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MGI:Hnf4a

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Contents

Species (Taxon ID) Mus musculus (house mouse) (taxon:10090)
Gene Name(s) Hnf4a ( synonyms: HNF-4, Hnf4, HNF4 alpha, MODY1, Nr2a1, Nuclear receptor 2A1, Tcf14, Tcf4 )
Protein Name(s) hepatic nuclear factor 4, alpha,
External Links
MGI MGI:109128

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0000062

fatty-acyl-CoA binding

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P22449

F

From MGI

GO:0001077

RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P22449

F

From MGI

GO:0003677

DNA binding

MGI:MGI:3050203
PMID:15014077[1]

IDA: Inferred from Direct Assay

F

From MGI

GO:0003677

DNA binding

MGI:MGI:3511724
PMID:15581617[2]

IDA: Inferred from Direct Assay

F

From MGI

GO:0003677

DNA binding

MGI:MGI:3654711
PMID:16912278[3]

IDA: Inferred from Direct Assay

F

From MGI

GO:0003677

DNA binding

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P22449

F

From MGI

GO:0003677

DNA binding

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P41235

F

From MGI

GO:0003677

DNA binding

MGI:MGI:75752
PMID:7615825[4]

ISO: Inferred from Sequence Orthology

UniProtKB:P41235

F

From MGI

GO:0003700

sequence-specific DNA binding transcription factor activity

MGI:MGI:3575336
PMID:15761495[5]

IDA: Inferred from Direct Assay

F

From MGI

GO:0003700

sequence-specific DNA binding transcription factor activity

MGI:MGI:3619855
PMID:16498401[6]

IDA: Inferred from Direct Assay

F

From MGI

GO:0003700

sequence-specific DNA binding transcription factor activity

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P22449

F

From MGI

GO:0003700

sequence-specific DNA binding transcription factor activity

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P41235

F

From MGI

GO:0003700

sequence-specific DNA binding transcription factor activity

MGI:MGI:75752
PMID:7615825[4]

ISO: Inferred from Sequence Orthology

UniProtKB:P41235

F

From MGI

GO:0003705

RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity

MGI:MGI:1888589
PMID:10859308[7]

IDA: Inferred from Direct Assay

F

From MGI

GO:0003707

steroid hormone receptor activity

MGI:MGI:2152098

IEA: Inferred from Electronic Annotation

InterPro:IPR008946
InterPro:IPR000536
InterPro:IPR001723

F

From MGI

GO:0004872

receptor activity

MGI:MGI:1354194

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0675

F

From MGI

GO:0004879

ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity

MGI:MGI:2152098

IEA: Inferred from Electronic Annotation

InterPro:IPR003068

F

From MGI

GO:0005102

receptor binding

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P41235

F

From MGI

GO:0005504

fatty acid binding

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P22449

F

From MGI

GO:0005504

fatty acid binding

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P41235

F

From MGI

GO:0005515

protein binding

MGI:MGI:3760208
PMID:17636037[8]

IPI: Inferred from Physical Interaction

UniProtKB:Q9WTN3

F

From MGI

GO:0005634

nucleus

MGI:MGI:1101555
PMID:9408084[9]

IDA: Inferred from Direct Assay

C

From MGI

GO:0005634

nucleus

MGI:MGI:1195513
PMID:9421506[10]

IDA: Inferred from Direct Assay

C

From MGI

GO:0005634

nucleus

MGI:MGI:2154458

ISO: Inferred from Sequence Orthology

UniProtKB:P41235

C

From MGI

GO:0005634

nucleus

MGI:MGI:3575862
PMID:15767668[11]

IDA: Inferred from Direct Assay

C

From MGI

GO:0005634

nucleus

MGI:MGI:3619787
PMID:16537911[12]

IDA: Inferred from Direct Assay

C

From MGI

GO:0005634

nucleus

MGI:MGI:3688957
PMID:17021047[13]

IDA: Inferred from Direct Assay

C

From MGI

GO:0005634

nucleus

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P22449

C

From MGI

GO:0005634

nucleus

MGI:MGI:64328
PMID:8306889[14]

IDA: Inferred from Direct Assay

C

From MGI

GO:0005634

nucleus

MGI:MGI:75752
PMID:7615825[4]

ISO: Inferred from Sequence Orthology

UniProtKB:P41235

C

From MGI

GO:0005667

transcription factor complex

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P22449

C

From MGI

GO:0005737

cytoplasm

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P22449

C

From MGI

GO:0005737

cytoplasm

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P41235

C

From MGI

GO:0006351

transcription, DNA-dependent

MGI:MGI:1354194

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0804

P

From MGI

GO:0006355

regulation of transcription, DNA-dependent

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P22449

P

From MGI

GO:0006355

regulation of transcription, DNA-dependent

MGI:MGI:85762
PMID:9053305[15]

IMP: Inferred from Mutant Phenotype

MGI:MGI:2158682

P

From MGI

GO:0006357

regulation of transcription from RNA polymerase II promoter

MGI:MGI:2152098

IEA: Inferred from Electronic Annotation

InterPro:IPR003068

P

From MGI

GO:0006357

regulation of transcription from RNA polymerase II promoter

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P41235

P

From MGI

GO:0006591

ornithine metabolic process

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P41235

P

From MGI

GO:0006629

lipid metabolic process

MGI:MGI:3619855
PMID:16498401[6]

IMP: Inferred from Mutant Phenotype

MGI:MGI:3622274

P

From MGI

GO:0006637

acyl-CoA metabolic process

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P22449

P

From MGI

GO:0006805

xenobiotic metabolic process

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P41235

P

From MGI

GO:0007164

establishment of tissue polarity

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P22449

P

From MGI

GO:0007548

sex differentiation

MGI:MGI:3769852
PMID:17412818[16]

IMP: Inferred from Mutant Phenotype

MGI:MGI:2183520

P

From MGI

GO:0007596

blood coagulation

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P41235

P

From MGI

GO:0008134

transcription factor binding

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P22449

F

From MGI

GO:0008270

zinc ion binding

MGI:MGI:2152098

IEA: Inferred from Electronic Annotation

InterPro:IPR001628
InterPro:IPR013088

F

From MGI

GO:0008285

negative regulation of cell proliferation

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P22449

P

From MGI

GO:0008285

negative regulation of cell proliferation

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P41235

P

From MGI

GO:0009749

response to glucose stimulus

MGI:MGI:3575336
PMID:15761495[5]

IMP: Inferred from Mutant Phenotype

P

From MGI

GO:0009749

response to glucose stimulus

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P22449

P

From MGI

GO:0010470

regulation of gastrulation

MGI:MGI:69170
PMID:7958910[17]

IMP: Inferred from Mutant Phenotype

MGI:MGI:2158682

P

From MGI

GO:0016290

palmitoyl-CoA hydrolase activity

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P22449

F

From MGI

GO:0019216

regulation of lipid metabolic process

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P41235

P

From MGI

GO:0023019

signal transduction involved in regulation of gene expression

MGI:MGI:4415813
PMID:18462699[18]

IDA: Inferred from Direct Assay

P

From MGI

GO:0030154

cell differentiation

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P22449

P

From MGI

GO:0030308

negative regulation of cell growth

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P41235

P

From MGI

GO:0032534

regulation of microvillus assembly

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P22449

P

From MGI

GO:0033159

negative regulation of protein import into nucleus, translocation

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P22449

P

From MGI

GO:0033613

activating transcription factor binding

MGI:MGI:3813432
PMID:17932483[19]

IPI: Inferred from Physical Interaction

UniProtKB:O35740

F

From MGI

GO:0042524

negative regulation of tyrosine phosphorylation of Stat5 protein

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P22449

P

From MGI

GO:0042593

glucose homeostasis

MGI:MGI:3575336
PMID:15761495[5]

IMP: Inferred from Mutant Phenotype

P

From MGI

GO:0042803

protein homodimerization activity

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P22449

F

From MGI

GO:0042803

protein homodimerization activity

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P41235

F

From MGI

GO:0043401

steroid hormone mediated signaling pathway

MGI:MGI:2152098

IEA: Inferred from Electronic Annotation

InterPro:IPR008946
InterPro:IPR000536

P

From MGI

GO:0043433

negative regulation of sequence-specific DNA binding transcription factor activity

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P22449

P

From MGI

GO:0043565

sequence-specific DNA binding

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P22449

F

From MGI

GO:0043565

sequence-specific DNA binding

MGI:MGI:64328
PMID:8306889[14]

IDA: Inferred from Direct Assay

F

From MGI

GO:0044212

transcription regulatory region DNA binding

MGI:MGI:3575336
PMID:15761495[5]

IDA: Inferred from Direct Assay

F

From MGI

GO:0044212

transcription regulatory region DNA binding

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P41235

F

From MGI

GO:0045216

cell-cell junction organization

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P22449

P

From MGI

GO:0045722

positive regulation of gluconeogenesis

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P22449

P

From MGI

GO:0045723

positive regulation of fatty acid biosynthetic process

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P22449

P

From MGI

GO:0045893

positive regulation of transcription, DNA-dependent

MGI:MGI:1101555
PMID:9408084[9]

IDA: Inferred from Direct Assay

P

From MGI

GO:0045893

positive regulation of transcription, DNA-dependent

MGI:MGI:1195513
PMID:9421506[10]

IDA: Inferred from Direct Assay

P

From MGI

GO:0045893

positive regulation of transcription, DNA-dependent

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P22449

P

From MGI

GO:0045893

positive regulation of transcription, DNA-dependent

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P41235

P

From MGI

GO:0045930

negative regulation of mitotic cell cycle

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P22449

P

From MGI

GO:0045944

positive regulation of transcription from RNA polymerase II promoter

MGI:MGI:1888589
PMID:10859308[7]

IDA: Inferred from Direct Assay

P

From MGI

GO:0045944

positive regulation of transcription from RNA polymerase II promoter

MGI:MGI:1930468
PMID:11158324[20]

IMP: Inferred from Mutant Phenotype

P

From MGI

GO:0045944

positive regulation of transcription from RNA polymerase II promoter

MGI:MGI:3511724
PMID:15581617[2]

IDA: Inferred from Direct Assay

P

From MGI

GO:0045944

positive regulation of transcription from RNA polymerase II promoter

MGI:MGI:3575336
PMID:15761495[5]

IDA: Inferred from Direct Assay

P

From MGI

GO:0045944

positive regulation of transcription from RNA polymerase II promoter

MGI:MGI:3619787
PMID:16537911[12]

IMP: Inferred from Mutant Phenotype

MGI:MGI:3622274

P

From MGI

GO:0045944

positive regulation of transcription from RNA polymerase II promoter

MGI:MGI:3624152
PMID:16527247[21]

IDA: Inferred from Direct Assay

P

From MGI

GO:0045944

positive regulation of transcription from RNA polymerase II promoter

MGI:MGI:3760208
PMID:17636037[8]

IDA: Inferred from Direct Assay

P

From MGI

GO:0045944

positive regulation of transcription from RNA polymerase II promoter

MGI:MGI:3760208
PMID:17636037[8]

IGI: Inferred from Genetic Interaction

MGI:MGI:1276523
MGI:MGI:1276533
MGI:MGI:1276535

P

From MGI

GO:0045944

positive regulation of transcription from RNA polymerase II promoter

MGI:MGI:3760208
PMID:17636037[8]

IGI: Inferred from Genetic Interaction

MGI:MGI:1342774

P

From MGI

GO:0045944

positive regulation of transcription from RNA polymerase II promoter

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P22449

P

From MGI

GO:0045944

positive regulation of transcription from RNA polymerase II promoter

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P41235

P

From MGI

GO:0045944

positive regulation of transcription from RNA polymerase II promoter

MGI:MGI:75752
PMID:7615825[4]

ISO: Inferred from Sequence Orthology

UniProtKB:P41235

P

From MGI

GO:0046872

metal ion binding

MGI:MGI:1354194

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0479

F

From MGI

GO:0050732

negative regulation of peptidyl-tyrosine phosphorylation

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P22449

P

From MGI

GO:0050796

regulation of insulin secretion

MGI:MGI:3575336
PMID:15761495[5]

IMP: Inferred from Mutant Phenotype

P

From MGI

GO:0055088

lipid homeostasis

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:P41235

P

From MGI

GO:0055091

phospholipid homeostasis

MGI:MGI:1930468
PMID:11158324[20]

IMP: Inferred from Mutant Phenotype

P

From MGI

GO:0060395

SMAD protein signal transduction

MGI:MGI:1195384
PMID:9420335[22]

IDA: Inferred from Direct Assay

P

From MGI

GO:0070328

triglyceride homeostasis

MGI:MGI:1930468
PMID:11158324[20]

IMP: Inferred from Mutant Phenotype

P

From MGI

GO:0070491

repressing transcription factor binding

MGI:MGI:4417868

ISO: Inferred from Sequence Orthology

UniProtKB:P22449

F

From MGI

GO:2000189

positive regulation of cholesterol homeostasis

MGI:MGI:1930468
PMID:11158324[20]

IMP: Inferred from Mutant Phenotype

P

From MGI


Notes

References

See Help:References for how to manage references in GONUTS.
  1. Paré JF et al. (2004) The fetoprotein transcription factor (FTF) gene is essential to embryogenesis and cholesterol homeostasis and is regulated by a DR4 element. J Biol Chem 279: 21206-16 PubMed GONUTS page
  2. 2.0 2.1 Kamiya A et al. (2004) Hepatocyte nuclear factors 1alpha and 4alpha control expression of proline oxidase in adult liver. FEBS Lett 578: 63-8 PubMed GONUTS page
  3. Kyrmizi I et al. (2006) Plasticity and expanding complexity of the hepatic transcription factor network during liver development. Genes Dev 20: 2293-305 PubMed GONUTS page
  4. 4.0 4.1 4.2 4.3 Ginsburg GS et al. (1995) Intestinal apolipoprotein AI gene transcription is regulated by multiple distinct DNA elements and is synergistically activated by the orphan nuclear receptor, hepatocyte nuclear factor 4. J Clin Invest 96: 528-38 PubMed GONUTS page
  5. 5.0 5.1 5.2 5.3 5.4 5.5 Gupta RK et al. (2005) The MODY1 gene HNF-4alpha regulates selected genes involved in insulin secretion. J Clin Invest 115: 1006-15 PubMed GONUTS page
  6. 6.0 6.1 Briançon N & Weiss MC (2006) In vivo role of the HNF4alpha AF-1 activation domain revealed by exon swapping. EMBO J 25: 1253-62 PubMed GONUTS page
  7. 7.0 7.1 Antes TJ et al. (2000) Identification and characterization of a 315-base pair enhancer, located more than 55 kilobases 5' of the apolipoprotein B gene, that confers expression in the intestine. J Biol Chem 275: 26637-48 PubMed GONUTS page
  8. 8.0 8.1 8.2 8.3 Ponugoti B et al. (2007) Functional interaction of hepatic nuclear factor-4 and peroxisome proliferator-activated receptor-gamma coactivator 1alpha in CYP7A1 regulation is inhibited by a key lipogenic activator, sterol regulatory element-binding protein-1c. Mol Endocrinol 21: 2698-712 PubMed GONUTS page
  9. 9.0 9.1 Yokomori N et al. (1997) Transcriptional regulation by HNF-4 of the steroid 15alpha-hydroxylase P450 (Cyp2a-4) gene in mouse liver. J Steroid Biochem Mol Biol 62: 307-14 PubMed GONUTS page
  10. 10.0 10.1 Nakhei H et al. (1998) An alternative splice variant of the tissue specific transcription factor HNF4alpha predominates in undifferentiated murine cell types. Nucleic Acids Res 26: 497-504 PubMed GONUTS page
  11. Zhao R et al. (2005) GATA6 is essential for embryonic development of the liver but dispensable for early heart formation. Mol Cell Biol 25: 2622-31 PubMed GONUTS page
  12. 12.0 12.1 Sadagurski M et al. (2006) Insulin-like growth factor 1 receptor signaling regulates skin development and inhibits skin keratinocyte differentiation. Mol Cell Biol 26: 2675-87 PubMed GONUTS page
  13. Yamasaki H et al. (2006) Suppression of C/EBPalpha expression in periportal hepatoblasts may stimulate biliary cell differentiation through increased Hnf6 and Hnf1b expression. Development 133: 4233-43 PubMed GONUTS page
  14. 14.0 14.1 Ang SL et al. (1993) The formation and maintenance of the definitive endoderm lineage in the mouse: involvement of HNF3/forkhead proteins. Development 119: 1301-15 PubMed GONUTS page
  15. Duncan SA et al. (1997) Murine gastrulation requires HNF-4 regulated gene expression in the visceral endoderm: tetraploid rescue of Hnf-4(-/-) embryos. Development 124: 279-87 PubMed GONUTS page
  16. Laz EV et al. (2007) Characterization of three growth hormone-responsive transcription factors preferentially expressed in adult female liver. Endocrinology 148: 3327-37 PubMed GONUTS page
  17. Chen WS et al. (1994) Disruption of the HNF-4 gene, expressed in visceral endoderm, leads to cell death in embryonic ectoderm and impaired gastrulation of mouse embryos. Genes Dev 8: 2466-77 PubMed GONUTS page
  18. Lee D et al. (2008) ER71 acts downstream of BMP, Notch, and Wnt signaling in blood and vessel progenitor specification. Cell Stem Cell 2: 497-507 PubMed GONUTS page
  19. Qu X et al. (2007) Cited2, a coactivator of HNF4alpha, is essential for liver development. EMBO J 26: 4445-56 PubMed GONUTS page
  20. 20.0 20.1 20.2 20.3 Hayhurst GP et al. (2001) Hepatocyte nuclear factor 4alpha (nuclear receptor 2A1) is essential for maintenance of hepatic gene expression and lipid homeostasis. Mol Cell Biol 21: 1393-403 PubMed GONUTS page
  21. Furihata T et al. (2006) Hepatocyte nuclear factor-4alpha plays pivotal roles in the regulation of mouse carboxylesterase 2 gene transcription in mouse liver. Arch Biochem Biophys 447: 107-17 PubMed GONUTS page
  22. Sirard C et al. (1998) The tumor suppressor gene Smad4/Dpc4 is required for gastrulation and later for anterior development of the mouse embryo. Genes Dev 12: 107-19 PubMed GONUTS page
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