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MGI:Hoxd9

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Contents

Species (Taxon ID) Mus musculus (house mouse) (taxon:10090)
Gene Name(s) Hoxd9 ( synonyms: Hox-4.4, Hox-5.2 )
Protein Name(s) homeobox D9,
External Links
MGI MGI:96210

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0003677

DNA binding

MGI:MGI:893284
PMID:1756725[1]

IDA: Inferred from Direct Assay

F

From MGI

GO:0003700

sequence-specific DNA binding transcription factor activity

MGI:MGI:893284
PMID:1756725[1]

IDA: Inferred from Direct Assay

F

From MGI

GO:0005634

nucleus

MGI:MGI:58332
PMID:2568311[2]

IDA: Inferred from Direct Assay

C

From MGI

GO:0006351

transcription, DNA-dependent

MGI:MGI:1354194

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0804

P

From MGI

GO:0006351

transcription, DNA-dependent

MGI:MGI:2152098

IEA: Inferred from Electronic Annotation

InterPro:IPR006711

P

From MGI

GO:0006355

regulation of transcription, DNA-dependent

MGI:MGI:1354194

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0805

P

From MGI

GO:0006355

regulation of transcription, DNA-dependent

MGI:MGI:2152098

IEA: Inferred from Electronic Annotation

InterPro:IPR017970
InterPro:IPR001356

P

From MGI

GO:0007275

multicellular organismal development

MGI:MGI:1354194

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0217

P

From MGI

GO:0007519

skeletal muscle tissue development

MGI:MGI:1350864
PMID:10642795[3]

IGI: Inferred from Genetic Interaction

MGI:MGI:96202

P

From MGI

GO:0008344

adult locomotory behavior

MGI:MGI:1350864
PMID:10642795[3]

IGI: Inferred from Genetic Interaction

MGI:MGI:96202

P

From MGI

GO:0009952

anterior/posterior pattern specification

MGI:MGI:1350864
PMID:10642795[3]

IGI: Inferred from Genetic Interaction

MGI:MGI:96202

P

From MGI

GO:0009952

anterior/posterior pattern specification

MGI:MGI:3720535
PMID:17626057[4]

IGI: Inferred from Genetic Interaction

MGI:MGI:96180
MGI:MGI:96190
MGI:MGI:96199

P

From MGI

GO:0009952

anterior/posterior pattern specification

MGI:MGI:78984
PMID:8625797[5]

IGI: Inferred from Genetic Interaction

MGI:MGI:96180

P

From MGI

GO:0009952

anterior/posterior pattern specification

MGI:MGI:78984
PMID:8625797[5]

IMP: Inferred from Mutant Phenotype

MGI:MGI:2150414

P

From MGI

GO:0009954

proximal/distal pattern formation

MGI:MGI:78984
PMID:8625797[5]

IGI: Inferred from Genetic Interaction

MGI:MGI:96180

P

From MGI

GO:0009954

proximal/distal pattern formation

MGI:MGI:78984
PMID:8625797[5]

IMP: Inferred from Mutant Phenotype

MGI:MGI:2150414

P

From MGI

GO:0030879

mammary gland development

MGI:MGI:1328716
PMID:9892669[6]

IGI: Inferred from Genetic Interaction

MGI:MGI:96180
MGI:MGI:96190

P

From MGI

GO:0035115

embryonic forelimb morphogenesis

MGI:MGI:78984
PMID:8625797[5]

IGI: Inferred from Genetic Interaction

MGI:MGI:96180

P

From MGI

GO:0035115

embryonic forelimb morphogenesis

MGI:MGI:78984
PMID:8625797[5]

IMP: Inferred from Mutant Phenotype

MGI:MGI:2150414

P

From MGI

GO:0035136

forelimb morphogenesis

MGI:MGI:1350864
PMID:10642795[3]

IGI: Inferred from Genetic Interaction

MGI:MGI:96202

P

From MGI

GO:0035137

hindlimb morphogenesis

MGI:MGI:1350864
PMID:10642795[3]

IGI: Inferred from Genetic Interaction

MGI:MGI:96202

P

From MGI

GO:0043565

sequence-specific DNA binding

MGI:MGI:2152098

IEA: Inferred from Electronic Annotation

InterPro:IPR017970
InterPro:IPR001356

F

From MGI

GO:0045944

positive regulation of transcription from RNA polymerase II promoter

MGI:MGI:893284
PMID:1756725[1]

IDA: Inferred from Direct Assay

P

From MGI

GO:0048704

embryonic skeletal system morphogenesis

MGI:MGI:1350864
PMID:10642795[3]

IGI: Inferred from Genetic Interaction

MGI:MGI:96202

P

From MGI

GO:0048706

embryonic skeletal system development

MGI:MGI:3720535
PMID:17626057[4]

IGI: Inferred from Genetic Interaction

MGI:MGI:96180
MGI:MGI:96190
MGI:MGI:96199

P

From MGI

GO:0048706

embryonic skeletal system development

MGI:MGI:78984
PMID:8625797[5]

IGI: Inferred from Genetic Interaction

MGI:MGI:96180

P

From MGI

GO:0048706

embryonic skeletal system development

MGI:MGI:78984
PMID:8625797[5]

IMP: Inferred from Mutant Phenotype

MGI:MGI:2150414

P

From MGI

GO:0048935

peripheral nervous system neuron development

MGI:MGI:1350864
PMID:10642795[3]

IGI: Inferred from Genetic Interaction

MGI:MGI:96202

P

From MGI


Notes

References

See Help:References for how to manage references in GONUTS.
  1. 1.0 1.1 1.2 Zappavigna V et al. (1991) HOX4 genes encode transcription factors with potential auto- and cross-regulatory capacities. EMBO J 10: 4177-87 PubMed GONUTS page
  2. Oliver G et al. (1989) Complementary homeo protein gradients in developing limb buds. Genes Dev 3: 641-50 PubMed GONUTS page
  3. 3.0 3.1 3.2 3.3 3.4 3.5 3.6 de la Cruz CC et al. (1999) Targeted disruption of Hoxd9 and Hoxd10 alters locomotor behavior, vertebral identity, and peripheral nervous system development. Dev Biol 216: 595-610 PubMed GONUTS page
  4. 4.0 4.1 McIntyre DC et al. (2007) Hox patterning of the vertebrate rib cage. Development 134: 2981-9 PubMed GONUTS page
  5. 5.0 5.1 5.2 5.3 5.4 5.5 5.6 5.7 Fromental-Ramain C et al. (1996) Specific and redundant functions of the paralogous Hoxa-9 and Hoxd-9 genes in forelimb and axial skeleton patterning. Development 122: 461-72 PubMed GONUTS page
  6. Chen F & Capecchi MR (1999) Paralogous mouse Hox genes, Hoxa9, Hoxb9, and Hoxd9, function together to control development of the mammary gland in response to pregnancy. Proc Natl Acad Sci U S A 96: 541-6 PubMed GONUTS page
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