID:15014045[1]

IDA: Inferred from Direct Assay

F

From MGI

GO:0005515

protein binding

MGI:MGI:3037621
PMID:15014045[1]

IPI: Inferred from Physical Interaction

UniProtKB:O70405

F

From MGI

GO:0005543

phospholipid binding

MGI:MGI:2152098

IEA: Inferred from Electronic Annotation

InterPro:IPR001849

F

From MGI

GO:0005622

intracellular

MGI:MGI:2152098

IEA: Inferred from Electronic Annotation

InterPro:IPR001936
InterPro:IPR008936

C

From MGI

GO:0005622

intracellular

MGI:MGI:3037621
PMID:15014045[1]

IDA: Inferred from Direct Assay

C

From MGI

GO:0005624

membrane fraction

MGI:MGI:3037621
PMID:15014045[1]

IDA: Inferred from Direct Assay

C

From MGI

GO:0005737

cytoplasm

MGI:MGI:4459044

PANTHER:PTHR10194

C

From MGI

GO:0007165

signal transduction

MGI:MGI:2152098

IEA: Inferred from Electronic Annotation

InterPro:IPR008936

P

From MGI

GO:0007265

Ras protein signal transduction

MGI:MGI:3037621
PMID:15014045[1]

IDA: Inferred from Direct Assay

P

From MGI

GO:0007389

pattern specification process

MGI:MGI:3614311
PMID:16452659[2]

IMP: Inferred from Mutant Phenotype

MGI:MGI:3580631

P

From MGI

GO:0008542

visual learning

MGI:MGI:3580530
PMID:12427827[3]

IMP: Inferred from Mutant Phenotype

MGI:MGI:3580631

P

From MGI

GO:0016020

membrane

MGI:MGI:1354194

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0472

C

From MGI

GO:0016358

dendrite development

MGI:MGI:3510474
PMID:15470153[4]

IMP: Inferred from Mutant Phenotype

MGI:MGI:3511175

P

From MGI

GO:0017124

SH3 domain binding

MGI:MGI:1354194

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0729

F

From MGI

GO:0019901

protein kinase binding

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

NCBI:NP_001106880

F

From MGI

GO:0030054

cell junction

MGI:MGI:1354194

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0965

C

From MGI

GO:0031235

intrinsic to internal side of plasma membrane

MGI:MGI:4459044

PANTHER:PTHR10194

C

From MGI

GO:0032320

positive regulation of Ras GTPase activity

MGI:MGI:4459044

PANTHER:PTHR10194

P

From MGI

GO:0032851

positive regulation of Rab GTPase activity

MGI:MGI:3037621
PMID:15014045[1]

IDA: Inferred from Direct Assay

P

From MGI

GO:0043066

negative regulation of apoptotic process

MGI:MGI:3590468
PMID:15733080[5]

IMP: Inferred from Mutant Phenotype

MGI:MGI:3511175

P

From MGI

GO:0043113

receptor clustering

MGI:MGI:3575363
PMID:12598599[6]

IMP: Inferred from Mutant Phenotype

MGI:MGI:3576223

P

From MGI

GO:0043198

dendritic shaft

MGI:MGI:3614311
PMID:16452659[2]

IDA: Inferred from Direct Assay

C

From MGI

GO:0043408

regulation of MAPK cascade

MGI:MGI:3580530
PMID:12427827[3]

IMP: Inferred from Mutant Phenotype

MGI:MGI:3580631

P

From MGI

GO:0045202

synapse

MGI:MGI:1354194

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0770

C

From MGI

GO:0046580

negative regulation of Ras protein signal transduction

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

NCBI:NP_001106880

P

From MGI

GO:0046580

negative regulation of Ras protein signal transduction

MGI:MGI:4459044

PANTHER:PTHR10194

P

From MGI

GO:0048167

regulation of synaptic plasticity

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

NCBI:NP_001106880

P

From MGI

GO:0048169

regulation of long-term neuronal synaptic plasticity

MGI:MGI:3576792
PMID:15781580[7]

IMP: Inferred from Mutant Phenotype

MGI:MGI:3576223

P

From MGI

GO:0048169

regulation of long-term neuronal synaptic plasticity

MGI:MGI:3580530
PMID:12427827[3]

IGI: Inferred from Genetic Interaction

MGI:MGI:1277959

P

From MGI

GO:0048169

regulation of long-term neuronal synaptic plasticity

MGI:MGI:3580530
PMID:12427827[3]

IMP: Inferred from Mutant Phenotype

MGI:MGI:3580631

P

From MGI

GO:0050771

negative regulation of axonogenesis

MGI:MGI:3037621
PMID:15014045[1]

IDA: Inferred from Direct Assay

P

From MGI

GO:0050803

regulation of synapse structure and activity

MGI:MGI:3510474
PMID:15470153[4]

IMP: Inferred from Mutant Phenotype

MGI:MGI:3511175

P

From MGI

GO:0051056

regulation of small GTPase mediated signal transduction

MGI:MGI:2152098

IEA: Inferred from Electronic Annotation

InterPro:IPR001936

P

From MGI


Notes

References

See Help:References for how to manage references in GONUTS.
  1. 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Tomoda T et al. (2004) Role of Unc51.1 and its binding partners in CNS axon outgrowth. Genes Dev 18: 541-58 PubMed GONUTS page
  2. 2.0 2.1 Barnett MW et al. (2006) Synaptic Ras GTPase activating protein regulates pattern formation in the trigeminal system of mice. J Neurosci 26: 1355-65 PubMed GONUTS page
  3. 3.0 3.1 3.2 3.3 Komiyama NH et al. (2002) SynGAP regulates ERK/MAPK signaling, synaptic plasticity, and learning in the complex with postsynaptic density 95 and NMDA receptor. J Neurosci 22: 9721-32 PubMed GONUTS page
  4. 4.0 4.1 Vazquez LE et al. (2004) SynGAP regulates spine formation. J Neurosci 24: 8862-72 PubMed GONUTS page
  5. Knuesel I et al. (2005) A role for synGAP in regulating neuronal apoptosis. Eur J Neurosci 21: 611-21 PubMed GONUTS page
  6. Kim JH et al. (2003) The role of synaptic GTPase-activating protein in neuronal development and synaptic plasticity. J Neurosci 23: 1119-24 PubMed GONUTS page
  7. Turcotte K et al. (2005) A mutation in the Icsbp1 gene causes susceptibility to infection and a chronic myeloid leukemia-like syndrome in BXH-2 mice. J Exp Med 201: 881-90 PubMed GONUTS page
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