GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

HUMAN:ELAV1

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Homo sapiens (Human). (9606)
Gene Name(s) ELAVL1 (synonyms: HUR)
Protein Name(s) ELAV-like protein 1

Hu-antigen R HuR

External Links
UniProt Q15717
EMBL U38175
BT009793
AK301013
AC008975
AC010336
CH471139
BC003376
CCDS CCDS12193.1
RefSeq NP_001410.2
UniGene Hs.184492
Hs.713744
PDB 3HI9
4ED5
4EGL
4FXV
PDBsum 3HI9
4ED5
4EGL
4FXV
ProteinModelPortal Q15717
SMR Q15717
BioGrid 108309
DIP DIP-31291N
IntAct Q15717
MINT MINT-5001300
STRING 9606.ENSP00000385269
BindingDB Q15717
ChEMBL CHEMBL1250379
PhosphoSite Q15717
DMDM 20981691
MaxQB Q15717
PaxDb Q15717
PeptideAtlas Q15717
PRIDE Q15717
DNASU 1994
Ensembl ENST00000351593
ENST00000407627
ENST00000596459
GeneID 1994
KEGG hsa:1994
UCSC uc002mjb.3
CTD 1994
GeneCards GC19M008023
HGNC HGNC:3312
HPA CAB005256
MIM 603466
neXtProt NX_Q15717
PharmGKB PA27740
eggNOG COG0724
GeneTree ENSGT00760000118913
HOGENOM HOG000231162
HOVERGEN HBG002295
InParanoid Q15717
KO K13088
OMA RFGGPLH
OrthoDB EOG77T14R
PhylomeDB Q15717
TreeFam TF313377
Reactome REACT_25218
EvolutionaryTrace Q15717
GeneWiki ELAVL1
GenomeRNAi 1994
NextBio 35475416
PRO PR:Q15717
Proteomes UP000005640
Bgee Q15717
CleanEx HS_ELAVL1
ExpressionAtlas Q15717
Genevestigator Q15717
GO GO:0005737
GO:0005829
GO:0016020
GO:0005654
GO:0005634
GO:0017091
GO:0003725
GO:0035925
GO:0003730
GO:0003729
GO:0000166
GO:0044822
GO:0019901
GO:0003723
GO:0070935
GO:0010467
GO:0016071
GO:0048255
GO:0007275
GO:0045727
GO:2000036
GO:0016070
Gene3D 3.30.70.330
InterPro IPR006548
IPR002343
IPR012677
IPR000504
Pfam PF00076
PRINTS PR00961
SMART SM00360
TIGRFAMs TIGR01661
PROSITE PS50102

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:0070935

3'-UTR-mediated mRNA stabilization

PMID:29180010[1]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0010494

cytoplasmic stress granule

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P70372

C

Seeded From UniProt

complete

enables

GO:0035925

mRNA 3'-UTR AU-rich region binding

PMID:26489465[2]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0070935

3'-UTR-mediated mRNA stabilization

PMID:26489465[2]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0035925

mRNA 3'-UTR AU-rich region binding

PMID:14731398[3]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

part_of

GO:0010494

cytoplasmic stress granule

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P70372

C

exists_during:(GO:0034599)

Seeded From UniProt

complete

involved_in

GO:0060965

negative regulation of gene silencing by miRNA

PMID:26595526[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0051260

protein homooligomerization

PMID:26595526[4]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0035198

miRNA binding

PMID:26595526[4]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003730

mRNA 3'-UTR binding

PMID:26595526[4]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0042803

protein homodimerization activity

PMID:17632515[5]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:Q15717

F

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

PMID:17632515[5]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005654

nucleoplasm

PMID:17632515[5]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0017091

AU-rich element binding

PMID:23519412[6]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0035925

mRNA 3'-UTR AU-rich region binding

PMID:8626503[7]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

part_of

GO:1990904

ribonucleoprotein complex

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P70372

C

Seeded From UniProt

complete

enables

GO:0035925

mRNA 3'-UTR AU-rich region binding

PMID:16126846[8]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

part_of

GO:0016020

membrane

PMID:19946888[9]

ECO:0007005

high throughput direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0060965

negative regulation of gene silencing by miRNA

PMID:27089893[10]

ECO:0000316

genetic interaction evidence used in manual assertion

RNAcentral:URS000024463E_9606

P

  • regulates_expression_of:(ENSEMBL:ENSG00000070018)
  • occurs_in:(CL:0002563)

Seeded From UniProt

complete

involved_in

GO:2000036

regulation of stem cell population maintenance

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P70372

P

Seeded From UniProt

complete

involved_in

GO:0070935

3'-UTR-mediated mRNA stabilization

PMID:19029303[11]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0070935

3'-UTR-mediated mRNA stabilization

PMID:14517288[12]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0048255

mRNA stabilization

PMID:19029303[11]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

PMID:22658674[13]

ECO:0007005

high throughput direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

PMID:22681889[14]

ECO:0007005

high throughput direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0019901

protein kinase binding

PMID:14517288[12]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:P49137

F

Seeded From UniProt

complete

enables

GO:0017091

AU-rich element binding

PMID:14517288[12]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:14517288[12]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:19029303[11]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:14517288[12]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0003730

mRNA 3'-UTR binding

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P70372

F

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

PMID:19561594[15]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0048255

mRNA stabilization

PMID:21613615[16]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045727

positive regulation of translation

PMID:21613615[16]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0035925

mRNA 3'-UTR AU-rich region binding

PMID:23056314[17]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003725

double-stranded RNA binding

PMID:21266579[18]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

PMID:21613615[16]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0019901

protein kinase binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:B5DF91
ensembl:ENSRNOP00000001415

F

Seeded From UniProt

complete

enables

GO:0003730

mRNA 3'-UTR binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:B5DF91
ensembl:ENSRNOP00000001415

F

Seeded From UniProt

complete

involved_in

GO:2000036

regulation of stem cell population maintenance

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P70372
ensembl:ENSMUSP00000096549

P

Seeded From UniProt

complete

part_of

GO:1990904

ribonucleoprotein complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P70372
ensembl:ENSMUSP00000096549

C

Seeded From UniProt

complete

part_of

GO:0098978

glutamatergic synapse

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P70372
ensembl:ENSMUSP00000096549

C

Seeded From UniProt

complete

part_of

GO:0098794

postsynapse

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P70372
ensembl:ENSMUSP00000096549

C

Seeded From UniProt

complete

involved_in

GO:0070935

3'-UTR-mediated mRNA stabilization

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P70372
ensembl:ENSMUSP00000096549

P

Seeded From UniProt

complete

involved_in

GO:0048255

mRNA stabilization

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P70372
ensembl:ENSMUSP00000096549

P

Seeded From UniProt

complete

involved_in

GO:0045727

positive regulation of translation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P70372
ensembl:ENSMUSP00000096549

P

Seeded From UniProt

complete

enables

GO:0035925

mRNA 3'-UTR AU-rich region binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P70372
ensembl:ENSMUSP00000096549

F

Seeded From UniProt

complete

part_of

GO:0010494

cytoplasmic stress granule

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P70372
ensembl:ENSMUSP00000096549

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P70372
ensembl:ENSMUSP00000096549

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P70372
ensembl:ENSMUSP00000096549

C

Seeded From UniProt

complete

enables

GO:0003730

mRNA 3'-UTR binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P70372
ensembl:ENSMUSP00000096549

F

Seeded From UniProt

complete

enables

GO:0003729

mRNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P70372
ensembl:ENSMUSP00000096549

F

Seeded From UniProt

complete

enables

GO:0003676

nucleic acid binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000504
InterPro:IPR035979

F

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002343
InterPro:IPR006548

F

Seeded From UniProt

complete

enables

GO:0003729

mRNA binding

PMID:10660597[19]

ECO:0000304

author statement supported by traceable reference used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0043488

regulation of mRNA stability

Reactome:R-HSA-450520

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

Reactome:R-HSA-450595

ECO:0000304

author statement supported by traceable reference used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005654

nucleoplasm

Reactome:R-HSA-72160
Reactome:R-HSA-72143
Reactome:R-HSA-72139
Reactome:R-HSA-72130
Reactome:R-HSA-72127
Reactome:R-HSA-72124
Reactome:R-HSA-517705
Reactome:R-HSA-517674
Reactome:R-HSA-450595
Reactome:R-HSA-450550
Reactome:R-HSA-450533
Reactome:R-HSA-450494
Reactome:R-HSA-450387
Reactome:R-HSA-156661

ECO:0000304

author statement supported by traceable reference used in manual assertion














C

Seeded From UniProt

complete

involved_in

GO:0000398

mRNA splicing, via spliceosome

Reactome:R-HSA-72163

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0694

F

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

part_of

GO:0010494

cytoplasmic stress granule

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0496

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Maeda, A et al. (2018) Role of N-myristoylation in stability and subcellular localization of the CLPABP protein. Biochem. Biophys. Res. Commun. 495 1249-1256 PubMed GONUTS page
  2. 2.0 2.1 Nie, J et al. (2015) Post-transcriptional Regulation of Nkx2-5 by RHAU in Heart Development. Cell Rep 13 723-732 PubMed GONUTS page
  3. Tran, H et al. (2004) Facilitation of mRNA deadenylation and decay by the exosome-bound, DExH protein RHAU. Mol. Cell 13 101-11 PubMed GONUTS page
  4. 4.0 4.1 4.2 4.3 Liwak-Muir, U et al. (2016) ERK8 is a novel HuR kinase that regulates tumour suppressor PDCD4 through a miR-21 dependent mechanism. Oncotarget 7 1439-50 PubMed GONUTS page
  5. 5.0 5.1 5.2 Meisner, NC et al. (2007) Identification and mechanistic characterization of low-molecular-weight inhibitors for HuR. Nat. Chem. Biol. 3 508-15 PubMed GONUTS page
  6. Wang, H et al. (2013) The structure of the ARE-binding domains of Hu antigen R (HuR) undergoes conformational changes during RNA binding. Acta Crystallogr. D Biol. Crystallogr. 69 373-80 PubMed GONUTS page
  7. Ma, WJ et al. (1996) Cloning and characterization of HuR, a ubiquitously expressed Elav-like protein. J. Biol. Chem. 271 8144-51 PubMed GONUTS page
  8. Linker, K et al. (2005) Involvement of KSRP in the post-transcriptional regulation of human iNOS expression-complex interplay of KSRP with TTP and HuR. Nucleic Acids Res. 33 4813-27 PubMed GONUTS page
  9. Ghosh, D et al. (2010) Defining the membrane proteome of NK cells. J Mass Spectrom 45 1-25 PubMed GONUTS page
  10. Li, Y et al. (2016) Post-transcriptional regulation of Wnt co-receptor LRP6 and RNA-binding protein HuR by miR-29b in intestinal epithelial cells. Biochem. J. 473 1641-9 PubMed GONUTS page
  11. 11.0 11.1 11.2 Weidensdorfer, D et al. (2009) Control of c-myc mRNA stability by IGF2BP1-associated cytoplasmic RNPs. RNA 15 104-15 PubMed GONUTS page
  12. 12.0 12.1 12.2 12.3 12.4 Tran, H et al. (2003) Stabilization of urokinase and urokinase receptor mRNAs by HuR is linked to its cytoplasmic accumulation induced by activated mitogen-activated protein kinase-activated protein kinase 2. Mol. Cell. Biol. 23 7177-88 PubMed GONUTS page
  13. Castello, A et al. (2012) Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. Cell 149 1393-406 PubMed GONUTS page
  14. Baltz, AG et al. (2012) The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts. Mol. Cell 46 674-90 PubMed GONUTS page
  15. Ray, D et al. (2009) Rapid and systematic analysis of the RNA recognition specificities of RNA-binding proteins. Nat. Biotechnol. 27 667-70 PubMed GONUTS page
  16. 16.0 16.1 16.2 Stellato, C et al. (2011) Coordinate regulation of GATA-3 and Th2 cytokine gene expression by the RNA-binding protein HuR. J. Immunol. 187 441-9 PubMed GONUTS page
  17. Miyashita, H et al. (2012) Angiogenesis inhibitor vasohibin-1 enhances stress resistance of endothelial cells via induction of SOD2 and SIRT1. PLoS ONE 7 e46459 PubMed GONUTS page
  18. Watanabe, A et al. (2011) Raftlin is involved in the nucleocapture complex to induce poly(I:C)-mediated TLR3 activation. J. Biol. Chem. 286 10702-11 PubMed GONUTS page
  19. Blaxall, BC et al. (2000) Purification and characterization of beta-adrenergic receptor mRNA-binding proteins. J. Biol. Chem. 275 4290-7 PubMed GONUTS page