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HUMAN:VDR

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Contents

Species (Taxon ID) Homo sapiens (Human). ([1])
Gene Name(s) VDR (synonyms: NR1I1)
Protein Name(s) Vitamin D3 receptor

VDR 1,25-dihydroxyvitamin D3 receptor Nuclear receptor subfamily 1 group I member 1

External Links
EMBL J03258
X67482
AF026260
AB002168
AY342401
AK312267
CH471111
BC060832
M65208
AY827087
IPI IPI00005716
PIR A28200
RefSeq NP_000367.1
NP_001017535.1
NP_001017536.1
UniGene Hs.524368
PDB 1DB1
1IE8
1IE9
1KB2
1KB4
1KB6
1S0Z
1S19
1TXI
1YNW
2HAM
2HAR
2HAS
2HB7
2HB8
3A2I
3A2J
3A3Z
3A40
3A78
3AUQ
3AUR
3B0T
3CS4
3CS6
3M7R
3OGT
3P8X
PDBsum 1DB1
1IE8
1IE9
1KB2
1KB4
1KB6
1S0Z
1S19
1TXI
1YNW
2HAM
2HAR
2HAS
2HB7
2HB8
3A2I
3A2J
3A3Z
3A40
3A78
3AUQ
3AUR
3B0T
3CS4
3CS6
3M7R
3OGT
3P8X
ProteinModelPortal P11473
SMR P11473
DisProt DP00184
IntAct P11473
MINT MINT-236408
STRING P11473
PhosphoSite P11473
PRIDE P11473
Ensembl ENST00000229022
ENST00000395324
GeneID 7421
KEGG hsa:7421
UCSC uc001rqm.1
CTD 7421
GeneCards GC12M045266
H-InvDB HIX0010581
HGNC HGNC:12679
HPA CAB004617
MIM 277440
601769
607948
neXtProt NX_P11473
Orphanet 93160
437
PharmGKB PA37301
eggNOG prNOG11938
HOGENOM HBG713785
HOVERGEN HBG108655
InParanoid P11473
OMA KDSLRPK
OrthoDB EOG4J6RR1
PhylomeDB P11473
Pathway_Interaction_DB smad2_3nuclearpathway
retinoic_acid_pathway
rxr_vdr_pathway
Reactome REACT_71
DrugBank DB00146
DB02300
DB00136
DB01070
DB00153
DB00910
NextBio 29054
ArrayExpress P11473
Bgee P11473
CleanEx HS_VDR
Genevestigator P11473
GermOnline ENSG00000111424
GO GO:0005654
GO:0046965
GO:0003700
GO:0003707
GO:0008434
GO:0008270
GO:0046697
GO:0008285
GO:0000122
GO:0010980
GO:0060558
GO:0034339
InterPro IPR008946
IPR000536
IPR001723
IPR000324
IPR001628
IPR013088
Gene3D G3DSA:1.10.565.10
G3DSA:3.30.50.10
KO K08539
Pfam PF00104
PF00105
PRINTS PR00398
PR00047
PR00350
SMART SM00430
SM00399
SUPFAM SSF48508
PROSITE PS00031
PS51030

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0000122

negative regulation of transcription from RNA polymerase II promoter

PMID:17426122[1]

IDA: Inferred from Direct Assay

P

Seeded From UniProt

GO:0000902

cell morphogenesis

PMID:17223341[2]

IMP: Inferred from Mutant Phenotype

P

Seeded From UniProt

GO:0001501

skeletal system development

GO_REF:0000019

IEA: Inferred from Electronic Annotation

Ensembl:ENSMUSP00000023119

P

Seeded From UniProt

GO:0003677

DNA binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000324

F

Seeded From UniProt

GO:0003677

DNA binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR001723

F

Seeded From UniProt

GO:0003677

DNA binding

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0238

F

Seeded From UniProt

GO:0003677

DNA binding

GO_REF:0000019

IEA: Inferred from Electronic Annotation

Ensembl:ENSMUSP00000023119

F

Seeded From UniProt

GO:0003677

DNA binding

PMID:11891224[3]

IDA: Inferred from Direct Assay

F

Seeded From UniProt

GO:0003677

DNA binding

PMID:2849209[4]

TAS: Traceable Author Statement

F

Seeded From UniProt

GO:0003700

sequence-specific DNA binding transcription factor activity

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000536

F

Seeded From UniProt

GO:0003700

sequence-specific DNA binding transcription factor activity

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR001628

F

Seeded From UniProt

GO:0003700

sequence-specific DNA binding transcription factor activity

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR008946

F

Seeded From UniProt

GO:0003707

steroid hormone receptor activity

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000536

F

Seeded From UniProt

GO:0003707

steroid hormone receptor activity

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR001723

F

Seeded From UniProt

GO:0003707

steroid hormone receptor activity

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR008946

F

Seeded From UniProt

GO:0004872

receptor activity

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0675

F

Seeded From UniProt

GO:0004879

ligand-dependent nuclear receptor activity

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000324

F

Seeded From UniProt

GO:0004879

ligand-dependent nuclear receptor activity

GO_REF:0000019

IEA: Inferred from Electronic Annotation

Ensembl:ENSMUSP00000023119

F

Seeded From UniProt

GO:0005499

vitamin D binding

GO_REF:0000019

IEA: Inferred from Electronic Annotation

Ensembl:ENSRNOP00000011601

F

Seeded From UniProt

GO:0005515

protein binding

PMID:10409738[5]

IPI: Inferred from Physical Interaction

UniProtKB:Q15545

F

Seeded From UniProt

GO:0005515

protein binding

PMID:10744685[6]

IPI: Inferred from Physical Interaction

UniProtKB:Q15544

F

Seeded From UniProt

GO:0005515

protein binding

PMID:10866662[7]

IPI: Inferred from Physical Interaction

UniProtKB:Q9JLI4

F

Seeded From UniProt

GO:0005515

protein binding

PMID:16252006[8]

IPI: Inferred from Physical Interaction

UniProtKB:Q9UIG0

F

Seeded From UniProt

GO:0005515

protein binding

PMID:17254542[9]

IPI: Inferred from Physical Interaction

UniProtKB:Q15648

F

Seeded From UniProt

GO:0005515

protein binding

PMID:17426122[1]

IPI: Inferred from Physical Interaction

UniProtKB:P19793

F

Seeded From UniProt

GO:0005515

protein binding

PMID:20227041[10]

IPI: Inferred from Physical Interaction

UniProtKB:P04637

F

Seeded From UniProt

GO:0005515

protein binding

PMID:20413580[11]

IPI: Inferred from Physical Interaction

UniProtKB:O75528

F

Seeded From UniProt

GO:0005515

protein binding

PMID:21119599[12]

IPI: Inferred from Physical Interaction

UniProtKB:P26045

F

Seeded From UniProt

GO:0005515

protein binding

PMID:9653119[13]

IPI: Inferred from Physical Interaction

UniProtKB:Q15648

F

Seeded From UniProt

GO:0005634

nucleus

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000324

C

Seeded From UniProt

GO:0005634

nucleus

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000536

C

Seeded From UniProt

GO:0005634

nucleus

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR001628

C

Seeded From UniProt

GO:0005634

nucleus

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR001723

C

Seeded From UniProt

GO:0005634

nucleus

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR008946

C

Seeded From UniProt

GO:0005634

nucleus

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0539

C

Seeded From UniProt

GO:0005634

nucleus

GO_REF:0000023

IEA: Inferred from Electronic Annotation

SP_SL:SL-0191

C

Seeded From UniProt

GO:0005634

nucleus

PMID:15589699[14]

IDA: Inferred from Direct Assay

C

Seeded From UniProt

GO:0005634

nucleus

PMID:17082781[15]

IDA: Inferred from Direct Assay

C

Seeded From UniProt

GO:0005654

nucleoplasm

Reactome:REACT_19207

TAS: Traceable Author Statement

C

Seeded From UniProt

GO:0005720

nuclear heterochromatin

GO_REF:0000019

IEA: Inferred from Electronic Annotation

Ensembl:ENSRNOP00000011601

C

Seeded From UniProt

GO:0005792

microsome

GO_REF:0000019

IEA: Inferred from Electronic Annotation

Ensembl:ENSRNOP00000011601

C

Seeded From UniProt

GO:0005829

cytosol

GO_REF:0000019

IEA: Inferred from Electronic Annotation

Ensembl:ENSRNOP00000011601

C

Seeded From UniProt

GO:0006351

transcription, DNA-dependent

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0804

P

Seeded From UniProt

GO:0006355

regulation of transcription, DNA-dependent

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000324

P

Seeded From UniProt

GO:0006355

regulation of transcription, DNA-dependent

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000536

P

Seeded From UniProt

GO:0006355

regulation of transcription, DNA-dependent

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR001628

P

Seeded From UniProt

GO:0006355

regulation of transcription, DNA-dependent

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR001723

P

Seeded From UniProt

GO:0006355

regulation of transcription, DNA-dependent

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR008946

P

Seeded From UniProt

GO:0006355

regulation of transcription, DNA-dependent

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR013088

P

Seeded From UniProt

GO:0006355

regulation of transcription, DNA-dependent

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0805

P

Seeded From UniProt

GO:0006355

regulation of transcription, DNA-dependent

GO_REF:0000019

IEA: Inferred from Electronic Annotation

Ensembl:ENSMUSP00000023119

P

Seeded From UniProt

GO:0006816

calcium ion transport

GO_REF:0000019

IEA: Inferred from Electronic Annotation

Ensembl:ENSMUSP00000023119

P

Seeded From UniProt

GO:0006874

cellular calcium ion homeostasis

GO_REF:0000019

IEA: Inferred from Electronic Annotation

Ensembl:ENSMUSP00000023119

P

Seeded From UniProt

GO:0007165

signal transduction

PMID:2849209[4]

TAS: Traceable Author Statement

P

Seeded From UniProt

GO:0007275

multicellular organismal development

GO_REF:0000019

IEA: Inferred from Electronic Annotation

Ensembl:ENSMUSP00000023119

P

Seeded From UniProt

GO:0007568

aging

GO_REF:0000019

IEA: Inferred from Electronic Annotation

Ensembl:ENSRNOP00000011601

P

Seeded From UniProt

GO:0007595

lactation

GO_REF:0000019

IEA: Inferred from Electronic Annotation

Ensembl:ENSMUSP00000023119

P

Seeded From UniProt

GO:0008270

zinc ion binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR001628

F

Seeded From UniProt

GO:0008270

zinc ion binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR013088

F

Seeded From UniProt

GO:0008285

negative regulation of cell proliferation

PMID:16549446[16]

IDA: Inferred from Direct Assay

P

Seeded From UniProt

GO:0008434

vitamin D3 receptor activity

GO_REF:0000019

IEA: Inferred from Electronic Annotation

Ensembl:ENSRNOP00000011601

F

Seeded From UniProt

GO:0008434

vitamin D3 receptor activity

PMID:16549446[16]

IDA: Inferred from Direct Assay

F

Seeded From UniProt

GO:0008434

vitamin D3 receptor activity

PMID:17082781[15]

IDA: Inferred from Direct Assay

F

Seeded From UniProt

GO:0008624

induction of apoptosis by extracellular signals

GO_REF:0000019

IEA: Inferred from Electronic Annotation

Ensembl:ENSRNOP00000011601

P

Seeded From UniProt

GO:0009887

organ morphogenesis

GO_REF:0000019

IEA: Inferred from Electronic Annotation

Ensembl:ENSMUSP00000023119

P

Seeded From UniProt

GO:0010467

gene expression

Reactome:REACT_71

TAS: Traceable Author Statement

P

Seeded From UniProt

GO:0010628

positive regulation of gene expression

PMID:17223341[2]

IMP: Inferred from Mutant Phenotype

P

Seeded From UniProt

GO:0010839

negative regulation of keratinocyte proliferation

PMID:17223341[2]

IMP: Inferred from Mutant Phenotype

P

Seeded From UniProt

GO:0010980

positive regulation of vitamin D 24-hydroxylase activity

PMID:16549446[16]

IDA: Inferred from Direct Assay

P

Seeded From UniProt

GO:0030315

T-tubule

GO_REF:0000019

IEA: Inferred from Electronic Annotation

Ensembl:ENSRNOP00000011601

C

Seeded From UniProt

GO:0030522

intracellular receptor mediated signaling pathway

GO_REF:0000019

IEA: Inferred from Electronic Annotation

Ensembl:ENSMUSP00000023119

P

Seeded From UniProt

GO:0032355

response to estradiol stimulus

GO_REF:0000019

IEA: Inferred from Electronic Annotation

Ensembl:ENSRNOP00000011601

P

Seeded From UniProt

GO:0034339

regulation of transcription from RNA polymerase II promoter by nuclear hormone receptor

Reactome:REACT_15525

TAS: Traceable Author Statement

P

Seeded From UniProt

GO:0043401

steroid hormone mediated signaling pathway

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000536

P

Seeded From UniProt

GO:0043401

steroid hormone mediated signaling pathway

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR008946

P

Seeded From UniProt

GO:0043565

sequence-specific DNA binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR001628

F

Seeded From UniProt

GO:0043565

sequence-specific DNA binding

GO_REF:0000019

IEA: Inferred from Electronic Annotation

Ensembl:ENSRNOP00000011601

F

Seeded From UniProt

GO:0045618

positive regulation of keratinocyte differentiation

PMID:17082781[15]

IMP: Inferred from Mutant Phenotype

P

Seeded From UniProt

GO:0045892

negative regulation of transcription, DNA-dependent

PMID:11891224[3]

IDA: Inferred from Direct Assay

P

Seeded From UniProt

GO:0045944

positive regulation of transcription from RNA polymerase II promoter

PMID:17082781[15]

IMP: Inferred from Mutant Phenotype

P

Seeded From UniProt

GO:0045944

positive regulation of transcription from RNA polymerase II promoter

PMID:17254542[9]

IMP: Inferred from Mutant Phenotype

P

Seeded From UniProt

GO:0046697

decidualization

PMID:16720713[17]

IEP: Inferred from Expression Pattern

P

Seeded From UniProt

GO:0046872

metal ion binding

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0479

F

Seeded From UniProt

GO:0046965

retinoid X receptor binding

PMID:17426122[1]

IPI: Inferred from Physical Interaction

UniProtKB:P19793

F

Seeded From UniProt

GO:0050892

intestinal absorption

GO_REF:0000019

IEA: Inferred from Electronic Annotation

Ensembl:ENSMUSP00000023119

P

Seeded From UniProt

GO:0051592

response to calcium ion

GO_REF:0000019

IEA: Inferred from Electronic Annotation

Ensembl:ENSRNOP00000011601

P

Seeded From UniProt

GO:0051929

positive regulation of calcium ion transport via voltage-gated calcium channel activity

GO_REF:0000019

IEA: Inferred from Electronic Annotation

Ensembl:ENSRNOP00000011601

P

Seeded From UniProt

GO:0060058

positive regulation of apoptosis involved in mammary gland involution

GO_REF:0000019

IEA: Inferred from Electronic Annotation

Ensembl:ENSMUSP00000023119

P

Seeded From UniProt

GO:0060558

regulation of calcidiol 1-monooxygenase activity

GO_REF:0000019

IEA: Inferred from Electronic Annotation

Ensembl:ENSMUSP00000023119

P

Seeded From UniProt

GO:0060558

regulation of calcidiol 1-monooxygenase activity

GO_REF:0000024

ISS: Inferred from Sequence or Structural Similarity

UniProtKB:P48281

P

Seeded From UniProt

GO:0060745

mammary gland branching involved in pregnancy

GO_REF:0000019

IEA: Inferred from Electronic Annotation

Ensembl:ENSMUSP00000023119

P

Seeded From UniProt

GO:0070561

vitamin D receptor signaling pathway

GO_REF:0000019

IEA: Inferred from Electronic Annotation

Ensembl:ENSRNOP00000011601

P

Seeded From UniProt

GO:0070561

vitamin D receptor signaling pathway

PMID:16549446[16]

IDA: Inferred from Direct Assay

P

Seeded From UniProt

GO:0003700

sequence-specific DNA binding transcription factor activity

PMID:17426122[1]

IDA: Inferred from Direct Assay

F

Seeded From UniProt

GO:0070644

vitamin D response element binding

PMID:17426122[1]

IDA: Inferred from Direct Assay

F

Seeded From UniProt

GO:0046649

lymphocyte activation

PMID:1850412[18]

IEP: Inferred from Expression Pattern

P

FIG. 7. Western blot analysis of 1,25-(OH)2Ds receptor in activated human lymphocytes.

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. ↑ 1.0 1.1 1.2 1.3 1.4 Turunen MM et al. (2007) Selective use of multiple vitamin D response elements underlies the 1 alpha,25-dihydroxyvitamin D3-mediated negative regulation of the human CYP27B1 gene. Nucleic Acids Res 35: 2734-47 PubMed GONUTS page
  2. ↑ 2.0 2.1 2.2 Oda Y et al. (2007) Differential role of two VDR coactivators, DRIP205 and SRC-3, in keratinocyte proliferation and differentiation. J Steroid Biochem Mol Biol 103: 776-80 PubMed GONUTS page
  3. ↑ 3.0 3.1 Gonzalez MM & Carlberg C (2002) Cross-repression, a functional consequence of the physical interaction of non-liganded nuclear receptors and POU domain transcription factors. J Biol Chem 277: 18501-9 PubMed GONUTS page
  4. ↑ 4.0 4.1 Hughes MR et al. (1988) Point mutations in the human vitamin D receptor gene associated with hypocalcemic rickets. Science 242: 1702-5 PubMed GONUTS page
  5. ↑ Lavigne AC et al. (1999) Human TAF(II)55 interacts with the vitamin D(3) and thyroid hormone receptors and with derivatives of the retinoid X receptor that have altered transactivation properties. Mol Cell Biol 19: 5486-94 PubMed GONUTS page
  6. ↑ Mengus G et al. (2000) The human transcription factor IID subunit human TATA-binding protein-associated factor 28 interacts in a ligand-reversible manner with the vitamin D(3) and thyroid hormone receptors. J Biol Chem 275: 10064-71 PubMed GONUTS page
  7. ↑ Mahajan MA & Samuels HH (2000) A new family of nuclear receptor coregulators that integrate nuclear receptor signaling through CREB-binding protein. Mol Cell Biol 20: 5048-63 PubMed GONUTS page
  8. ↑ Fujiki R et al. (2005) Ligand-induced transrepression by VDR through association of WSTF with acetylated histones. EMBO J 24: 3881-94 PubMed GONUTS page
  9. ↑ 9.0 9.1 Zella LA et al. (2007) The vitamin D receptor interacts preferentially with DRIP205-like LxxLL motifs. Arch Biochem Biophys 460: 206-12 PubMed GONUTS page
  10. ↑ Stambolsky P et al. (2010) Modulation of the vitamin D3 response by cancer-associated mutant p53. Cancer Cell 17: 273-85 PubMed GONUTS page
  11. ↑ Li CW et al. (2010) Human ADA3 regulates RARalpha transcriptional activity through direct contact between LxxLL motifs and the receptor coactivator pocket. Nucleic Acids Res 38: 5291-303 PubMed GONUTS page
  12. ↑ Zhi HY et al. (2011) PTPH1 cooperates with vitamin D receptor to stimulate breast cancer growth through their mutual stabilization. Oncogene 30: 1706-15 PubMed GONUTS page
  13. ↑ Yuan CX et al. (1998) The TRAP220 component of a thyroid hormone receptor- associated protein (TRAP) coactivator complex interacts directly with nuclear receptors in a ligand-dependent fashion. Proc Natl Acad Sci U S A 95: 7939-44 PubMed GONUTS page
  14. ↑ Eyles DW et al. (2005) Distribution of the vitamin D receptor and 1 alpha-hydroxylase in human brain. J Chem Neuroanat 29: 21-30 PubMed GONUTS page
  15. ↑ 15.0 15.1 15.2 15.3 Hawker NP et al. (2007) Regulation of human epidermal keratinocyte differentiation by the vitamin D receptor and its coactivators DRIP205, SRC2, and SRC3. J Invest Dermatol 127: 874-80 PubMed GONUTS page
  16. ↑ 16.0 16.1 16.2 16.3 Kemmis CM et al. (2006) Human mammary epithelial cells express CYP27B1 and are growth inhibited by 25-hydroxyvitamin D-3, the major circulating form of vitamin D-3. J Nutr 136: 887-92 PubMed GONUTS page
  17. ↑ Viganò P et al. (2006) Cycling and early pregnant endometrium as a site of regulated expression of the vitamin D system. J Mol Endocrinol 36: 415-24 PubMed GONUTS page
  18. ↑ Yu XP et al. (1991) Vitamin D receptor expression in human lymphocytes. Signal requirements and characterization by western blots and DNA sequencing. J Biol Chem 266: 7588-95 PubMed GONUTS page
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