Ambox notice.png

GONUTS is under stress! The website is currently experiencing long-wait times and frequent time-outs due to the record number of students, groups, and annotations related to CACAO this semester. We are currently working on increasing performance -- please accept our apologies for the technical difficulties.

You can help reduce stress on the server by:

  1. not reloading pages frequently - this just adds
  2. opening links in new windows (so you can read the old page)

MGI:Alyref

From GONUTS
Jump to: navigation, search

Contents

Species (Taxon ID) Mus musculus (house mouse) (taxon:10090)
Gene Name(s) Alyref ( synonyms: REF1, Refbp1, Thoc4 )
Protein Name(s) Aly/REF export factor,
External Links
MGI MGI:1341044

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0000166

nucleotide binding

MGI:MGI:2152098

IEA: Inferred from Electronic Annotation

InterPro:IPR012677

F

From MGI

GO:0000346

transcription export complex

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:Q86V81

C

From MGI

GO:0003676

nucleic acid binding

MGI:MGI:2152098

IEA: Inferred from Electronic Annotation

InterPro:IPR000504

F

From MGI

GO:0003697

single-stranded DNA binding

MGI:MGI:1913121
PMID:10786854[1]

IDA: Inferred from Direct Assay

F

From MGI

GO:0003723

RNA binding

MGI:MGI:1913121
PMID:10786854[1]

IDA: Inferred from Direct Assay

F

From MGI

GO:0005634

nucleus

MGI:MGI:1913121
PMID:10786854[1]

TAS: Traceable Author Statement

C

From MGI

GO:0005634

nucleus

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:E9PB61

C

From MGI

GO:0005681

spliceosomal complex

MGI:MGI:1354194

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0747

C

From MGI

GO:0005737

cytoplasm

MGI:MGI:1354194

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0963

C

From MGI

GO:0006397

mRNA processing

MGI:MGI:1354194

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0507

P

From MGI

GO:0006406

mRNA export from nucleus

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:Q86V81

P

From MGI

GO:0006810

transport

MGI:MGI:1354194

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0813

P

From MGI

GO:0008380

RNA splicing

MGI:MGI:1354194

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0508

P

From MGI

GO:0046784

intronless viral mRNA export from host nucleus

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:Q86V81

P

From MGI

GO:0051028

mRNA transport

MGI:MGI:1354194

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0509

P

From MGI

GO:0071013

catalytic step 2 spliceosome

MGI:MGI:4834177

ISO: Inferred from Sequence Orthology

UniProtKB:Q86V81

C

From MGI


Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 Stutz F et al. (2000) REF, an evolutionary conserved family of hnRNP-like proteins, interacts with TAP/Mex67p and participates in mRNA nuclear export. RNA 6: 638-50 PubMed GONUTS page


{{{LINEAGE}}}

Personal tools
Namespaces
Variants
Actions
Navigation
Cacao
Journal Clubs
page contributors
Toolbox