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MGI:Csda
Contents |
| Species (Taxon ID) | Mus musculus (house mouse) (taxon:10090) | |
| Gene Name(s) | Csda ( synonyms: dbpA, Dpba, MSY3, MSY4, oxyR, Yb2, Ybx3 ) | |
| Protein Name(s) | cold shock domain protein A, | |
| External Links | ||
| MGI | MGI:2137670 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0000122 |
negative regulation of transcription from RNA polymerase II promoter |
MGI:MGI:4417868 |
ISO: Inferred from Sequence Orthology |
P |
From MGI |
|||
| GO:0001701 |
in utero embryonic development |
MGI:MGI:3692516 |
IGI: Inferred from Genetic Interaction |
MGI:MGI:99146 |
P |
From MGI |
||
| GO:0003676 |
nucleic acid binding |
MGI:MGI:2152098 |
IEA: Inferred from Electronic Annotation |
F |
From MGI |
|||
| GO:0003677 |
DNA binding |
MGI:MGI:2446378 |
IDA: Inferred from Direct Assay |
F |
From MGI |
|||
| GO:0003697 |
single-stranded DNA binding |
MGI:MGI:3808638 |
IDA: Inferred from Direct Assay |
F |
From MGI |
|||
| GO:0003697 |
single-stranded DNA binding |
MGI:MGI:3808638 |
IDA: Inferred from Direct Assay |
F |
From MGI |
|||
| GO:0003697 |
single-stranded DNA binding |
MGI:MGI:4417868 |
ISO: Inferred from Sequence Orthology |
F |
From MGI |
|||
| GO:0003723 |
RNA binding |
MGI:MGI:1354194 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0694 |
F |
From MGI |
||
| GO:0003730 |
mRNA 3'-UTR binding |
MGI:MGI:1930944 |
IDA: Inferred from Direct Assay |
F |
From MGI |
|||
| GO:0005515 |
protein binding |
MGI:MGI:3609918 |
IPI: Inferred from Physical Interaction |
F |
From MGI |
|||
| GO:0005634 |
nucleus |
MGI:MGI:2446378 |
IDA: Inferred from Direct Assay |
C |
From MGI |
|||
| GO:0005634 |
nucleus |
MGI:MGI:4417868 |
ISO: Inferred from Sequence Orthology |
C |
From MGI |
|||
| GO:0005737 |
cytoplasm |
MGI:MGI:1930944 |
IDA: Inferred from Direct Assay |
C |
From MGI |
|||
| GO:0005737 |
cytoplasm |
MGI:MGI:4834177 |
ISO: Inferred from Sequence Orthology |
C |
From MGI |
|||
| GO:0005921 |
gap junction |
MGI:MGI:3625211 |
ISO: Inferred from Sequence Orthology |
C |
From MGI |
|||
| GO:0006351 |
transcription, DNA-dependent |
MGI:MGI:1354194 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0804 |
P |
From MGI |
||
| GO:0006355 |
regulation of transcription, DNA-dependent |
MGI:MGI:1354194 |
IEA: Inferred from Electronic Annotation |
UniProtKB-KW:KW-0805 |
P |
From MGI |
||
| GO:0006355 |
regulation of transcription, DNA-dependent |
MGI:MGI:2152098 |
IEA: Inferred from Electronic Annotation |
P |
From MGI |
|||
| GO:0007283 |
spermatogenesis |
MGI:MGI:3692516 |
IMP: Inferred from Mutant Phenotype |
MGI:MGI:3693011 |
P |
From MGI |
||
| GO:0008584 |
male gonad development |
MGI:MGI:3692516 |
IMP: Inferred from Mutant Phenotype |
MGI:MGI:3693011 |
P |
From MGI |
||
| GO:0009566 |
fertilization |
MGI:MGI:3692516 |
IMP: Inferred from Mutant Phenotype |
MGI:MGI:3693011 |
P |
From MGI |
||
| GO:0043066 |
negative regulation of apoptotic process |
MGI:MGI:3692516 |
IMP: Inferred from Mutant Phenotype |
MGI:MGI:3693011 |
P |
From MGI |
||
| GO:0046622 |
positive regulation of organ growth |
MGI:MGI:3692516 |
IMP: Inferred from Mutant Phenotype |
MGI:MGI:3693011 |
P |
From MGI |
||
| GO:0048642 |
negative regulation of skeletal muscle tissue development |
MGI:MGI:3808638 |
IDA: Inferred from Direct Assay |
P |
From MGI |
|||
|
colocalizes_with |
GO:0005844 |
polysome |
MGI:MGI:2182517 |
IDA: Inferred from Direct Assay |
C |
From MGI |
||
|
colocalizes_with |
GO:0030529 |
ribonucleoprotein complex |
MGI:MGI:1930944 |
IDA: Inferred from Direct Assay |
C |
From MGI |
| |
| edit table |
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Lu ZH et al. (2006) Cold shock domain family members YB-1 and MSY4 share essential functions during murine embryogenesis. Mol Cell Biol 26: 8410-7 PubMed GONUTS page
- ↑ 2.0 2.1 Coles LS et al. (2002) A novel mechanism of repression of the vascular endothelial growth factor promoter, by single strand DNA binding cold shock domain (Y-box) proteins in normoxic fibroblasts. Nucleic Acids Res 30: 4845-54 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 Berghella L et al. (2008) A highly conserved molecular switch binds MSY-3 to regulate myogenin repression in postnatal muscle. Genes Dev 22: 2125-38 PubMed GONUTS page
- ↑ 4.0 4.1 4.2 Davies HG et al. (2000) A sequence-specific RNA binding complex expressed in murine germ cells contains MSY2 and MSY4. Dev Biol 221: 87-100 PubMed GONUTS page
- ↑ Suzuki H et al. (2001) Protein-protein interaction panel using mouse full-length cDNAs. Genome Res 11: 1758-65 PubMed GONUTS page
- ↑ Ciolofan C et al. (2006) Association of connexin36 and zonula occludens-1 with zonula occludens-2 and the transcription factor zonula occludens-1-associated nucleic acid-binding protein at neuronal gap junctions in rodent retina. Neuroscience 140: 433-51 PubMed GONUTS page
- ↑ Giorgini F et al. (2002) Translational repression by MSY4 inhibits spermatid differentiation in mice. Development 129: 3669-79 PubMed GONUTS page
