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HUMAN:VDR
Contents |
| Species (Taxon ID) | Homo sapiens (Human). ([1]) | |
| Gene Name(s) | VDR (synonyms: NR1I1) | |
| Protein Name(s) | Vitamin D3 receptor
VDR 1,25-dihydroxyvitamin D3 receptor Nuclear receptor subfamily 1 group I member 1 | |
| External Links | ||
| EMBL | J03258 X67482 AF026260 AB002168 AY342401 AK312267 CH471111 BC060832 M65208 AY827087 | |
| IPI | IPI00005716 | |
| PIR | A28200 | |
| RefSeq | NP_000367.1 NP_001017535.1 NP_001017536.1 | |
| UniGene | Hs.524368 | |
| PDB | 1DB1 1IE8 1IE9 1KB2 1KB4 1KB6 1S0Z 1S19 1TXI 1YNW 2HAM 2HAR 2HAS 2HB7 2HB8 3A2I 3A2J 3A3Z 3A40 3A78 3AUQ 3AUR 3B0T 3CS4 3CS6 3M7R 3OGT 3P8X | |
| PDBsum | 1DB1 1IE8 1IE9 1KB2 1KB4 1KB6 1S0Z 1S19 1TXI 1YNW 2HAM 2HAR 2HAS 2HB7 2HB8 3A2I 3A2J 3A3Z 3A40 3A78 3AUQ 3AUR 3B0T 3CS4 3CS6 3M7R 3OGT 3P8X | |
| ProteinModelPortal | P11473 | |
| SMR | P11473 | |
| DisProt | DP00184 | |
| IntAct | P11473 | |
| MINT | MINT-236408 | |
| STRING | P11473 | |
| PhosphoSite | P11473 | |
| PRIDE | P11473 | |
| Ensembl | ENST00000229022 ENST00000395324 | |
| GeneID | 7421 | |
| KEGG | hsa:7421 | |
| UCSC | uc001rqm.1 | |
| CTD | 7421 | |
| GeneCards | GC12M045266 | |
| H-InvDB | HIX0010581 | |
| HGNC | HGNC:12679 | |
| HPA | CAB004617 | |
| MIM | 277440 601769 607948 | |
| neXtProt | NX_P11473 | |
| Orphanet | 93160 437 | |
| PharmGKB | PA37301 | |
| eggNOG | prNOG11938 | |
| HOGENOM | HBG713785 | |
| HOVERGEN | HBG108655 | |
| InParanoid | P11473 | |
| OMA | KDSLRPK | |
| OrthoDB | EOG4J6RR1 | |
| PhylomeDB | P11473 | |
| Pathway_Interaction_DB | smad2_3nuclearpathway retinoic_acid_pathway rxr_vdr_pathway | |
| Reactome | REACT_71 | |
| DrugBank | DB00146 DB02300 DB00136 DB01070 DB00153 DB00910 | |
| NextBio | 29054 | |
| ArrayExpress | P11473 | |
| Bgee | P11473 | |
| CleanEx | HS_VDR | |
| Genevestigator | P11473 | |
| GermOnline | ENSG00000111424 | |
| GO | GO:0005654 GO:0046965 GO:0003700 GO:0003707 GO:0008434 GO:0008270 GO:0046697 GO:0008285 GO:0000122 GO:0010980 GO:0060558 GO:0034339 | |
| InterPro | IPR008946 IPR000536 IPR001723 IPR000324 IPR001628 IPR013088 | |
| Gene3D | G3DSA:1.10.565.10 G3DSA:3.30.50.10 | |
| KO | K08539 | |
| Pfam | PF00104 PF00105 | |
| PRINTS | PR00398 PR00047 PR00350 | |
| SMART | SM00430 SM00399 | |
| SUPFAM | SSF48508 | |
| PROSITE | PS00031 PS51030 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0000122 |
negative regulation of transcription from RNA polymerase II promoter |
IDA: Inferred from Direct Assay |
|
P |
Seeded From UniProt |
|||
| GO:0000902 |
cell morphogenesis |
IMP: Inferred from Mutant Phenotype |
|
P |
Seeded From UniProt |
|||
| GO:0001501 |
skeletal system development |
IEA: Inferred from Electronic Annotation |
Ensembl:ENSMUSP00000023119 |
P |
Seeded From UniProt |
|||
| GO:0003677 |
DNA binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0003677 |
DNA binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0003677 |
DNA binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0003677 |
DNA binding |
IEA: Inferred from Electronic Annotation |
Ensembl:ENSMUSP00000023119 |
F |
Seeded From UniProt |
|||
| GO:0003677 |
DNA binding |
IDA: Inferred from Direct Assay |
|
F |
Seeded From UniProt |
|||
| GO:0003677 |
DNA binding |
TAS: Traceable Author Statement |
|
F |
Seeded From UniProt |
|||
| GO:0003700 |
sequence-specific DNA binding transcription factor activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0003700 |
sequence-specific DNA binding transcription factor activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0003700 |
sequence-specific DNA binding transcription factor activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0003707 |
steroid hormone receptor activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0003707 |
steroid hormone receptor activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0003707 |
steroid hormone receptor activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0004872 |
receptor activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0004879 |
ligand-dependent nuclear receptor activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0004879 |
ligand-dependent nuclear receptor activity |
IEA: Inferred from Electronic Annotation |
Ensembl:ENSMUSP00000023119 |
F |
Seeded From UniProt |
|||
| GO:0005499 |
vitamin D binding |
IEA: Inferred from Electronic Annotation |
Ensembl:ENSRNOP00000011601 |
F |
Seeded From UniProt |
|||
| GO:0005515 |
protein binding |
IPI: Inferred from Physical Interaction |
F |
Seeded From UniProt |
||||
| GO:0005515 |
protein binding |
IPI: Inferred from Physical Interaction |
F |
Seeded From UniProt |
||||
| GO:0005515 |
protein binding |
IPI: Inferred from Physical Interaction |
F |
Seeded From UniProt |
||||
| GO:0005515 |
protein binding |
IPI: Inferred from Physical Interaction |
F |
Seeded From UniProt |
||||
| GO:0005515 |
protein binding |
IPI: Inferred from Physical Interaction |
F |
Seeded From UniProt |
||||
| GO:0005515 |
protein binding |
IPI: Inferred from Physical Interaction |
F |
Seeded From UniProt |
||||
| GO:0005515 |
protein binding |
IPI: Inferred from Physical Interaction |
F |
Seeded From UniProt |
||||
| GO:0005515 |
protein binding |
IPI: Inferred from Physical Interaction |
F |
Seeded From UniProt |
||||
| GO:0005515 |
protein binding |
IPI: Inferred from Physical Interaction |
F |
Seeded From UniProt |
||||
| GO:0005515 |
protein binding |
IPI: Inferred from Physical Interaction |
F |
Seeded From UniProt |
||||
| GO:0005634 |
nucleus |
IEA: Inferred from Electronic Annotation |
C |
Seeded From UniProt |
||||
| GO:0005634 |
nucleus |
IEA: Inferred from Electronic Annotation |
C |
Seeded From UniProt |
||||
| GO:0005634 |
nucleus |
IEA: Inferred from Electronic Annotation |
C |
Seeded From UniProt |
||||
| GO:0005634 |
nucleus |
IEA: Inferred from Electronic Annotation |
C |
Seeded From UniProt |
||||
| GO:0005634 |
nucleus |
IEA: Inferred from Electronic Annotation |
C |
Seeded From UniProt |
||||
| GO:0005634 |
nucleus |
IEA: Inferred from Electronic Annotation |
C |
Seeded From UniProt |
||||
| GO:0005634 |
nucleus |
IEA: Inferred from Electronic Annotation |
SP_SL:SL-0191 |
C |
Seeded From UniProt |
|||
| GO:0005634 |
nucleus |
IDA: Inferred from Direct Assay |
|
C |
Seeded From UniProt |
|||
| GO:0005634 |
nucleus |
IDA: Inferred from Direct Assay |
|
C |
Seeded From UniProt |
|||
| GO:0005654 |
nucleoplasm |
Reactome:REACT_19207 |
TAS: Traceable Author Statement |
|
C |
Seeded From UniProt |
||
| GO:0005720 |
nuclear heterochromatin |
IEA: Inferred from Electronic Annotation |
Ensembl:ENSRNOP00000011601 |
C |
Seeded From UniProt |
|||
| GO:0005792 |
microsome |
IEA: Inferred from Electronic Annotation |
Ensembl:ENSRNOP00000011601 |
C |
Seeded From UniProt |
|||
| GO:0005829 |
cytosol |
IEA: Inferred from Electronic Annotation |
Ensembl:ENSRNOP00000011601 |
C |
Seeded From UniProt |
|||
| GO:0006351 |
transcription, DNA-dependent |
IEA: Inferred from Electronic Annotation |
P |
Seeded From UniProt |
||||
| GO:0006355 |
regulation of transcription, DNA-dependent |
IEA: Inferred from Electronic Annotation |
P |
Seeded From UniProt |
||||
| GO:0006355 |
regulation of transcription, DNA-dependent |
IEA: Inferred from Electronic Annotation |
P |
Seeded From UniProt |
||||
| GO:0006355 |
regulation of transcription, DNA-dependent |
IEA: Inferred from Electronic Annotation |
P |
Seeded From UniProt |
||||
| GO:0006355 |
regulation of transcription, DNA-dependent |
IEA: Inferred from Electronic Annotation |
P |
Seeded From UniProt |
||||
| GO:0006355 |
regulation of transcription, DNA-dependent |
IEA: Inferred from Electronic Annotation |
P |
Seeded From UniProt |
||||
| GO:0006355 |
regulation of transcription, DNA-dependent |
IEA: Inferred from Electronic Annotation |
P |
Seeded From UniProt |
||||
| GO:0006355 |
regulation of transcription, DNA-dependent |
IEA: Inferred from Electronic Annotation |
P |
Seeded From UniProt |
||||
| GO:0006355 |
regulation of transcription, DNA-dependent |
IEA: Inferred from Electronic Annotation |
Ensembl:ENSMUSP00000023119 |
P |
Seeded From UniProt |
|||
| GO:0006816 |
calcium ion transport |
IEA: Inferred from Electronic Annotation |
Ensembl:ENSMUSP00000023119 |
P |
Seeded From UniProt |
|||
| GO:0006874 |
cellular calcium ion homeostasis |
IEA: Inferred from Electronic Annotation |
Ensembl:ENSMUSP00000023119 |
P |
Seeded From UniProt |
|||
| GO:0007165 |
signal transduction |
TAS: Traceable Author Statement |
|
P |
Seeded From UniProt |
|||
| GO:0007275 |
multicellular organismal development |
IEA: Inferred from Electronic Annotation |
Ensembl:ENSMUSP00000023119 |
P |
Seeded From UniProt |
|||
| GO:0007568 |
aging |
IEA: Inferred from Electronic Annotation |
Ensembl:ENSRNOP00000011601 |
P |
Seeded From UniProt |
|||
| GO:0007595 |
lactation |
IEA: Inferred from Electronic Annotation |
Ensembl:ENSMUSP00000023119 |
P |
Seeded From UniProt |
|||
| GO:0008270 |
zinc ion binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0008270 |
zinc ion binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0008285 |
negative regulation of cell proliferation |
IDA: Inferred from Direct Assay |
|
P |
Seeded From UniProt |
|||
| GO:0008434 |
vitamin D3 receptor activity |
IEA: Inferred from Electronic Annotation |
Ensembl:ENSRNOP00000011601 |
F |
Seeded From UniProt |
|||
| GO:0008434 |
vitamin D3 receptor activity |
IDA: Inferred from Direct Assay |
|
F |
Seeded From UniProt |
|||
| GO:0008434 |
vitamin D3 receptor activity |
IDA: Inferred from Direct Assay |
|
F |
Seeded From UniProt |
|||
| GO:0008624 |
induction of apoptosis by extracellular signals |
IEA: Inferred from Electronic Annotation |
Ensembl:ENSRNOP00000011601 |
P |
Seeded From UniProt |
|||
| GO:0009887 |
organ morphogenesis |
IEA: Inferred from Electronic Annotation |
Ensembl:ENSMUSP00000023119 |
P |
Seeded From UniProt |
|||
| GO:0010467 |
gene expression |
Reactome:REACT_71 |
TAS: Traceable Author Statement |
|
P |
Seeded From UniProt |
||
| GO:0010628 |
positive regulation of gene expression |
IMP: Inferred from Mutant Phenotype |
|
P |
Seeded From UniProt |
|||
| GO:0010839 |
negative regulation of keratinocyte proliferation |
IMP: Inferred from Mutant Phenotype |
|
P |
Seeded From UniProt |
|||
| GO:0010980 |
positive regulation of vitamin D 24-hydroxylase activity |
IDA: Inferred from Direct Assay |
|
P |
Seeded From UniProt |
|||
| GO:0030315 |
T-tubule |
IEA: Inferred from Electronic Annotation |
Ensembl:ENSRNOP00000011601 |
C |
Seeded From UniProt |
|||
| GO:0030522 |
intracellular receptor mediated signaling pathway |
IEA: Inferred from Electronic Annotation |
Ensembl:ENSMUSP00000023119 |
P |
Seeded From UniProt |
|||
| GO:0032355 |
response to estradiol stimulus |
IEA: Inferred from Electronic Annotation |
Ensembl:ENSRNOP00000011601 |
P |
Seeded From UniProt |
|||
| GO:0034339 |
regulation of transcription from RNA polymerase II promoter by nuclear hormone receptor |
Reactome:REACT_15525 |
TAS: Traceable Author Statement |
|
P |
Seeded From UniProt |
||
| GO:0043401 |
steroid hormone mediated signaling pathway |
IEA: Inferred from Electronic Annotation |
P |
Seeded From UniProt |
||||
| GO:0043401 |
steroid hormone mediated signaling pathway |
IEA: Inferred from Electronic Annotation |
P |
Seeded From UniProt |
||||
| GO:0043565 |
sequence-specific DNA binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0043565 |
sequence-specific DNA binding |
IEA: Inferred from Electronic Annotation |
Ensembl:ENSRNOP00000011601 |
F |
Seeded From UniProt |
|||
| GO:0045618 |
positive regulation of keratinocyte differentiation |
IMP: Inferred from Mutant Phenotype |
|
P |
Seeded From UniProt |
|||
| GO:0045892 |
negative regulation of transcription, DNA-dependent |
IDA: Inferred from Direct Assay |
|
P |
Seeded From UniProt |
|||
| GO:0045944 |
positive regulation of transcription from RNA polymerase II promoter |
IMP: Inferred from Mutant Phenotype |
|
P |
Seeded From UniProt |
|||
| GO:0045944 |
positive regulation of transcription from RNA polymerase II promoter |
IMP: Inferred from Mutant Phenotype |
|
P |
Seeded From UniProt |
|||
| GO:0046697 |
decidualization |
IEP: Inferred from Expression Pattern |
|
P |
Seeded From UniProt |
|||
| GO:0046872 |
metal ion binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0046965 |
retinoid X receptor binding |
IPI: Inferred from Physical Interaction |
F |
Seeded From UniProt |
||||
| GO:0050892 |
intestinal absorption |
IEA: Inferred from Electronic Annotation |
Ensembl:ENSMUSP00000023119 |
P |
Seeded From UniProt |
|||
| GO:0051592 |
response to calcium ion |
IEA: Inferred from Electronic Annotation |
Ensembl:ENSRNOP00000011601 |
P |
Seeded From UniProt |
|||
| GO:0051929 |
positive regulation of calcium ion transport via voltage-gated calcium channel activity |
IEA: Inferred from Electronic Annotation |
Ensembl:ENSRNOP00000011601 |
P |
Seeded From UniProt |
|||
| GO:0060058 |
positive regulation of apoptosis involved in mammary gland involution |
IEA: Inferred from Electronic Annotation |
Ensembl:ENSMUSP00000023119 |
P |
Seeded From UniProt |
|||
| GO:0060558 |
regulation of calcidiol 1-monooxygenase activity |
IEA: Inferred from Electronic Annotation |
Ensembl:ENSMUSP00000023119 |
P |
Seeded From UniProt |
|||
| GO:0060558 |
regulation of calcidiol 1-monooxygenase activity |
ISS: Inferred from Sequence or Structural Similarity |
P |
Seeded From UniProt |
||||
| GO:0060745 |
mammary gland branching involved in pregnancy |
IEA: Inferred from Electronic Annotation |
Ensembl:ENSMUSP00000023119 |
P |
Seeded From UniProt |
|||
| GO:0070561 |
vitamin D receptor signaling pathway |
IEA: Inferred from Electronic Annotation |
Ensembl:ENSRNOP00000011601 |
P |
Seeded From UniProt |
|||
| GO:0070561 |
vitamin D receptor signaling pathway |
IDA: Inferred from Direct Assay |
|
P |
Seeded From UniProt |
|||
| GO:0003700 |
sequence-specific DNA binding transcription factor activity |
IDA: Inferred from Direct Assay |
|
F |
Seeded From UniProt |
|||
| GO:0070644 |
vitamin D response element binding |
IDA: Inferred from Direct Assay |
|
F |
Seeded From UniProt |
|||
| GO:0046649 |
lymphocyte activation |
IEP: Inferred from Expression Pattern |
P |
FIG. 7. Western blot analysis of 1,25-(OH)2Ds receptor in activated human lymphocytes. |
complete | |||
| edit table |
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 1.4 Turunen MM et al. (2007) Selective use of multiple vitamin D response elements underlies the 1 alpha,25-dihydroxyvitamin D3-mediated negative regulation of the human CYP27B1 gene. Nucleic Acids Res 35: 2734-47 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Oda Y et al. (2007) Differential role of two VDR coactivators, DRIP205 and SRC-3, in keratinocyte proliferation and differentiation. J Steroid Biochem Mol Biol 103: 776-80 PubMed GONUTS page
- ↑ 3.0 3.1 Gonzalez MM & Carlberg C (2002) Cross-repression, a functional consequence of the physical interaction of non-liganded nuclear receptors and POU domain transcription factors. J Biol Chem 277: 18501-9 PubMed GONUTS page
- ↑ 4.0 4.1 Hughes MR et al. (1988) Point mutations in the human vitamin D receptor gene associated with hypocalcemic rickets. Science 242: 1702-5 PubMed GONUTS page
- ↑ Lavigne AC et al. (1999) Human TAF(II)55 interacts with the vitamin D(3) and thyroid hormone receptors and with derivatives of the retinoid X receptor that have altered transactivation properties. Mol Cell Biol 19: 5486-94 PubMed GONUTS page
- ↑ Mengus G et al. (2000) The human transcription factor IID subunit human TATA-binding protein-associated factor 28 interacts in a ligand-reversible manner with the vitamin D(3) and thyroid hormone receptors. J Biol Chem 275: 10064-71 PubMed GONUTS page
- ↑ Mahajan MA & Samuels HH (2000) A new family of nuclear receptor coregulators that integrate nuclear receptor signaling through CREB-binding protein. Mol Cell Biol 20: 5048-63 PubMed GONUTS page
- ↑ Fujiki R et al. (2005) Ligand-induced transrepression by VDR through association of WSTF with acetylated histones. EMBO J 24: 3881-94 PubMed GONUTS page
- ↑ 9.0 9.1 Zella LA et al. (2007) The vitamin D receptor interacts preferentially with DRIP205-like LxxLL motifs. Arch Biochem Biophys 460: 206-12 PubMed GONUTS page
- ↑ Stambolsky P et al. (2010) Modulation of the vitamin D3 response by cancer-associated mutant p53. Cancer Cell 17: 273-85 PubMed GONUTS page
- ↑ Li CW et al. (2010) Human ADA3 regulates RARalpha transcriptional activity through direct contact between LxxLL motifs and the receptor coactivator pocket. Nucleic Acids Res 38: 5291-303 PubMed GONUTS page
- ↑ Zhi HY et al. (2011) PTPH1 cooperates with vitamin D receptor to stimulate breast cancer growth through their mutual stabilization. Oncogene 30: 1706-15 PubMed GONUTS page
- ↑ Yuan CX et al. (1998) The TRAP220 component of a thyroid hormone receptor- associated protein (TRAP) coactivator complex interacts directly with nuclear receptors in a ligand-dependent fashion. Proc Natl Acad Sci U S A 95: 7939-44 PubMed GONUTS page
- ↑ Eyles DW et al. (2005) Distribution of the vitamin D receptor and 1 alpha-hydroxylase in human brain. J Chem Neuroanat 29: 21-30 PubMed GONUTS page
- ↑ 15.0 15.1 15.2 15.3 Hawker NP et al. (2007) Regulation of human epidermal keratinocyte differentiation by the vitamin D receptor and its coactivators DRIP205, SRC2, and SRC3. J Invest Dermatol 127: 874-80 PubMed GONUTS page
- ↑ 16.0 16.1 16.2 16.3 Kemmis CM et al. (2006) Human mammary epithelial cells express CYP27B1 and are growth inhibited by 25-hydroxyvitamin D-3, the major circulating form of vitamin D-3. J Nutr 136: 887-92 PubMed GONUTS page
- ↑ Viganò P et al. (2006) Cycling and early pregnant endometrium as a site of regulated expression of the vitamin D system. J Mol Endocrinol 36: 415-24 PubMed GONUTS page
- ↑ Yu XP et al. (1991) Vitamin D receptor expression in human lymphocytes. Signal requirements and characterization by western blots and DNA sequencing. J Biol Chem 266: 7588-95 PubMed GONUTS page