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FB:Nipped-B
Contents |
| Species (Taxon ID) | Drosophila melanogaster (fruit fly) (taxon:7227) | |
| Gene Name(s) | Nipped-B ( synonyms: CG17704, CG40281, NipB, Nipped, Nipped B, l(2)02047, nipped-B ) | |
| Protein Name(s) | Nipped-B, | |
| External Links | ||
| FB | FBgn0026401 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0007064 |
mitotic sister chromatid cohesion |
FB:FBrf0174962 |
IMP: Inferred from Mutant Phenotype |
P |
From FB |
complete | ||
| GO:0005634 |
nucleus |
FB:FBrf0174962 |
IDA: Inferred from Direct Assay |
C |
From FB |
complete | ||
| GO:0003682 |
chromatin binding |
FB:FBrf0203017 |
IDA: Inferred from Direct Assay |
F |
See SF2952055 NTR: transcriptionally active chromatin binding. Or is this a cellular component? |
complete | ||
| GO:0010628 |
positive regulation of gene expression |
FB:FBrf0203143 |
IMP: Inferred from Mutant Phenotype |
P |
From FB |
complete | ||
| GO:0007064 |
mitotic sister chromatid cohesion |
FB:FBrf0203143 |
IMP: Inferred from Mutant Phenotype |
P |
From FB |
complete | ||
| GO:0043234 |
protein complex |
FB:FBrf0203143 |
IDA: Inferred from Direct Assay |
C |
From FB |
complete | ||
|
Colocalizes with |
GO:0000795 |
synaptonemal complex |
FB:FBrf0203143 |
IDA: Inferred from Direct Assay |
C |
From FB |
complete | |
|
Colocalizes with |
GO:0008278 |
cohesin complex |
FB:FBrf0203143 |
IDA: Inferred from Direct Assay |
C |
From FB |
complete | |
| GO:0005634 |
nucleus |
FB:FBrf0203143 |
IDA: Inferred from Direct Assay |
C |
From FB |
complete | ||
| GO:0010628 |
positive regulation of gene expression |
FB:FBrf0205879 |
IGI: Inferred from Genetic Interaction |
FB:FBgn0004644
|
P |
From FB |
complete | |
| GO:0045893 |
positive regulation of transcription, DNA-dependent |
FB:FBrf0109032 |
IMP: Inferred from Mutant Phenotype |
P |
SF 2952117 NTR: long-range enhancer-promoter communication |
complete | ||
| GO:0005488 |
binding |
FB:FBrf0174215 |
IEA: Inferred from Electronic Annotation |
F |
From FB |
|||
| GO:0005634 |
nucleus |
FB:FBrf0174962 |
IDA: Inferred from Direct Assay |
C |
From FB |
|||
| GO:0005634 |
nucleus |
FB:FBrf0203143 |
IDA: Inferred from Direct Assay |
C |
From FB |
|||
| GO:0005654 |
nucleoplasm |
FB:FBrf0211896 |
IDA: Inferred from Direct Assay |
C |
From FB |
|||
| GO:0005700 |
polytene chromosome |
FB:FBrf0203143 |
IDA: Inferred from Direct Assay |
C |
From FB |
|||
| GO:0006355 |
regulation of transcription, DNA-dependent |
FB:FBrf0174962 |
IMP: Inferred from Mutant Phenotype |
P |
From FB |
|||
| GO:0007064 |
mitotic sister chromatid cohesion |
FB:FBrf0174962 |
IMP: Inferred from Mutant Phenotype |
P |
From FB |
|||
| GO:0007064 |
mitotic sister chromatid cohesion |
FB:FBrf0203143 |
IMP: Inferred from Mutant Phenotype |
P |
From FB |
|||
| GO:0010628 |
positive regulation of gene expression |
FB:FBrf0203143 |
IMP: Inferred from Mutant Phenotype |
P |
From FB |
|||
| GO:0010628 |
positive regulation of gene expression |
FB:FBrf0205879 |
IGI: Inferred from Genetic Interaction |
FB:FBgn0004644 |
P |
From FB |
||
| GO:0035327 |
transcriptionally active chromatin |
FB:FBrf0203017 |
IDA: Inferred from Direct Assay |
C |
From FB |
|||
| GO:0043234 |
protein complex |
FB:FBrf0203143 |
IDA: Inferred from Direct Assay |
C |
From FB |
|||
| GO:0070193 |
synaptonemal complex organization |
FB:FBrf0203143 |
IMP: Inferred from Mutant Phenotype |
P |
From FB |
|||
| GO:0071733 |
transcriptional activation by promoter-enhancer looping |
FB:FBrf0109032 |
IGI: Inferred from Genetic Interaction |
FB:FBgn0004198 |
P |
From FB |
||
|
colocalizes_with |
GO:0000795 |
synaptonemal complex |
FB:FBrf0203143 |
IDA: Inferred from Direct Assay |
C |
From FB |
||
|
colocalizes_with |
GO:0008278 |
cohesin complex |
FB:FBrf0203143 |
IDA: Inferred from Direct Assay |
C |
From FB |
||
|
colocalizes_with |
GO:0008278 |
cohesin complex |
FB:FBrf0211896 |
IDA: Inferred from Direct Assay |
C |
From FB |
| |
| edit table |
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 1.4 Rollins RA et al. (2004) Drosophila nipped-B protein supports sister chromatid cohesion and opposes the stromalin/Scc3 cohesion factor to facilitate long-range activation of the cut gene. Mol Cell Biol 24: 3100-11 PubMed GONUTS page
- ↑ 2.0 2.1 Misulovin Z et al. (2008) Association of cohesin and Nipped-B with transcriptionally active regions of the Drosophila melanogaster genome. Chromosoma 117: 89-102 PubMed GONUTS page
- ↑ 3.00 3.01 3.02 3.03 3.04 3.05 3.06 3.07 3.08 3.09 3.10 3.11 3.12 3.13 Gause M et al. (2008) Functional links between Drosophila Nipped-B and cohesin in somatic and meiotic cells. Chromosoma 117: 51-66 PubMed GONUTS page
- ↑ 4.0 4.1 Hallson G et al. (2008) The Drosophila cohesin subunit Rad21 is a trithorax group (trxG) protein. Proc Natl Acad Sci U S A 105: 12405-10 PubMed GONUTS page
- ↑ 5.0 5.1 Rollins RA et al. (1999) Nipped-B, a Drosophila homologue of chromosomal adherins, participates in activation by remote enhancers in the cut and Ultrabithorax genes. Genetics 152: 577-93 PubMed GONUTS page
- ↑ 6.0 6.1 Gause M et al. (2010) Dosage-sensitive regulation of cohesin chromosome binding and dynamics by Nipped-B, Pds5, and Wapl. Mol Cell Biol 30: 4940-51 PubMed GONUTS page
