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HUMAN:CDC5L
Contents |
| Species (Taxon ID) | Homo sapiens (Human). (9606) | |
| Gene Name(s) | CDC5L (synonyms: KIAA0432, PCDC5RP) | |
| Protein Name(s) | Cell division cycle 5-like protein
Cdc5-like protein Pombe cdc5-related protein | |
| External Links | ||
| UniProt | Q99459 | |
| EMBL | U86753 AB007892 AY518540 AL133262 AL353588 AL353588 AL133262 BC001568 D85423 | |
| IPI | IPI00465294 | |
| RefSeq | NP_001244.1 | |
| UniGene | Hs.485471 | |
| PDB | 2DIM 2DIN | |
| PDBsum | 2DIM 2DIN | |
| ProteinModelPortal | Q99459 | |
| SMR | Q99459 | |
| IntAct | Q99459 | |
| MINT | MINT-133723 | |
| STRING | Q99459 | |
| PhosphoSite | Q99459 | |
| DMDM | 73619933 | |
| PeptideAtlas | Q99459 | |
| PRIDE | Q99459 | |
| Ensembl | ENST00000371477 | |
| GeneID | 988 | |
| KEGG | hsa:988 | |
| UCSC | uc003oxl.1 | |
| CTD | 988 | |
| GeneCards | GC06P044402 | |
| H-InvDB | HIX0005928 | |
| HGNC | HGNC:1743 | |
| HPA | CAB012275 HPA006302 HPA011361 | |
| MIM | 602868 | |
| neXtProt | NX_Q99459 | |
| PharmGKB | PA26270 | |
| eggNOG | prNOG18711 | |
| GeneTree | ENSGT00550000074922 | |
| HOGENOM | HBG630413 | |
| HOVERGEN | HBG052766 | |
| InParanoid | Q99459 | |
| OMA | PRNDYEI | |
| OrthoDB | EOG48GW2S | |
| PhylomeDB | Q99459 | |
| NextBio | 4146 | |
| PMAP-CutDB | Q99459 | |
| ArrayExpress | Q99459 | |
| Bgee | Q99459 | |
| CleanEx | HS_CDC5L | |
| Genevestigator | Q99459 | |
| GermOnline | ENSG00000096401 | |
| GO | GO:0071013 GO:0005737 GO:0016607 GO:0005730 GO:0003677 GO:0003723 GO:0007049 GO:0000398 GO:0006355 GO:0006351 | |
| InterPro | IPR021786 IPR009057 IPR012287 IPR014778 IPR015495 IPR001005 IPR017930 | |
| Gene3D | G3DSA:1.10.10.60 | |
| KO | K12860 | |
| PANTHER | PTHR10641 | |
| Pfam | PF11831 PF00249 | |
| SMART | SM00717 | |
| SUPFAM | SSF46689 | |
| PROSITE | PS51294 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0000398 |
nuclear mRNA splicing, via spliceosome |
IC: Inferred by Curator |
GO:0071013 |
P |
Seeded From UniProt |
|||
| GO:0003677 |
DNA binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0003677 |
DNA binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0003677 |
DNA binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0003677 |
DNA binding |
NAS: Non-traceable Author Statement |
|
F |
Seeded From UniProt |
|||
| GO:0003723 |
RNA binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0005515 |
protein binding |
IPI: Inferred from Physical Interaction |
F |
Seeded From UniProt |
||||
| GO:0005634 |
nucleus |
IEA: Inferred from Electronic Annotation |
C |
Seeded From UniProt |
||||
| GO:0005634 |
nucleus |
IEA: Inferred from Electronic Annotation |
Ensembl:ENSRNOP00000027264 |
C |
Seeded From UniProt |
|||
| GO:0005634 |
nucleus |
NAS: Non-traceable Author Statement |
|
C |
Seeded From UniProt |
|||
| GO:0005634 |
nucleus |
IDA: Inferred from Direct Assay |
|
C |
Seeded From UniProt |
|||
| GO:0005681 |
spliceosomal complex |
IEA: Inferred from Electronic Annotation |
C |
Seeded From UniProt |
||||
| GO:0005730 |
nucleolus |
IDA: Inferred from Direct Assay |
|
C |
Seeded From UniProt |
|||
| GO:0005737 |
cytoplasm |
IEA: Inferred from Electronic Annotation |
C |
Seeded From UniProt |
||||
| GO:0005737 |
cytoplasm |
IEA: Inferred from Electronic Annotation |
SP_SL:SL-0086 |
C |
Seeded From UniProt |
|||
| GO:0006351 |
transcription, DNA-dependent |
IEA: Inferred from Electronic Annotation |
P |
Seeded From UniProt |
||||
| GO:0006355 |
regulation of transcription, DNA-dependent |
IEA: Inferred from Electronic Annotation |
P |
Seeded From UniProt |
||||
| GO:0006355 |
regulation of transcription, DNA-dependent |
IEA: Inferred from Electronic Annotation |
P |
Seeded From UniProt |
||||
| GO:0006355 |
regulation of transcription, DNA-dependent |
NAS: Non-traceable Author Statement |
|
P |
Seeded From UniProt |
|||
| GO:0006397 |
mRNA processing |
IEA: Inferred from Electronic Annotation |
P |
Seeded From UniProt |
||||
| GO:0007049 |
cell cycle |
IEA: Inferred from Electronic Annotation |
P |
Seeded From UniProt |
||||
| GO:0008380 |
RNA splicing |
IEA: Inferred from Electronic Annotation |
P |
Seeded From UniProt |
||||
| GO:0016607 |
nuclear speck |
IEA: Inferred from Electronic Annotation |
Ensembl:ENSRNOP00000027264 |
C |
Seeded From UniProt |
|||
| GO:0016607 |
nuclear speck |
IEA: Inferred from Electronic Annotation |
SP_SL:SL-0186 |
C |
Seeded From UniProt |
|||
| GO:0016607 |
nuclear speck |
IDA: Inferred from Direct Assay |
|
C |
Seeded From UniProt |
|||
| GO:0019904 |
protein domain specific binding |
IEA: Inferred from Electronic Annotation |
Ensembl:ENSRNOP00000027264 |
F |
Seeded From UniProt |
|||
| GO:0071013 |
catalytic step 2 spliceosome |
IDA: Inferred from Direct Assay |
|
C |
Seeded From UniProt |
|||
| GO:0005730 |
nucleolus |
IDA: Inferred from Direct Assay |
|
C |
Seeded From UniProt |
|||
| GO:0005737 |
cytoplasm |
IDA: Inferred from Direct Assay |
C |
Figure 4a found that PCDC5RP was exclusively in the cytoplasm in transfected CV-1 cells. |
complete | |||
| edit table |
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Jurica MS et al. (2002) Purification and characterization of native spliceosomes suitable for three-dimensional structural analysis. RNA 8: 426-39 PubMed GONUTS page
- ↑ Hirayama T & Shinozaki K (1996) A cdc5+ homolog of a higher plant, Arabidopsis thaliana. Proc Natl Acad Sci U S A 93: 13371-6 PubMed GONUTS page
- ↑ Conticello SG et al. (2008) Interaction between antibody-diversification enzyme AID and spliceosome-associated factor CTNNBL1. Mol Cell 31: 474-84 PubMed GONUTS page
- ↑ 4.0 4.1 4.2 Barbe L et al. (2008) Toward a confocal subcellular atlas of the human proteome. Mol Cell Proteomics 7: 499-508 PubMed GONUTS page
- ↑ Grillari J et al. (2005) SNEV is an evolutionarily conserved splicing factor whose oligomerization is necessary for spliceosome assembly. Nucleic Acids Res 33: 6868-83 PubMed GONUTS page
- ↑ Bernstein HS & Coughlin SR (1997) Pombe Cdc5-related protein. A putative human transcription factor implicated in mitogen-activated signaling. J Biol Chem 272: 5833-7 PubMed GONUTS page
cdmn |
n cont.pr |
r cont.st |
